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The map label for this gene is ybcL [H]

Identifier: 187927187

GI number: 187927187

Start: 88744

End: 89940

Strand: Reverse

Name: ybcL [H]

Synonym: Rpic_0077

Alternate gene names: 187927187

Gene position: 89940-88744 (Counterclockwise)

Preceding gene: 187927188

Following gene: 187927182

Centisome position: 2.28

GC content: 72.43

Gene sequence:

>1197_bases
ATGCCGGCATCGCTGTGGTGGTTGTGCCTGGGCGCGTTCGCCATCGGCACTGAAGGGTTCATGATCGCCGGCCTGCTGCC
GGTGCTGGCCGCAGACCTGGGCGTGAGCGTGCCGGCGGCTGGGCAGCTCGTCACCGTGTTTGCCGTCACCTATGCCGTGG
GCTCGCCGGTGATGGCGACGCTGCTCGGCAACGTCGACCGCCGACGCGTGCTGATCGGCGCGCTGGCCATCTTTGCGGCA
GGCAACTTGCTGGCGGCCACCGCGCACGGCTTTGGGCAGTTGATGGCGGCGCGCGTGCTGCTGGCGCTGGCGGCCGGCGT
CTTTCTGCCGACGGCCAACGCGGTGGCGACCTCGCTGGTGCCCGCCTCGCGCAGTGGCTCGGCGCTCGCCATCATCACGG
GTGGCGGCACGGTGGCGGTGGCGCTCGGTGTACCGCTGGGGGCGTGGATTGCCGCGCAGGGCGACTGGCGCTCGACGTTC
ATCGCATGCGGTGTGCTGTCGGCACTGGCCACGGCAGGCCTCGCCTTTGGCCTGCCGCGCGCGCTGCCGCACAGCGTGAC
CACGCTGGCGCAACGCCTGAGCGTGGCACGCCGCACCGGCATGCTGGGTGCGCTGGCGGTGTCCGCGTTGTGGGCCGCAG
GCGGCTTTACGTTCTACACCTACGTCGCACCGTTCTTTGTGCAGGGGCTGGGCTTCGCGCCGCAGCATGTGGGCATCGTG
CTGTTCCTGGTCGGCAGCTTTGCGGCGCTGGGCACGGGCCTGGGCGGCCACCTGACCGACCGCGCCGGCGTGGCGCGCGT
GCTGGCGGTCAGCAGCGCGGGCATCGTGCTGGCCTTCTCGGTGCTGTCGCTGTCGGCACAGGTGCTGCACGGCACGGTGG
CCGGCGCCGTCGCCATCGGCGCGGTCGTGCTGTGGGGCATGGCCGGCTGGGGCTTCGGCCCGGCGCAGGCGACGCGGCTG
ATCCGCCTGGCGCCCGATGTGTCGCCGATCACGCTGTCGTTGCATGCGTCGGCCGTGTATGCGGGGATTGCGCTGGGGTC
GAGCGTTGGCGCGCTGGCGCTGGCGCATGGCGGGCCCGGCATGCTGGGATGGGCCGCCGCCGCGTGCCATGTGGTGGCCG
TGGTGCTGTGGCGCATGGGTGGGCGGCATGAGGCGGCGCTGGCCGATGAACCGGCAGCCACGTCGGTCGCACATTGA

Upstream 100 bases:

>100_bases
TGCTGTTGGGCCAGACGGCCAGCTCCACCGCGCGCTGATCCTCGCGGAGCCTCTGCGCTCCGCCCCTCTCTCCGCTTTCC
TCTTCTGACAGGAGCCGACC

Downstream 100 bases:

>100_bases
ACCCCCGGGCGCGGAACGCGACGCGCCAGGTTCTGAACCCGGTGGTCGAGCCTCAAACCGTCGTGCTCCACAGTTCGAGC
TCGACATTTTCGACCTCAAA

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MPASLWWLCLGAFAIGTEGFMIAGLLPVLAADLGVSVPAAGQLVTVFAVTYAVGSPVMATLLGNVDRRRVLIGALAIFAA
GNLLAATAHGFGQLMAARVLLALAAGVFLPTANAVATSLVPASRSGSALAIITGGGTVAVALGVPLGAWIAAQGDWRSTF
IACGVLSALATAGLAFGLPRALPHSVTTLAQRLSVARRTGMLGALAVSALWAAGGFTFYTYVAPFFVQGLGFAPQHVGIV
LFLVGSFAALGTGLGGHLTDRAGVARVLAVSSAGIVLAFSVLSLSAQVLHGTVAGAVAIGAVVLWGMAGWGFGPAQATRL
IRLAPDVSPITLSLHASAVYAGIALGSSVGALALAHGGPGMLGWAAAACHVVAVVLWRMGGRHEAALADEPAATSVAH

