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The map label for this gene is kstR2 [H]

Identifier: 187927218

GI number: 187927218

Start: 129923

End: 130600

Strand: Reverse

Name: kstR2 [H]

Synonym: Rpic_0110

Alternate gene names: 187927218

Gene position: 130600-129923 (Counterclockwise)

Preceding gene: 187927219

Following gene: 187927209

Centisome position: 3.31

GC content: 65.93

Gene sequence:

>678_bases
ATGCCGAAACCCGCCACATCCAATCCGCCCGAATCTGCCACCGAAGCCGCCCCTGAAGCCGAAGCACCGCGCCGCAAGCG
CGGCCGCCCCGCGCAGGACGCCAACGAGGGCTTGCGCCGCGCGCTGATCGAGCAATCGGCCCGACTGTTCCGGGAGAAGG
GCTACGGCAACACCACGGTACGCGACATTGCGGCGGCCACGGGCGTGCATGCGGGCAGCTGGTTCTACTACTTCAAGACC
AAGCAGGACATCCTGCAAGCCGTGATCGAACATGGTCTGACCGTGGCGCTGGCGGATATCGAAGCCATCGATATCGAAGA
CCTGCCCCCGCGCGAGGCGATGCGCCAGCTCGTGCGCGCGCACCTCCACACGATCCTTGCGCCCCACCAGGATTTCATTC
CGGTGATGCTGTACGAGTGGCGCTCGCTCGACGCGCAGGCGCAAGAACGCATCATCGCGCTCAAGGATCGGTATGAAGAC
ATCTGGACGCGCGTGATCGACCGCCTGCGCGCCTCCGGCGAATGGGCCCACCCGACGCCTGTCGATCGGCTGCTGATGTT
CGGTGCGCTGAACTGGACGGCGCAGTGGTATCAGGCCGGCGCGGGTATCAGCATCGATGCACTCGCCGATCAGGCGGTGC
TGTTCATCCTGCGTACGCCGCCTCAGCCGGCGGCTTAG

Upstream 100 bases:

>100_bases
GCCACCGTCGAACACGGCCGCATCCTGAACCGCGATTGACGTGCCGCGCGGTGGCAGTGCCCCGCTACAATGCAGCGACG
CCTCTTCTCTTCGCCTGGGC

Downstream 100 bases:

>100_bases
CGTTCCTTAGCGGGCCTCGCCCTCGAACAGCGTCTGGTTGGCGCTGCGCAGCACGTGTTTCTGGATCTTGCCGGTCGCCG
TCATGGGCAGCTTGTCGACC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MPKPATSNPPESATEAAPEAEAPRRKRGRPAQDANEGLRRALIEQSARLFREKGYGNTTVRDIAAATGVHAGSWFYYFKT
KQDILQAVIEHGLTVALADIEAIDIEDLPPREAMRQLVRAHLHTILAPHQDFIPVMLYEWRSLDAQAQERIIALKDRYED
IWTRVIDRLRASGEWAHPTPVDRLLMFGALNWTAQWYQAGAGISIDALADQAVLFILRTPPQPAA

Sequences:

>Translated_225_residues
MPKPATSNPPESATEAAPEAEAPRRKRGRPAQDANEGLRRALIEQSARLFREKGYGNTTVRDIAAATGVHAGSWFYYFKT
KQDILQAVIEHGLTVALADIEAIDIEDLPPREAMRQLVRAHLHTILAPHQDFIPVMLYEWRSLDAQAQERIIALKDRYED
IWTRVIDRLRASGEWAHPTPVDRLLMFGALNWTAQWYQAGAGISIDALADQAVLFILRTPPQPAA
>Mature_224_residues
PKPATSNPPESATEAAPEAEAPRRKRGRPAQDANEGLRRALIEQSARLFREKGYGNTTVRDIAAATGVHAGSWFYYFKTK
QDILQAVIEHGLTVALADIEAIDIEDLPPREAMRQLVRAHLHTILAPHQDFIPVMLYEWRSLDAQAQERIIALKDRYEDI
WTRVIDRLRASGEWAHPTPVDRLLMFGALNWTAQWYQAGAGISIDALADQAVLFILRTPPQPAA

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 25238; Mature: 25107

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPATSNPPESATEAAPEAEAPRRKRGRPAQDANEGLRRALIEQSARLFREKGYGNTTV
CCCCCCCCCCCHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
RDIAAATGVHAGSWFYYFKTKQDILQAVIEHGLTVALADIEAIDIEDLPPREAMRQLVRA
HHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEEEECCEEECCCCCCHHHHHHHHHHH
HLHTILAPHQDFIPVMLYEWRSLDAQAQERIIALKDRYEDIWTRVIDRLRASGEWAHPTP
HHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
VDRLLMFGALNWTAQWYQAGAGISIDALADQAVLFILRTPPQPAA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEEECCCCCCC
>Mature Secondary Structure 
PKPATSNPPESATEAAPEAEAPRRKRGRPAQDANEGLRRALIEQSARLFREKGYGNTTV
CCCCCCCCCCHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
RDIAAATGVHAGSWFYYFKTKQDILQAVIEHGLTVALADIEAIDIEDLPPREAMRQLVRA
HHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEEEECCEEECCCCCCHHHHHHHHHHH
HLHTILAPHQDFIPVMLYEWRSLDAQAQERIIALKDRYEDIWTRVIDRLRASGEWAHPTP
HHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
VDRLLMFGALNWTAQWYQAGAGISIDALADQAVLFILRTPPQPAA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA