| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933114
Identifier: 187933114
GI number: 187933114
Start: 3556513
End: 3557106
Strand: Reverse
Name: 187933114
Synonym: CLL_A3373
Alternate gene names: NA
Gene position: 3557106-3556513 (Counterclockwise)
Preceding gene: 187933851
Following gene: 187935474
Centisome position: 93.6
GC content: 24.41
Gene sequence:
>594_bases ATGAATGATCATATGGAGTCGTCTTATATAAAGGAAATAGTTGAAAAAATATCTGAAAATAGTTTAATTTCGTATGAAGA TTTACCCAAATATGATTTATTTTTATCTCAAGTTATAGACTACTTAAATGATAAATTTATGGATGAAAATTTTACTAATA ATATAGTTCAAAATTATATTAAAAGTGAAGTTATAACAAAGCCAGAGGATGGAAAAAAAAGAGGATATACTAAAATACAT CTAATTCAGCTTGTATTATTGAGTTATATGAGACCTGTGCTAACTACTGAAGAAATAAAAAAAGTTTTTAGTTTAGCATT TAATGAAATAAATGAGAGAGATGATGATATAATTGGTTGGCAAGATGCTTACAAAATATTTTCGGAAATCCAAGATGAAA GTTTAAATGAGTATTTAAAAGCATCGTTGGAAAATGAAAAGAAATTAAAAGAAAGAGTCAAATGTTTAAATTTAAAAGAC TCAGAAGAAGAAGAAAGAATAACAGTATTTTTATTAGTTCTATCTTTAATAGCAGAAGCTAGCGTAATTAAAAAATTAGT ACAGAAAATAGTAAAAGAATATCATGCACATTAA
Upstream 100 bases:
>100_bases AAATACATATAGATTATTATAATGGTAAAAATAACTTGTAATAAGTTTATGTTTACTATATACTTTTATGTAAATATATT AAGAAAGTGTGGGATATTAT
Downstream 100 bases:
>100_bases TTAATAAGAGTATTAAGAGATTGATTAAACACTTACTTGAATAAATTATATTTATTCAAGTAAGTGTTTTTTAAAGAAAT ATAATAAATTCTGTAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MNDHMESSYIKEIVEKISENSLISYEDLPKYDLFLSQVIDYLNDKFMDENFTNNIVQNYIKSEVITKPEDGKKRGYTKIH LIQLVLLSYMRPVLTTEEIKKVFSLAFNEINERDDDIIGWQDAYKIFSEIQDESLNEYLKASLENEKKLKERVKCLNLKD SEEEERITVFLLVLSLIAEASVIKKLVQKIVKEYHAH
Sequences:
>Translated_197_residues MNDHMESSYIKEIVEKISENSLISYEDLPKYDLFLSQVIDYLNDKFMDENFTNNIVQNYIKSEVITKPEDGKKRGYTKIH LIQLVLLSYMRPVLTTEEIKKVFSLAFNEINERDDDIIGWQDAYKIFSEIQDESLNEYLKASLENEKKLKERVKCLNLKD SEEEERITVFLLVLSLIAEASVIKKLVQKIVKEYHAH >Mature_197_residues MNDHMESSYIKEIVEKISENSLISYEDLPKYDLFLSQVIDYLNDKFMDENFTNNIVQNYIKSEVITKPEDGKKRGYTKIH LIQLVLLSYMRPVLTTEEIKKVFSLAFNEINERDDDIIGWQDAYKIFSEIQDESLNEYLKASLENEKKLKERVKCLNLKD SEEEERITVFLLVLSLIAEASVIKKLVQKIVKEYHAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23220; Mature: 23220
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDHMESSYIKEIVEKISENSLISYEDLPKYDLFLSQVIDYLNDKFMDENFTNNIVQNYI CCCCHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH KSEVITKPEDGKKRGYTKIHLIQLVLLSYMRPVLTTEEIKKVFSLAFNEINERDDDIIGW HHHHCCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCH QDAYKIFSEIQDESLNEYLKASLENEKKLKERVKCLNLKDSEEEERITVFLLVLSLIAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH SVIKKLVQKIVKEYHAH HHHHHHHHHHHHHHCCC >Mature Secondary Structure MNDHMESSYIKEIVEKISENSLISYEDLPKYDLFLSQVIDYLNDKFMDENFTNNIVQNYI CCCCHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH KSEVITKPEDGKKRGYTKIHLIQLVLLSYMRPVLTTEEIKKVFSLAFNEINERDDDIIGW HHHHCCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCH QDAYKIFSEIQDESLNEYLKASLENEKKLKERVKCLNLKDSEEEERITVFLLVLSLIAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH SVIKKLVQKIVKEYHAH HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA