Click here to switch to the map view.

The map label for this gene is 187927158

Identifier: 187927158

GI number: 187927158

Start: 60443

End: 61636

Strand: Reverse

Name: 187927158

Synonym: Rpic_0048

Alternate gene names: NA

Gene position: 61636-60443 (Counterclockwise)

Preceding gene: 187927161

Following gene: 187927156

Centisome position: 1.56

GC content: 66.33

Gene sequence:

>1194_bases
ATGAGCAAAACCGTGAGTTTACCGCTTCCCAACGAGGCGGCGCAGGCGCAGTCCGCGCACCTGTTCGCCGTGATCGCCGA
CGCCATTGCGGCCGCCGGGGGCTGGCTTTCGTTCGACCGCTACATGGAACTGGCGCTTTACGCGCCCGGCCTGGGCTATT
ACAGCGGCGGCGCGGCCAAATTCGGCCGCCGCGTGGAGGACGGCGGCGACTTCATCACCGCGCCCGAACTGACGCCGTTC
TTCGGCCGCACCGTGGCGCACCAGCTCGCGCAGGTGCTGCAGGCATTGCCCGAAGGCCAGCGTCACGTGCTGGAATTTGG
CGCCGGCACCGGCAAGTTGGCCGCCGACATCCTTATCGAATTGGATGCGCTGAGCGTGCGGCCCGACAGCTACGGCATCG
TCGAACTCTCCGGCGAGCTGCGCCAGCGCCAGCAGGAGCGTCTGACTGCGCTCGGCCCCGACCTGGGCGCCCTGGCGCAG
TGGCACGACACATTGCCCGCGCCGTTCACCGGCGTGATGATCGGTAATGAAGTGCTCGATGCGATGCCCGTGTCGCTGTG
GGCGCGGCGCGGCGGCATGTGGCACCAGCGCGGCGTGATGCTAGATGCGGAGCACGGCCTGCAATGGGAAGACCGGCTTG
TTGATCCGTCAGAGGTCCCAGCCAAGCTGGCCGCCCTGCCCGGCACGGATGATTTCGTTACCGAATCGCATGAGGCCGCC
GAGGGCTTCATCCGCAGCACCGGCGCAGCGCTTGAACGCGGCCTGCTGCTGCTGATCGACTACGGTTTCCCGGCTGCCGA
GTACTACCACGCGCACCGCGCCAACGGCACGCTCATGTGCCACTACCGCCAGCACGCGCATGACGATCCGTTCTGGCTGC
CAGGCCTGCAGGACATCACCGCGCACGTCGATTTTTCGGGGATTGCCCAGGCGGGACAGGAAGCCGGGCTGGAACTGCTC
GGCTACACGAGCCAGGCGCGCTTTCTGTTGAGCGCCGGCGTGGGTGAGCTGCTGATGACACTTGATCCGTCCGATCCGAT
GCAGTTTCTGCCGGCGGCCAATGCCGTGCAGAAACTGCTGTCGGAAGCAGAAATGGGCGAGCTGTTCAAGGCCATCGCGC
TGGGCAAAGGCATCGATGCAGCACTGCCGCTGACCGGCTTTGCCGATGCCGACCGCTCGAACCGCTTGGGTTAG

Upstream 100 bases:

>100_bases
TGCGCCTGTGACGAGAGCGATGCGCTGCTGTGTAGCGGATTCTGCGGTCGATTCCGCAGTTGACTGGTTGAGCGTCTGCG
CCATTGTTTACAATTCGCCG

Downstream 100 bases:

>100_bases
ACGATCAGGCTGACGCGGCCTTGGCCGCTTTGGCCTCCAAGGCGCGTTCGTTCTGCTCGGCTTCGTAGCGGCCGATCGTG
CCGCGCATCCACCACAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSKTVSLPLPNEAAQAQSAHLFAVIADAIAAAGGWLSFDRYMELALYAPGLGYYSGGAAKFGRRVEDGGDFITAPELTPF
FGRTVAHQLAQVLQALPEGQRHVLEFGAGTGKLAADILIELDALSVRPDSYGIVELSGELRQRQQERLTALGPDLGALAQ
WHDTLPAPFTGVMIGNEVLDAMPVSLWARRGGMWHQRGVMLDAEHGLQWEDRLVDPSEVPAKLAALPGTDDFVTESHEAA
EGFIRSTGAALERGLLLLIDYGFPAAEYYHAHRANGTLMCHYRQHAHDDPFWLPGLQDITAHVDFSGIAQAGQEAGLELL
GYTSQARFLLSAGVGELLMTLDPSDPMQFLPAANAVQKLLSEAEMGELFKAIALGKGIDAALPLTGFADADRSNRLG

Sequences:

>Translated_397_residues
MSKTVSLPLPNEAAQAQSAHLFAVIADAIAAAGGWLSFDRYMELALYAPGLGYYSGGAAKFGRRVEDGGDFITAPELTPF
FGRTVAHQLAQVLQALPEGQRHVLEFGAGTGKLAADILIELDALSVRPDSYGIVELSGELRQRQQERLTALGPDLGALAQ
WHDTLPAPFTGVMIGNEVLDAMPVSLWARRGGMWHQRGVMLDAEHGLQWEDRLVDPSEVPAKLAALPGTDDFVTESHEAA
EGFIRSTGAALERGLLLLIDYGFPAAEYYHAHRANGTLMCHYRQHAHDDPFWLPGLQDITAHVDFSGIAQAGQEAGLELL
GYTSQARFLLSAGVGELLMTLDPSDPMQFLPAANAVQKLLSEAEMGELFKAIALGKGIDAALPLTGFADADRSNRLG
>Mature_396_residues
SKTVSLPLPNEAAQAQSAHLFAVIADAIAAAGGWLSFDRYMELALYAPGLGYYSGGAAKFGRRVEDGGDFITAPELTPFF
GRTVAHQLAQVLQALPEGQRHVLEFGAGTGKLAADILIELDALSVRPDSYGIVELSGELRQRQQERLTALGPDLGALAQW
HDTLPAPFTGVMIGNEVLDAMPVSLWARRGGMWHQRGVMLDAEHGLQWEDRLVDPSEVPAKLAALPGTDDFVTESHEAAE
GFIRSTGAALERGLLLLIDYGFPAAEYYHAHRANGTLMCHYRQHAHDDPFWLPGLQDITAHVDFSGIAQAGQEAGLELLG
YTSQARFLLSAGVGELLMTLDPSDPMQFLPAANAVQKLLSEAEMGELFKAIALGKGIDAALPLTGFADADRSNRLG

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI193211224, Length=408, Percent_Identity=27.4509803921569, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24645885, Length=413, Percent_Identity=26.8765133171913, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42637; Mature: 42506

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTVSLPLPNEAAQAQSAHLFAVIADAIAAAGGWLSFDRYMELALYAPGLGYYSGGAAK
CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
FGRRVEDGGDFITAPELTPFFGRTVAHQLAQVLQALPEGQRHVLEFGAGTGKLAADILIE
HCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHEE
LDALSVRPDSYGIVELSGELRQRQQERLTALGPDLGALAQWHDTLPAPFTGVMIGNEVLD
EEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECHHHHH
AMPVSLWARRGGMWHQRGVMLDAEHGLQWEDRLVDPSEVPAKLAALPGTDDFVTESHEAA
HHHHHHHHHCCCCCHHCCEEEECCCCCCHHHCCCCHHHCCHHHHCCCCCCHHHCCCHHHH
EGFIRSTGAALERGLLLLIDYGFPAAEYYHAHRANGTLMCHYRQHAHDDPFWLPGLQDIT
HHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCHHHHH
AHVDFSGIAQAGQEAGLELLGYTSQARFLLSAGVGELLMTLDPSDPMQFLPAANAVQKLL
HHCCHHHHHHHHHHCCCEEECCCHHHHHHHHCCHHHEEEEECCCCCHHHHHHHHHHHHHH
SEAEMGELFKAIALGKGIDAALPLTGFADADRSNRLG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKTVSLPLPNEAAQAQSAHLFAVIADAIAAAGGWLSFDRYMELALYAPGLGYYSGGAAK
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
FGRRVEDGGDFITAPELTPFFGRTVAHQLAQVLQALPEGQRHVLEFGAGTGKLAADILIE
HCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHEE
LDALSVRPDSYGIVELSGELRQRQQERLTALGPDLGALAQWHDTLPAPFTGVMIGNEVLD
EEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECHHHHH
AMPVSLWARRGGMWHQRGVMLDAEHGLQWEDRLVDPSEVPAKLAALPGTDDFVTESHEAA
HHHHHHHHHCCCCCHHCCEEEECCCCCCHHHCCCCHHHCCHHHHCCCCCCHHHCCCHHHH
EGFIRSTGAALERGLLLLIDYGFPAAEYYHAHRANGTLMCHYRQHAHDDPFWLPGLQDIT
HHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCHHHHH
AHVDFSGIAQAGQEAGLELLGYTSQARFLLSAGVGELLMTLDPSDPMQFLPAANAVQKLL
HHCCHHHHHHHHHHCCCEEECCCHHHHHHHHCCHHHEEEEECCCCCHHHHHHHHHHHHHH
SEAEMGELFKAIALGKGIDAALPLTGFADADRSNRLG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA