| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187935691
Identifier: 187935691
GI number: 187935691
Start: 1621629
End: 1621775
Strand: Reverse
Name: 187935691
Synonym: CLL_A1566
Alternate gene names: NA
Gene position: 1621775-1621629 (Counterclockwise)
Preceding gene: 187932497
Following gene: 187932816
Centisome position: 42.67
GC content: 27.21
Gene sequence:
>147_bases ATGAGTAATGATAAAATATTAGCTCGTGAAAAGGCTAAAGAAATGATGATTGCAGGGGATTCTTTTGACACAATCATGGA GAAAACTAATTTAAGATTAAAAGACTTAAAAAAAATTAGGAGAAAAGAAATAGATACTCACTTTTAA
Upstream 100 bases:
>100_bases AATTAGTATATACATTACTTAAATTAAATGTAATGTATATATTATTTTTCTAAGGAAAAGATAAATACTGATTACAGTGT TACAGGAGGAAAATTCAGAT
Downstream 100 bases:
>100_bases AACACTTACCCCTATATTTAAAGCTGTTTTTAGTCTTTAGTTATAGAGTTAATACTGAATTTTCACAATTCAGTATTAAC TCTATAACAATTAACATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 47
Protein sequence:
>48_residues MSNDKILAREKAKEMMIAGDSFDTIMEKTNLRLKDLKKIRRKEIDTHF
Sequences:
>Translated_48_residues MSNDKILAREKAKEMMIAGDSFDTIMEKTNLRLKDLKKIRRKEIDTHF >Mature_47_residues SNDKILAREKAKEMMIAGDSFDTIMEKTNLRLKDLKKIRRKEIDTHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5711; Mature: 5580
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDKILAREKAKEMMIAGDSFDTIMEKTNLRLKDLKKIRRKEIDTHF CCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SNDKILAREKAKEMMIAGDSFDTIMEKTNLRLKDLKKIRRKEIDTHF CCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA