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The map label for this gene is degT [H]

Identifier: 187935474

GI number: 187935474

Start: 3554939

End: 3556120

Strand: Reverse

Name: degT [H]

Synonym: CLL_A3372

Alternate gene names: 187935474

Gene position: 3556120-3554939 (Counterclockwise)

Preceding gene: 187933114

Following gene: 187934623

Centisome position: 93.57

GC content: 29.19

Gene sequence:

>1182_bases
ATGAATATTCCATTAATTGATTTAAAAGCTCAATATAAGTCTATTTCTGAAGATTTAGATAGAGTAACTAAGGAAGTATT
ATCTTCTGCAAATTATATTATGGGAAAAAATGTATCTGATTTTGAAAAGGATTTTGCAGATTATATAGGCGTTAAGCATG
CTATTTCAGTAGGAAATGGGACAGATGCATTAGTTATTGCATTAAAATCTTTAGGAATTGGAGCAGGTGATGAAGTAATA
ACTTCAACATTTACTTACTTTGCCTCAGCTGAATGTATATCTGCTGTAGGAGCAAAGCCAGTTTTTGTAGATGCAGAAAA
AGATACTTTTAATATAGATCCAAGCAAAATAGAAGAAAAAATTACAGAAAAAACAAAAGCAATTATACCTGTTCATATCT
TTGGTCAAAGTGCTGATATGGATGAAATAAATAAAATAGCTAAAAAACATAATTTAAAAGTTATTGAAGATGCTTGTCAA
GCAGTTGGAGCTAAATATAAAGGAAAAATGATAGGGGCATTAAGTGATATGGCTTGTTTTTCATTCTTCCCAACAAAGAA
TCTTTCATGTGCTGGCGATGGTGGTATGATAGTAACATCTGATGATAATGTTGCAACTATAGCTAGAGCATTAAGAACTC
ATGGAAGTGGAGAAACAGGACAAAAAGCATATAATTTATTAAATAATATAAATGAAGACATAGATAAATCTAATACTGGA
GATGATACAGTATATAATCCATTAAAGTACTACAATTATTTAATAGGATATAACTCTAGATTAGATGCTATTCAAGCAGC
AATATTGAAAGTAAAATTGCCTCATTTAGATAAATGGAATTCAAAGAGAAAAGAAATAGCAAAAATATATGATGAAAACT
TTAAAGATTCAAAAGTCGTTACACCAAGTGTTAGAGAAGAAAATGAATCAGTATATCATCAATATGTATTACAAACAGAA
GACAGAGAAAAAATGTTAAATAAGCTTAAAGATAAAGGTGTGGCAGCAGGGGTATATTATCCAGTTCCATTACATTTACA
AAAAGTATATCAAAATCTTGGATATAAAGAAGGGGATATGCCAGTTGCAGAATATCTTTCACATAGAACATTTGCAATTC
CTGTTTATCCAGAATTAACAGAAGAACAAATAAAATATATAATTGATTCTATAAAGGAATAG

Upstream 100 bases:

>100_bases
TAATTAATATTTAGAGTTTAAATGTTTGTTATAATTTAGTAGAAATGAATTATCAAAACAACAAATTGGTAATATAAGTA
AAATTGAAGGAGCGAGGAAA

Downstream 100 bases:

>100_bases
AGAGGTATAATTTATGGATAAAAAGTATTTTGTACATGAATCCAGTTATATAGATGATAATGTTGAAATAGGAGAAGGCA
CAAAAATATGGCATTTTTCC

Product: erythromycin biosynthesis sensory transduction protein eryC1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MNIPLIDLKAQYKSISEDLDRVTKEVLSSANYIMGKNVSDFEKDFADYIGVKHAISVGNGTDALVIALKSLGIGAGDEVI
TSTFTYFASAECISAVGAKPVFVDAEKDTFNIDPSKIEEKITEKTKAIIPVHIFGQSADMDEINKIAKKHNLKVIEDACQ
AVGAKYKGKMIGALSDMACFSFFPTKNLSCAGDGGMIVTSDDNVATIARALRTHGSGETGQKAYNLLNNINEDIDKSNTG
DDTVYNPLKYYNYLIGYNSRLDAIQAAILKVKLPHLDKWNSKRKEIAKIYDENFKDSKVVTPSVREENESVYHQYVLQTE
DREKMLNKLKDKGVAAGVYYPVPLHLQKVYQNLGYKEGDMPVAEYLSHRTFAIPVYPELTEEQIKYIIDSIKE

Sequences:

>Translated_393_residues
MNIPLIDLKAQYKSISEDLDRVTKEVLSSANYIMGKNVSDFEKDFADYIGVKHAISVGNGTDALVIALKSLGIGAGDEVI
TSTFTYFASAECISAVGAKPVFVDAEKDTFNIDPSKIEEKITEKTKAIIPVHIFGQSADMDEINKIAKKHNLKVIEDACQ
AVGAKYKGKMIGALSDMACFSFFPTKNLSCAGDGGMIVTSDDNVATIARALRTHGSGETGQKAYNLLNNINEDIDKSNTG
DDTVYNPLKYYNYLIGYNSRLDAIQAAILKVKLPHLDKWNSKRKEIAKIYDENFKDSKVVTPSVREENESVYHQYVLQTE
DREKMLNKLKDKGVAAGVYYPVPLHLQKVYQNLGYKEGDMPVAEYLSHRTFAIPVYPELTEEQIKYIIDSIKE
>Mature_393_residues
MNIPLIDLKAQYKSISEDLDRVTKEVLSSANYIMGKNVSDFEKDFADYIGVKHAISVGNGTDALVIALKSLGIGAGDEVI
TSTFTYFASAECISAVGAKPVFVDAEKDTFNIDPSKIEEKITEKTKAIIPVHIFGQSADMDEINKIAKKHNLKVIEDACQ
AVGAKYKGKMIGALSDMACFSFFPTKNLSCAGDGGMIVTSDDNVATIARALRTHGSGETGQKAYNLLNNINEDIDKSNTG
DDTVYNPLKYYNYLIGYNSRLDAIQAAILKVKLPHLDKWNSKRKEIAKIYDENFKDSKVVTPSVREENESVYHQYVLQTE
DREKMLNKLKDKGVAAGVYYPVPLHLQKVYQNLGYKEGDMPVAEYLSHRTFAIPVYPELTEEQIKYIIDSIKE

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=387, Percent_Identity=34.1085271317829, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI2367285, Length=338, Percent_Identity=30.7692307692308, Blast_Score=157, Evalue=9e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43688; Mature: 43688

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIPLIDLKAQYKSISEDLDRVTKEVLSSANYIMGKNVSDFEKDFADYIGVKHAISVGNG
CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCHHHEEECCCC
TDALVIALKSLGIGAGDEVITSTFTYFASAECISAVGAKPVFVDAEKDTFNIDPSKIEEK
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHH
ITEKTKAIIPVHIFGQSADMDEINKIAKKHNLKVIEDACQAVGAKYKGKMIGALSDMACF
HHHHHHEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
SFFPTKNLSCAGDGGMIVTSDDNVATIARALRTHGSGETGQKAYNLLNNINEDIDKSNTG
HHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
DDTVYNPLKYYNYLIGYNSRLDAIQAAILKVKLPHLDKWNSKRKEIAKIYDENFKDSKVV
CCHHHCHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCCCC
TPSVREENESVYHQYVLQTEDREKMLNKLKDKGVAAGVYYPVPLHLQKVYQNLGYKEGDM
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCC
PVAEYLSHRTFAIPVYPELTEEQIKYIIDSIKE
CHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNIPLIDLKAQYKSISEDLDRVTKEVLSSANYIMGKNVSDFEKDFADYIGVKHAISVGNG
CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCHHHEEECCCC
TDALVIALKSLGIGAGDEVITSTFTYFASAECISAVGAKPVFVDAEKDTFNIDPSKIEEK
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHH
ITEKTKAIIPVHIFGQSADMDEINKIAKKHNLKVIEDACQAVGAKYKGKMIGALSDMACF
HHHHHHEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
SFFPTKNLSCAGDGGMIVTSDDNVATIARALRTHGSGETGQKAYNLLNNINEDIDKSNTG
HHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
DDTVYNPLKYYNYLIGYNSRLDAIQAAILKVKLPHLDKWNSKRKEIAKIYDENFKDSKVV
CCHHHCHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCCCC
TPSVREENESVYHQYVLQTEDREKMLNKLKDKGVAAGVYYPVPLHLQKVYQNLGYKEGDM
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCC
PVAEYLSHRTFAIPVYPELTEEQIKYIIDSIKE
CHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]