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The map label for this gene is yfgC [C]

Identifier: 187927156

GI number: 187927156

Start: 58107

End: 59051

Strand: Reverse

Name: yfgC [C]

Synonym: Rpic_0046

Alternate gene names: 187927156

Gene position: 59051-58107 (Counterclockwise)

Preceding gene: 187927158

Following gene: 187927155

Centisome position: 1.5

GC content: 65.5

Gene sequence:

>945_bases
ATGCCCCGTGTCACACGCTCCCTGCTGACCGCAATCGGCCTCGCGCTATCTGCGTGGGCAACCGCCATGGACGGCCCGCT
GCCCGTACCCGCCGACGGCGTGAAGCTGGAAGCGCCCACTACCACATCGCCCAACATCCGGCTCGTCATTCCGGCCGAGG
AAATCGATAAGCGCGCGCTGGCCGAATATCAGGGGATCATCGACAACGCGGCCCACGAAGGCGCGCTGGCGCCCGACAAC
GTGCCGGATCTGATCCGCATCCGCGGCATCGTCAAACGGCTCACACCTCAGGCACCGCGCTGGAACCCCGACGCCACGCA
TTGGCAGTGGGACGTCAACTTGATCGGCTCGTCGCAGGTGAACGCGTTCTGCATGCCCGGCGGCAAGATCGCCGTGTTTT
CGGGTCTCCTCGAACAGTTCAAGCTGACGGACGACGAACTCGCCATGGCACTCGGCCACGAGATCGCCCACGCGTTGCGC
GAACACGCCCGCGCCCGCGCCGGCCAGCGTGAAATCACCAACCTGGGCGCCAACGTCATCTCGCAATTGTTCGGCTTCGG
CAACCGGGGCGATACGGACCTGGGTGAAGGCGCCAAGATGCACCTGCTGGCCTTCTCGCGGGCGGAGGAAACCGAGGCCG
ACCTGGTCGGCATGGACATCGCTTCCCGCGCCGGCTACGACCCGCGCGCCGCGCTCACGCTGTGGCAAAAAATGGGATCG
ATCGGCGGGACGGAGCAAAAGCAGTTTCTGTCGACGCACCCGTCGGGACGCACGCGCATGGCCGTGCTGTCGCGCCATTT
GCCCGAAACGCTCACGCTGTTTGCCGACGCCCGCCATATGACGATGGCGAAGCTGCCCGAATATCGGTCGAACATGCAAT
ATCTGGGCGCCGCACCTGTTGATAATGGCGATGAGGCGCCGATGCGGCCGATGCGGCGGCGGTAA

Upstream 100 bases:

>100_bases
CATGCGGCGGGCCGGTGGCGAAGGCGAATGCGGGTTGCCACGTAGCGTGGCGCGCGGCGTTGGCCGATATTATGTCGCAC
GGATCCGTCCCCTCACCTAT

Downstream 100 bases:

>100_bases
TAATGGCTAGGTAATTGGCGCATTGATGTCTGATCAGTCACCGGTTCCATCAAGATGCGCTGGAAAGTCACATCGGTAGC
TGGTTTTGCGCACAGCATAT

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MPRVTRSLLTAIGLALSAWATAMDGPLPVPADGVKLEAPTTTSPNIRLVIPAEEIDKRALAEYQGIIDNAAHEGALAPDN
VPDLIRIRGIVKRLTPQAPRWNPDATHWQWDVNLIGSSQVNAFCMPGGKIAVFSGLLEQFKLTDDELAMALGHEIAHALR
EHARARAGQREITNLGANVISQLFGFGNRGDTDLGEGAKMHLLAFSRAEETEADLVGMDIASRAGYDPRAALTLWQKMGS
IGGTEQKQFLSTHPSGRTRMAVLSRHLPETLTLFADARHMTMAKLPEYRSNMQYLGAAPVDNGDEAPMRPMRRR

Sequences:

>Translated_314_residues
MPRVTRSLLTAIGLALSAWATAMDGPLPVPADGVKLEAPTTTSPNIRLVIPAEEIDKRALAEYQGIIDNAAHEGALAPDN
VPDLIRIRGIVKRLTPQAPRWNPDATHWQWDVNLIGSSQVNAFCMPGGKIAVFSGLLEQFKLTDDELAMALGHEIAHALR
EHARARAGQREITNLGANVISQLFGFGNRGDTDLGEGAKMHLLAFSRAEETEADLVGMDIASRAGYDPRAALTLWQKMGS
IGGTEQKQFLSTHPSGRTRMAVLSRHLPETLTLFADARHMTMAKLPEYRSNMQYLGAAPVDNGDEAPMRPMRRR
>Mature_313_residues
PRVTRSLLTAIGLALSAWATAMDGPLPVPADGVKLEAPTTTSPNIRLVIPAEEIDKRALAEYQGIIDNAAHEGALAPDNV
PDLIRIRGIVKRLTPQAPRWNPDATHWQWDVNLIGSSQVNAFCMPGGKIAVFSGLLEQFKLTDDELAMALGHEIAHALRE
HARARAGQREITNLGANVISQLFGFGNRGDTDLGEGAKMHLLAFSRAEETEADLVGMDIASRAGYDPRAALTLWQKMGSI
GGTEQKQFLSTHPSGRTRMAVLSRHLPETLTLFADARHMTMAKLPEYRSNMQYLGAAPVDNGDEAPMRPMRRR

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=184, Percent_Identity=32.6086956521739, Blast_Score=92, Evalue=9e-19,
Organism=Escherichia coli, GI1788840, Length=161, Percent_Identity=31.055900621118, Blast_Score=65, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322940, Length=233, Percent_Identity=27.8969957081545, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 34255; Mature: 34123

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVTRSLLTAIGLALSAWATAMDGPLPVPADGVKLEAPTTTSPNIRLVIPAEEIDKRAL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEECHHHHHHHHH
AEYQGIIDNAAHEGALAPDNVPDLIRIRGIVKRLTPQAPRWNPDATHWQWDVNLIGSSQV
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCC
NAFCMPGGKIAVFSGLLEQFKLTDDELAMALGHEIAHALREHARARAGQREITNLGANVI
CEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SQLFGFGNRGDTDLGEGAKMHLLAFSRAEETEADLVGMDIASRAGYDPRAALTLWQKMGS
HHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHC
IGGTEQKQFLSTHPSGRTRMAVLSRHLPETLTLFADARHMTMAKLPEYRSNMQYLGAAPV
CCCCHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC
DNGDEAPMRPMRRR
CCCCCCCCCCCCCC
>Mature Secondary Structure 
PRVTRSLLTAIGLALSAWATAMDGPLPVPADGVKLEAPTTTSPNIRLVIPAEEIDKRAL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEECHHHHHHHHH
AEYQGIIDNAAHEGALAPDNVPDLIRIRGIVKRLTPQAPRWNPDATHWQWDVNLIGSSQV
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCC
NAFCMPGGKIAVFSGLLEQFKLTDDELAMALGHEIAHALREHARARAGQREITNLGANVI
CEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SQLFGFGNRGDTDLGEGAKMHLLAFSRAEETEADLVGMDIASRAGYDPRAALTLWQKMGS
HHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHC
IGGTEQKQFLSTHPSGRTRMAVLSRHLPETLTLFADARHMTMAKLPEYRSNMQYLGAAPV
CCCCHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC
DNGDEAPMRPMRRR
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]