Sequences:

>Translated_398_residues
MPASLWWLCLGAFAIGTEGFMIAGLLPVLAADLGVSVPAAGQLVTVFAVTYAVGSPVMATLLGNVDRRRVLIGALAIFAA
GNLLAATAHGFGQLMAARVLLALAAGVFLPTANAVATSLVPASRSGSALAIITGGGTVAVALGVPLGAWIAAQGDWRSTF
IACGVLSALATAGLAFGLPRALPHSVTTLAQRLSVARRTGMLGALAVSALWAAGGFTFYTYVAPFFVQGLGFAPQHVGIV
LFLVGSFAALGTGLGGHLTDRAGVARVLAVSSAGIVLAFSVLSLSAQVLHGTVAGAVAIGAVVLWGMAGWGFGPAQATRL
IRLAPDVSPITLSLHASAVYAGIALGSSVGALALAHGGPGMLGWAAAACHVVAVVLWRMGGRHEAALADEPAATSVAH
>Mature_397_residues
PASLWWLCLGAFAIGTEGFMIAGLLPVLAADLGVSVPAAGQLVTVFAVTYAVGSPVMATLLGNVDRRRVLIGALAIFAAG
NLLAATAHGFGQLMAARVLLALAAGVFLPTANAVATSLVPASRSGSALAIITGGGTVAVALGVPLGAWIAAQGDWRSTFI
ACGVLSALATAGLAFGLPRALPHSVTTLAQRLSVARRTGMLGALAVSALWAAGGFTFYTYVAPFFVQGLGFAPQHVGIVL
FLVGSFAALGTGLGGHLTDRAGVARVLAVSSAGIVLAFSVLSLSAQVLHGTVAGAVAIGAVVLWGMAGWGFGPAQATRLI
RLAPDVSPITLSLHASAVYAGIALGSSVGALALAHGGPGMLGWAAAACHVVAVVLWRMGGRHEAALADEPAATSVAH

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=322, Percent_Identity=36.3354037267081, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI1786595, Length=282, Percent_Identity=27.6595744680851, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI145693198, Length=346, Percent_Identity=28.3236994219653, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787808, Length=361, Percent_Identity=25.7617728531856, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39485; Mature: 39354

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASLWWLCLGAFAIGTEGFMIAGLLPVLAADLGVSVPAAGQLVTVFAVTYAVGSPVMAT
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHH
LLGNVDRRRVLIGALAIFAAGNLLAATAHGFGQLMAARVLLALAAGVFLPTANAVATSLV
HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
PASRSGSALAIITGGGTVAVALGVPLGAWIAAQGDWRSTFIACGVLSALATAGLAFGLPR
CCCCCCCEEEEEECCCEEEEEECCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC
ALPHSVTTLAQRLSVARRTGMLGALAVSALWAAGGFTFYTYVAPFFVQGLGFAPQHVGIV
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
LFLVGSFAALGTGLGGHLTDRAGVARVLAVSSAGIVLAFSVLSLSAQVLHGTVAGAVAIG
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVLWGMAGWGFGPAQATRLIRLAPDVSPITLSLHASAVYAGIALGSSVGALALAHGGPG
HHHHHHHCCCCCCHHHHHHEEEECCCCCCEEEEEEHHHHHHHHHHCCCCCEEEEECCCCC
MLGWAAAACHVVAVVLWRMGGRHEAALADEPAATSVAH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PASLWWLCLGAFAIGTEGFMIAGLLPVLAADLGVSVPAAGQLVTVFAVTYAVGSPVMAT
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHH
LLGNVDRRRVLIGALAIFAAGNLLAATAHGFGQLMAARVLLALAAGVFLPTANAVATSLV
HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
PASRSGSALAIITGGGTVAVALGVPLGAWIAAQGDWRSTFIACGVLSALATAGLAFGLPR
CCCCCCCEEEEEECCCEEEEEECCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC
ALPHSVTTLAQRLSVARRTGMLGALAVSALWAAGGFTFYTYVAPFFVQGLGFAPQHVGIV
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
LFLVGSFAALGTGLGGHLTDRAGVARVLAVSSAGIVLAFSVLSLSAQVLHGTVAGAVAIG
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVLWGMAGWGFGPAQATRLIRLAPDVSPITLSLHASAVYAGIALGSSVGALALAHGGPG
HHHHHHHCCCCCCHHHHHHEEEECCCCCCEEEEEEHHHHHHHHHHCCCCCEEEEECCCCC
MLGWAAAACHVVAVVLWRMGGRHEAALADEPAATSVAH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]