Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927133
Identifier: 187927133
GI number: 187927133
Start: 34060
End: 34758
Strand: Reverse
Name: 187927133
Synonym: Rpic_0023
Alternate gene names: NA
Gene position: 34758-34060 (Counterclockwise)
Preceding gene: 187927135
Following gene: 187927132
Centisome position: 0.88
GC content: 67.38
Gene sequence:
>699_bases ATGACGACACCCCGTGCTCCGACGCCCGCCACGCAACTGCAAGGCCATGCGTGGTACACCGCGCTGGCGCCTGAACACCA GGCCCTGGCCGGGCGAGAAACCCTGCTGCAGGCCTTCGAGCCCGGTGCCTTCATTGCCCGCCGCGGCGAACCGTCCCGCT ACTGGATCGGCGTGGACACCGGGCTCATCAAGCTGGCCGTGTACACCTCCGACGGGCGCGGCTGCACGTTCTCCGGCGTG CCTGCGGGCGGCTGGTGCGGCGAGGGCAGCGTCATCAAGCGCGAAGACCGCCGCTATGACGTGATCGCCATTCGCGCCTC GCACGTGCTGCTGGTGCCCGAACCCGTGTTCAATACGCTGCTCGCGCAGAGCTTGCCGTTTGCCAGCTTTGTGGTGCGCC AGCTCAACGAACGCATGGGTCAGTTCATTGCCACCGTGCAGAACGACCGCCTGCTGAGCGCCGATGCGCGCGTGGCGCAA GCGATTGCGCAGCTGTTCCACCCTGCCCTGTACCCGCGCACGAGCACCGTGCTGGAGCTGTCACAAGAAGAGATCGGGCT GCTGACGGGGCTGTCGCGCCAGCGCGTGAACCGCGCGCTGCAACGGCTGGCCGAAGGCGGAATGATCGCGCTGTCATACC AGACCATTCGCGTGACCGACCTCGAGCGGCTGCGGCTCTTCGGCCTGTCGGAGCTGTAA
Upstream 100 bases:
>100_bases CCCGGAAACCCGCGCCACCCGAAGGCTGACGGGTTTCTTACAAAGCGAAGGCAGAGCCCCACGCGCCCCCGCCACCCTTG ACCGTGTGCCTTCGCCTGCC
Downstream 100 bases:
>100_bases GCGCCGCGCCCGACTCTGTCACCCGGGCGACATTGCCCCTGTTACGCACAGACATAGAATCCTGCAACAGTCGCGCTTCA TCCGCCGCCTTATCGGTCAG
Product: Crp/Fnr family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Regulatory Protein; Transcription Regulator Protein; Crp/Fnr Family Transcriptional Regulator; Cyclic-Nucleotide-Gated Cation Channel; CNMP Regulatory Protein; Transcriptional Regulator Crp Family; HTH Crp Family Transcriptional Regulator; CAMP-Dependent Transcriptional Regulator
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTTPRAPTPATQLQGHAWYTALAPEHQALAGRETLLQAFEPGAFIARRGEPSRYWIGVDTGLIKLAVYTSDGRGCTFSGV PAGGWCGEGSVIKREDRRYDVIAIRASHVLLVPEPVFNTLLAQSLPFASFVVRQLNERMGQFIATVQNDRLLSADARVAQ AIAQLFHPALYPRTSTVLELSQEEIGLLTGLSRQRVNRALQRLAEGGMIALSYQTIRVTDLERLRLFGLSEL
Sequences:
>Translated_232_residues MTTPRAPTPATQLQGHAWYTALAPEHQALAGRETLLQAFEPGAFIARRGEPSRYWIGVDTGLIKLAVYTSDGRGCTFSGV PAGGWCGEGSVIKREDRRYDVIAIRASHVLLVPEPVFNTLLAQSLPFASFVVRQLNERMGQFIATVQNDRLLSADARVAQ AIAQLFHPALYPRTSTVLELSQEEIGLLTGLSRQRVNRALQRLAEGGMIALSYQTIRVTDLERLRLFGLSEL >Mature_231_residues TTPRAPTPATQLQGHAWYTALAPEHQALAGRETLLQAFEPGAFIARRGEPSRYWIGVDTGLIKLAVYTSDGRGCTFSGVP AGGWCGEGSVIKREDRRYDVIAIRASHVLLVPEPVFNTLLAQSLPFASFVVRQLNERMGQFIATVQNDRLLSADARVAQA IAQLFHPALYPRTSTVLELSQEEIGLLTGLSRQRVNRALQRLAEGGMIALSYQTIRVTDLERLRLFGLSEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25559; Mature: 25427
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPRAPTPATQLQGHAWYTALAPEHQALAGRETLLQAFEPGAFIARRGEPSRYWIGVDT CCCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECC GLIKLAVYTSDGRGCTFSGVPAGGWCGEGSVIKREDRRYDVIAIRASHVLLVPEPVFNTL CEEEEEEEECCCCCCEECCCCCCCCCCCCCEEECCCCCEEEEEEEECEEEEECCHHHHHH LAQSLPFASFVVRQLNERMGQFIATVQNDRLLSADARVAQAIAQLFHPALYPRTSTVLEL HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHCCCCCHHHHHH SQEEIGLLTGLSRQRVNRALQRLAEGGMIALSYQTIRVTDLERLRLFGLSEL HHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHCCCCC >Mature Secondary Structure TTPRAPTPATQLQGHAWYTALAPEHQALAGRETLLQAFEPGAFIARRGEPSRYWIGVDT CCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECC GLIKLAVYTSDGRGCTFSGVPAGGWCGEGSVIKREDRRYDVIAIRASHVLLVPEPVFNTL CEEEEEEEECCCCCCEECCCCCCCCCCCCCEEECCCCCEEEEEEEECEEEEECCHHHHHH LAQSLPFASFVVRQLNERMGQFIATVQNDRLLSADARVAQAIAQLFHPALYPRTSTVLEL HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHCCCCCHHHHHH SQEEIGLLTGLSRQRVNRALQRLAEGGMIALSYQTIRVTDLERLRLFGLSEL HHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA