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The map label for this gene is 187933558

Identifier: 187933558

GI number: 187933558

Start: 2277077

End: 2277733

Strand: Reverse

Name: 187933558

Synonym: CLL_A2193

Alternate gene names: NA

Gene position: 2277733-2277077 (Counterclockwise)

Preceding gene: 187933362

Following gene: 187935327

Centisome position: 59.94

GC content: 24.96

Gene sequence:

>657_bases
ATGGATAAAAATAAAAAACCAAGTATTGGGCTAAACTATAATAAGGCAATAAAACAAAACAAAAATTTTATGTATAATGA
TTTAAAAAGAAGTAACTGTTATAATTGTGATTTCACAGGATCAAATTTTAACTTTACAAGTTTTAGAGGAGCTCACTTTA
AAGATTGTAACTTTTTTGAATGTACATTTAAGTCTGCTGAGTTTGTAGGAAGTAATCTTAAGAAAAGTAGATTTAAAAGA
GCGAAATTCGAAGATACTGTATTTGAAGGTGCAAATTTAAGTGGAGCAGATTTTAGAGATGCAAAATTTAAAAATGTAAT
ATTTGTAGGAACTGATTTAAGTACTGCAAAAAATTTAGAATTTGATAAATCATCAGTTAGAATATTTGAAGAAGCTCCAG
CAATTGAGATGAGTGAAAATCTAAAAAAAGCTATAGATTCATCACTAGAAAATGAAAAAATAAAAAGATCAAGACTTTTG
GATAATAAAGATGGAGATATTAATACTTTAAGCATAATGATTCTTTTAGAAAAATTTAATGAGAAAAGTTTAATATCAGG
ATTAAAAATTCTTTGTGATAGAGCAGACAGAGATTTTTGTACATTAAGTTACATAATAAAATCTATACAAACATATCAAA
AAGAAGGTATACTATAA

Upstream 100 bases:

>100_bases
AAAATATTATAAATTAAAAATATATATGATTTTACTACAACTGTGTTTGAAACTATGCTATCATATATTGAAATAATAAA
TAGAAGAGATGGATGAATGA

Downstream 100 bases:

>100_bases
AATAAAAGCGTGGCATAGCCACGCTTTTATTTTATAGTAATAGCATTTTTAGGGATTTGAGGTTTATTAAATTTATCAGA
AAATACTATTTTTAAAAGTA

Product: pentapeptide repeat protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MDKNKKPSIGLNYNKAIKQNKNFMYNDLKRSNCYNCDFTGSNFNFTSFRGAHFKDCNFFECTFKSAEFVGSNLKKSRFKR
AKFEDTVFEGANLSGADFRDAKFKNVIFVGTDLSTAKNLEFDKSSVRIFEEAPAIEMSENLKKAIDSSLENEKIKRSRLL
DNKDGDINTLSIMILLEKFNEKSLISGLKILCDRADRDFCTLSYIIKSIQTYQKEGIL

Sequences:

>Translated_218_residues
MDKNKKPSIGLNYNKAIKQNKNFMYNDLKRSNCYNCDFTGSNFNFTSFRGAHFKDCNFFECTFKSAEFVGSNLKKSRFKR
AKFEDTVFEGANLSGADFRDAKFKNVIFVGTDLSTAKNLEFDKSSVRIFEEAPAIEMSENLKKAIDSSLENEKIKRSRLL
DNKDGDINTLSIMILLEKFNEKSLISGLKILCDRADRDFCTLSYIIKSIQTYQKEGIL
>Mature_218_residues
MDKNKKPSIGLNYNKAIKQNKNFMYNDLKRSNCYNCDFTGSNFNFTSFRGAHFKDCNFFECTFKSAEFVGSNLKKSRFKR
AKFEDTVFEGANLSGADFRDAKFKNVIFVGTDLSTAKNLEFDKSSVRIFEEAPAIEMSENLKKAIDSSLENEKIKRSRLL
DNKDGDINTLSIMILLEKFNEKSLISGLKILCDRADRDFCTLSYIIKSIQTYQKEGIL

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25009; Mature: 25009

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNKKPSIGLNYNKAIKQNKNFMYNDLKRSNCYNCDFTGSNFNFTSFRGAHFKDCNFFE
CCCCCCCCCCCCHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
CTFKSAEFVGSNLKKSRFKRAKFEDTVFEGANLSGADFRDAKFKNVIFVGTDLSTAKNLE
EECCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCC
FDKSSVRIFEEAPAIEMSENLKKAIDSSLENEKIKRSRLLDNKDGDINTLSIMILLEKFN
CCCHHHEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
EKSLISGLKILCDRADRDFCTLSYIIKSIQTYQKEGIL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDKNKKPSIGLNYNKAIKQNKNFMYNDLKRSNCYNCDFTGSNFNFTSFRGAHFKDCNFFE
CCCCCCCCCCCCHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
CTFKSAEFVGSNLKKSRFKRAKFEDTVFEGANLSGADFRDAKFKNVIFVGTDLSTAKNLE
EECCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCC
FDKSSVRIFEEAPAIEMSENLKKAIDSSLENEKIKRSRLLDNKDGDINTLSIMILLEKFN
CCCHHHEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
EKSLISGLKILCDRADRDFCTLSYIIKSIQTYQKEGIL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA