Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is ycbL [C]
Identifier: 187927219
GI number: 187927219
Start: 130662
End: 131615
Strand: Reverse
Name: ycbL [C]
Synonym: Rpic_0111
Alternate gene names: 187927219
Gene position: 131615-130662 (Counterclockwise)
Preceding gene: 187927220
Following gene: 187927218
Centisome position: 3.34
GC content: 66.46
Gene sequence:
>954_bases ATGGCCGAACACGACGTCGTCACCTTGCCCAATTCGATGCGCGTGTTCGAGCGCGGCTGGCTGTCGTCGAACAACATCCT GTTTTTCGATGACGAAGCGCACGGCGGTTGCGCGCTGGTCGACTCCGGCTACCTCACGCACGCGCCGCAAACCGTGGCGC TTGTGCAGCACGCGCTGCGAGGCAGGCCGCTGCGCCGTCTGCTGAACACGCACCTGCATTCCGACCACTGCGGCGGCAAT GCAGCGCTGCAGGCCCTCTACGGCAGCCACACGCGCGTACCCGCCGCGCAGATCGACGACGTGCGCCGCTGGGATACCGA CGCCCTCAGCTACGGCCCCACCGGCCAGGAATGCGCACGCTTCGCGTTGCCTGACAGCGATGCCGACGCGGGGCTGTCGG ACGGCATGACGGCCCGACTGGGAGGCTTCGACTGGCAGGTCATCAGCGCGCCGGGGCACGACCCGCACGCGGTCATTCTG TTCAGCCCCGACACGCGCGTGCTGATTTCGGCCGACGCCCTGTGGGAACGTGGCTTCGGCGTGATCTTTCCCGAGCTGGA AGGCGAGAGTGGCTTTGCCGAACAGCAGGCCATTCTTGAGCGCATCGTGCAGCTCGATGCGCTCGTGGTGATTCCCGGAC ACGGCCGGCCGTTCACCAACGTCAACGCCGCGATTGATGCATCGCTCGGGCGGCTTGCGTATCTGCGGGCAGACCCGGAA CGCAACGCGCTGCACGCCATCCGCGTGCTGGTGAAGTTCAAGCTGCTGGAGCAGCAGGCGCTGTCGCACGAGGCGCTGTT TGCGTGGTTCACACAGACCACGCTGATGCCGCGCTTGCACGCACGCTTCTTCGCAGCCCAATCGATGGAGACGTTGCTGG ATGCTGCGATTGCGGCGCTGGTCAAGGCGGGCGCCGCCACCGTCGAACACGGCCGCATCCTGAACCGCGATTGA
Upstream 100 bases:
>100_bases GACCATGAATGACGCGGCTCGTCTGGCCGTGTGGAAAACCTTGCCCGAGCGCGCCTGCGCCTGGCTCAACGACGCGCCCT GCGCCTGACCGCTCATCACC
Downstream 100 bases:
>100_bases CGTGCCGCGCGGTGGCAGTGCCCCGCTACAATGCAGCGACGCCTCTTCTCTTCGCCTGGGCATGCCGAAACCCGCCACAT CCAATCCGCCCGAATCTGCC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Hydroxyacylglutathione Hydrolase; Beta Lactamase; Beta Lactamase Protein; Beta-Lactamase
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MAEHDVVTLPNSMRVFERGWLSSNNILFFDDEAHGGCALVDSGYLTHAPQTVALVQHALRGRPLRRLLNTHLHSDHCGGN AALQALYGSHTRVPAAQIDDVRRWDTDALSYGPTGQECARFALPDSDADAGLSDGMTARLGGFDWQVISAPGHDPHAVIL FSPDTRVLISADALWERGFGVIFPELEGESGFAEQQAILERIVQLDALVVIPGHGRPFTNVNAAIDASLGRLAYLRADPE RNALHAIRVLVKFKLLEQQALSHEALFAWFTQTTLMPRLHARFFAAQSMETLLDAAIAALVKAGAATVEHGRILNRD
Sequences:
>Translated_317_residues MAEHDVVTLPNSMRVFERGWLSSNNILFFDDEAHGGCALVDSGYLTHAPQTVALVQHALRGRPLRRLLNTHLHSDHCGGN AALQALYGSHTRVPAAQIDDVRRWDTDALSYGPTGQECARFALPDSDADAGLSDGMTARLGGFDWQVISAPGHDPHAVIL FSPDTRVLISADALWERGFGVIFPELEGESGFAEQQAILERIVQLDALVVIPGHGRPFTNVNAAIDASLGRLAYLRADPE RNALHAIRVLVKFKLLEQQALSHEALFAWFTQTTLMPRLHARFFAAQSMETLLDAAIAALVKAGAATVEHGRILNRD >Mature_316_residues AEHDVVTLPNSMRVFERGWLSSNNILFFDDEAHGGCALVDSGYLTHAPQTVALVQHALRGRPLRRLLNTHLHSDHCGGNA ALQALYGSHTRVPAAQIDDVRRWDTDALSYGPTGQECARFALPDSDADAGLSDGMTARLGGFDWQVISAPGHDPHAVILF SPDTRVLISADALWERGFGVIFPELEGESGFAEQQAILERIVQLDALVVIPGHGRPFTNVNAAIDASLGRLAYLRADPER NALHAIRVLVKFKLLEQQALSHEALFAWFTQTTLMPRLHARFFAAQSMETLLDAAIAALVKAGAATVEHGRILNRD
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34604; Mature: 34472
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00743 BETA_LACTAMASE_B_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHDVVTLPNSMRVFERGWLSSNNILFFDDEAHGGCALVDSGYLTHAPQTVALVQHALR CCCCCEEECCCHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHC GRPLRRLLNTHLHSDHCGGNAALQALYGSHTRVPAAQIDDVRRWDTDALSYGPTGQECAR CCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH FALPDSDADAGLSDGMTARLGGFDWQVISAPGHDPHAVILFSPDTRVLISADALWERGFG HCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCCEEEEEEHHHHHCCCE VIFPELEGESGFAEQQAILERIVQLDALVVIPGHGRPFTNVNAAIDASLGRLAYLRADPE EEEECCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHCCCCEEEEEECCCC RNALHAIRVLVKFKLLEQQALSHEALFAWFTQTTLMPRLHARFFAAQSMETLLDAAIAAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKAGAATVEHGRILNRD HHHCCHHHHCCEECCCC >Mature Secondary Structure AEHDVVTLPNSMRVFERGWLSSNNILFFDDEAHGGCALVDSGYLTHAPQTVALVQHALR CCCCEEECCCHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHC GRPLRRLLNTHLHSDHCGGNAALQALYGSHTRVPAAQIDDVRRWDTDALSYGPTGQECAR CCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH FALPDSDADAGLSDGMTARLGGFDWQVISAPGHDPHAVILFSPDTRVLISADALWERGFG HCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCCEEEEEEHHHHHCCCE VIFPELEGESGFAEQQAILERIVQLDALVVIPGHGRPFTNVNAAIDASLGRLAYLRADPE EEEECCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHCCCCEEEEEECCCC RNALHAIRVLVKFKLLEQQALSHEALFAWFTQTTLMPRLHARFFAAQSMETLLDAAIAAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKAGAATVEHGRILNRD HHHCCHHHHCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA