| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187935327
Identifier: 187935327
GI number: 187935327
Start: 2273824
End: 2274390
Strand: Reverse
Name: 187935327
Synonym: CLL_A2189
Alternate gene names: NA
Gene position: 2274390-2273824 (Counterclockwise)
Preceding gene: 187933558
Following gene: 187934286
Centisome position: 59.85
GC content: 24.34
Gene sequence:
>567_bases ATGAATTTTGATTTTAAGAAATTTAAAGAAGAACTTGTTTTAGCTACAAAAAATGCTTTTTTAGAAATTATAAAAGTTAA TAAAGATGAGATTATATATGCTTTTGCATTAAATTGTTCATCAAATGTTAAATCAATTGGAATTATAGCAAATACTAAAG ACAAACTTAACGATATTGTTGGTGAATCTAAGAACGATTTTTGGTATTATAAGTTTTGTCCAGAGGAATGGAAAATTTGG AATGGTGCAGATGATGAATTTTATAGAATTGGAAACAAATTAAAAGCATTTCAAGAGGAAAATAAAAATAGAATAAGTGA TTCAGAGACTAATGTATACACATATTTTTTTCAGGAGTTTAGAGAAAAAATTTTTGATGTATGTATAGATGCATTATCAG AATTAAATGAAGAAGAATTTTTTGTAAATAATTCAAAAGAAGGTATTGAACTTAATTTTTGGGTCAGTGAATTTTTAGAT GAAGAAGAGTCTATAGATATATTTAGCAAACTAAATAATGGGAAAATAGTTGATGAGTATAGGGAACATATAGCAGAAAT TTTATAA
Upstream 100 bases:
>100_bases AGCAGTAATTATGGTAAAATAGAAAATAAAATGTTTTTTAATAAAAATACGGATATTTTAATAATAAATAATATGGCTAT GTTTTAGAAGGGTGAGTGCA
Downstream 100 bases:
>100_bases ATAATTTAATAATTCAATAGAGATTTTTTATAGAGATTTATACGAACTTATAAGGAGCGAATATGAGTATATTTAACAGA AAAAAAGAAATGAATATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MNFDFKKFKEELVLATKNAFLEIIKVNKDEIIYAFALNCSSNVKSIGIIANTKDKLNDIVGESKNDFWYYKFCPEEWKIW NGADDEFYRIGNKLKAFQEENKNRISDSETNVYTYFFQEFREKIFDVCIDALSELNEEEFFVNNSKEGIELNFWVSEFLD EEESIDIFSKLNNGKIVDEYREHIAEIL
Sequences:
>Translated_188_residues MNFDFKKFKEELVLATKNAFLEIIKVNKDEIIYAFALNCSSNVKSIGIIANTKDKLNDIVGESKNDFWYYKFCPEEWKIW NGADDEFYRIGNKLKAFQEENKNRISDSETNVYTYFFQEFREKIFDVCIDALSELNEEEFFVNNSKEGIELNFWVSEFLD EEESIDIFSKLNNGKIVDEYREHIAEIL >Mature_188_residues MNFDFKKFKEELVLATKNAFLEIIKVNKDEIIYAFALNCSSNVKSIGIIANTKDKLNDIVGESKNDFWYYKFCPEEWKIW NGADDEFYRIGNKLKAFQEENKNRISDSETNVYTYFFQEFREKIFDVCIDALSELNEEEFFVNNSKEGIELNFWVSEFLD EEESIDIFSKLNNGKIVDEYREHIAEIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22311; Mature: 22311
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFDFKKFKEELVLATKNAFLEIIKVNKDEIIYAFALNCSSNVKSIGIIANTKDKLNDIV CCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHH GESKNDFWYYKFCPEEWKIWNGADDEFYRIGNKLKAFQEENKNRISDSETNVYTYFFQEF CCCCCCEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH REKIFDVCIDALSELNEEEFFVNNSKEGIELNFWVSEFLDEEESIDIFSKLNNGKIVDEY HHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEHHHHCCCCCCHHHHHHCCCCCCHHHH REHIAEIL HHHHHHHC >Mature Secondary Structure MNFDFKKFKEELVLATKNAFLEIIKVNKDEIIYAFALNCSSNVKSIGIIANTKDKLNDIV CCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHH GESKNDFWYYKFCPEEWKIWNGADDEFYRIGNKLKAFQEENKNRISDSETNVYTYFFQEF CCCCCCEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH REKIFDVCIDALSELNEEEFFVNNSKEGIELNFWVSEFLDEEESIDIFSKLNNGKIVDEY HHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEHHHHCCCCCCHHHHHHCCCCCCHHHH REHIAEIL HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA