Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is pgl [H]
Identifier: 187927135
GI number: 187927135
Start: 36686
End: 38254
Strand: Reverse
Name: pgl [H]
Synonym: Rpic_0025
Alternate gene names: 187927135
Gene position: 38254-36686 (Counterclockwise)
Preceding gene: 187927137
Following gene: 187927133
Centisome position: 0.97
GC content: 67.43
Gene sequence:
>1569_bases ATGGCCGAGCTTTTAATCGCCAAAGCGCAACGCAGCAGCAGCGCATACACACAACCCACACCGGCACCGATTCCGCCCGA CGCCCCGCGGCACGCACGCGGCATGCACGGCGCCGCGCTGGTGATGGCCGCCGCGCTGTCGCTGGGGCTCAGTGCCTGCG GTGGCGGCGAAGATGCCGGTACCACGACCCCACCGACGAACAACAACACGCCAGCCCCCACCCCGTCACCCGCGCCCACA CCGGCGCCCAAACCGACGCCATCGCCATCACCTGCGCCCACACCAACGCCGGCGCCCACACCTGCGCCAGCGCCGGCGAC CTATTCCGTGGGCGGTACCGTCAGCGGGCTGACCAGCGGCAAGTCCGTCACGCTGCTGGACAACGGCGGCGATGCGGTTG TCGTCAACGCCAATGGCAGCTTCAACTTCCCGACCAAGCTCGCGCAGGGCAAGCCCTATGCAGCGACGGTCGGAACGCGG CCTTCGGGTGAGAACTGCACCGTCACCAACGGCAGCGGCACCGTGGGCACCAGCAACGTGACCACCATTGCGGTGGCCTG CACGCCCAAGCCCCTGTTCGGCTATGCGGTCAACTCGAACGACGGCACCATCTCGGCCTTCACGCTGGATGCGACCACCG GCATGCCCACCGCAGTCGGCACGGCAGTGGCGGTGGGAGCAGGGCCGCTGTCGCTGACCATCGACCCGGCGGGCAAGTTC GTCTACGTGGCCAACGCCAACGCCAACACCGTCACCACGCTCTCCATCAATGCCGATACCGGACTGCTCACGGTAGTCGG CTCGGCCACACCCACGGGCGTGCAGCCCTATAGCATTGCGCGCACGCCCAACGGCAAGTTCGCATACACGACCAACTATG GAGACAACACGCTGTCGGCGTTCTCCGTCAACACGGGCACCGGTGCACTGACCGCGCTCGCGCCCATCACCGCCGGGGCC AACCCGTACACGGTCGCCATCAACAGCGCAGGCACCTTCGCCTACGTGGTCAACGCCAACAGCGGCGCCACGCCGGGCAC GGCCATGGCGTTTGCCGTCAACAACACAACGGGCGCACTCACGCAGGTGGGCACCACGGTCAACACGGGCAACACGCCGC AGTTCATCGCGGTCAACTCGGCGGGCACCTACGCCTACGTGACCAACGCCGCAGACAACACCATCAACGTCTACAGCATC AGCAACACCGGGGCGCTCACCGCATCGGGCACACCGGTGGCGGCAGGCACCAACCCGTACTACATCGCCATCGCACCGTC GGGCGGCTTCATGTACGTGACCAACGTGCTGGCCAACACGGTCAGCGTCTTCAGCATCAACCCGTCCAACGGCGCCCTCA CGCTGGTCGACACCACGCCCACCGGCAACGCGCCCGTGACCGTGCTCGTCAACCCCGCCGGCACCTTCGCCTACGTGGTC AACGCCGTGGACAACAGCGTCAGCGCGTACAGCATCAACAGCACCACCGGCAAGCTGACCGCCGTGGCAAGCGGGTCAGC CGCCACCGGCAACATCCCGCGCGGGATGGCGATCGTGGCGGTGCCGTGA
Upstream 100 bases:
>100_bases CCGTCAATTGGCCTATGTCGGCATGTGCCCAGGTACCTATGCTTCGGGAAACGCGAGTCAACAAATCTACAAACCGCGAC AACCGGAACGGGGGGGAGCC
Downstream 100 bases:
>100_bases GGCTGGGCTGAATCGATTTGGTGGAATGCAAAAAGCCCCTCGCGAAGGCGAGGGGCTCTGTTTTATTGCGGGGGTCCCAC GCGGCAGCCCCGGCCAGCCT
Product: 40-residue YVTN family beta-propeller repeat-containing protein
Products: NA
Alternate protein names: 6-P-gluconolactonase [H]
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MAELLIAKAQRSSSAYTQPTPAPIPPDAPRHARGMHGAALVMAAALSLGLSACGGGEDAGTTTPPTNNNTPAPTPSPAPT PAPKPTPSPSPAPTPTPAPTPAPAPATYSVGGTVSGLTSGKSVTLLDNGGDAVVVNANGSFNFPTKLAQGKPYAATVGTR PSGENCTVTNGSGTVGTSNVTTIAVACTPKPLFGYAVNSNDGTISAFTLDATTGMPTAVGTAVAVGAGPLSLTIDPAGKF VYVANANANTVTTLSINADTGLLTVVGSATPTGVQPYSIARTPNGKFAYTTNYGDNTLSAFSVNTGTGALTALAPITAGA NPYTVAINSAGTFAYVVNANSGATPGTAMAFAVNNTTGALTQVGTTVNTGNTPQFIAVNSAGTYAYVTNAADNTINVYSI SNTGALTASGTPVAAGTNPYYIAIAPSGGFMYVTNVLANTVSVFSINPSNGALTLVDTTPTGNAPVTVLVNPAGTFAYVV NAVDNSVSAYSINSTTGKLTAVASGSAATGNIPRGMAIVAVP
Sequences:
>Translated_522_residues MAELLIAKAQRSSSAYTQPTPAPIPPDAPRHARGMHGAALVMAAALSLGLSACGGGEDAGTTTPPTNNNTPAPTPSPAPT PAPKPTPSPSPAPTPTPAPTPAPAPATYSVGGTVSGLTSGKSVTLLDNGGDAVVVNANGSFNFPTKLAQGKPYAATVGTR PSGENCTVTNGSGTVGTSNVTTIAVACTPKPLFGYAVNSNDGTISAFTLDATTGMPTAVGTAVAVGAGPLSLTIDPAGKF VYVANANANTVTTLSINADTGLLTVVGSATPTGVQPYSIARTPNGKFAYTTNYGDNTLSAFSVNTGTGALTALAPITAGA NPYTVAINSAGTFAYVVNANSGATPGTAMAFAVNNTTGALTQVGTTVNTGNTPQFIAVNSAGTYAYVTNAADNTINVYSI SNTGALTASGTPVAAGTNPYYIAIAPSGGFMYVTNVLANTVSVFSINPSNGALTLVDTTPTGNAPVTVLVNPAGTFAYVV NAVDNSVSAYSINSTTGKLTAVASGSAATGNIPRGMAIVAVP >Mature_521_residues AELLIAKAQRSSSAYTQPTPAPIPPDAPRHARGMHGAALVMAAALSLGLSACGGGEDAGTTTPPTNNNTPAPTPSPAPTP APKPTPSPSPAPTPTPAPTPAPAPATYSVGGTVSGLTSGKSVTLLDNGGDAVVVNANGSFNFPTKLAQGKPYAATVGTRP SGENCTVTNGSGTVGTSNVTTIAVACTPKPLFGYAVNSNDGTISAFTLDATTGMPTAVGTAVAVGAGPLSLTIDPAGKFV YVANANANTVTTLSINADTGLLTVVGSATPTGVQPYSIARTPNGKFAYTTNYGDNTLSAFSVNTGTGALTALAPITAGAN PYTVAINSAGTFAYVVNANSGATPGTAMAFAVNNTTGALTQVGTTVNTGNTPQFIAVNSAGTYAYVTNAADNTINVYSIS NTGALTASGTPVAAGTNPYYIAIAPSGGFMYVTNVLANTVSVFSINPSNGALTLVDTTPTGNAPVTVLVNPAGTFAYVVN AVDNSVSAYSINSTTGKLTAVASGSAATGNIPRGMAIVAVP
Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate [H]
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cycloisomerase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022528 - InterPro: IPR019405 - InterPro: IPR011045 - InterPro: IPR015943 [H]
Pfam domain/function: PF10282 DUF2394 [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 51176; Mature: 51045
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELLIAKAQRSSSAYTQPTPAPIPPDAPRHARGMHGAALVMAAALSLGLSACGGGEDAG CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCHHHCCCCCCCC TTTPPTNNNTPAPTPSPAPTPAPKPTPSPSPAPTPTPAPTPAPAPATYSVGGTVSGLTSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCC KSVTLLDNGGDAVVVNANGSFNFPTKLAQGKPYAATVGTRPSGENCTVTNGSGTVGTSNV CEEEEEECCCCEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCE TTIAVACTPKPLFGYAVNSNDGTISAFTLDATTGMPTAVGTAVAVGAGPLSLTIDPAGKF EEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCHHHCEEEEECCCCEEEEECCCCCE VYVANANANTVTTLSINADTGLLTVVGSATPTGVQPYSIARTPNGKFAYTTNYGDNTLSA EEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCEEE FSVNTGTGALTALAPITAGANPYTVAINSAGTFAYVVNANSGATPGTAMAFAVNNTTGAL EEEECCCCCEEEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCEEEEEEECCCCCE TQVGTTVNTGNTPQFIAVNSAGTYAYVTNAADNTINVYSISNTGALTASGTPVAAGTNPY EECCCEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEECCCEEECCCCCE YIAIAPSGGFMYVTNVLANTVSVFSINPSNGALTLVDTTPTGNAPVTVLVNPAGTFAYVV EEEEECCCCEEEEEHHHHCEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEE NAVDNSVSAYSINSTTGKLTAVASGSAATGNIPRGMAIVAVP EHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEC >Mature Secondary Structure AELLIAKAQRSSSAYTQPTPAPIPPDAPRHARGMHGAALVMAAALSLGLSACGGGEDAG CCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCHHHCCCCCCCC TTTPPTNNNTPAPTPSPAPTPAPKPTPSPSPAPTPTPAPTPAPAPATYSVGGTVSGLTSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCC KSVTLLDNGGDAVVVNANGSFNFPTKLAQGKPYAATVGTRPSGENCTVTNGSGTVGTSNV CEEEEEECCCCEEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCE TTIAVACTPKPLFGYAVNSNDGTISAFTLDATTGMPTAVGTAVAVGAGPLSLTIDPAGKF EEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCHHHCEEEEECCCCEEEEECCCCCE VYVANANANTVTTLSINADTGLLTVVGSATPTGVQPYSIARTPNGKFAYTTNYGDNTLSA EEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCEEE FSVNTGTGALTALAPITAGANPYTVAINSAGTFAYVVNANSGATPGTAMAFAVNNTTGAL EEEECCCCCEEEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCEEEEEEECCCCCE TQVGTTVNTGNTPQFIAVNSAGTYAYVTNAADNTINVYSISNTGALTASGTPVAAGTNPY EECCCEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEECCCEEECCCCCE YIAIAPSGGFMYVTNVLANTVSVFSINPSNGALTLVDTTPTGNAPVTVLVNPAGTFAYVV EEEEECCCCEEEEEHHHHCEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEE NAVDNSVSAYSINSTTGKLTAVASGSAATGNIPRGMAIVAVP EHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA