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The map label for this gene is ygzD [H]

Identifier: 187935228

GI number: 187935228

Start: 2715591

End: 2715785

Strand: Reverse

Name: ygzD [H]

Synonym: CLL_A2604

Alternate gene names: 187935228

Gene position: 2715785-2715591 (Counterclockwise)

Preceding gene: 187934458

Following gene: 187933660

Centisome position: 71.46

GC content: 34.36

Gene sequence:

>195_bases
ATGAAAAACCTTAAATTAAAATCAGCAAGAGCTGCGCTGGATTTGTCTCAGGGGCAATTAGCTGAAATAGTAGGAGTAAC
AAGACAAACTATAGGAATGATAGAAGCTGGGAAATATAATCCATCACTGCAATTATGTATTGCAATTTGTAAGGCATTAG
GGAAAACATTAAATGATATTTTTTGGGAGGAATAG

Upstream 100 bases:

>100_bases
GCTTGATATTGCTTAATATCAAATATATAAAACTAAATGCAATATATATTTGACATTATGGAAATGATATAGTATTATTT
GAATGAAAGGAGGACGGTAG

Downstream 100 bases:

>100_bases
AAATGAAGGATGAAAGAATTGAACAAGCAACTAATAAAATTAGAAGCGAATTAACTTTGTTAATATATGGAATTGTAGTC
GTATCATTTGTAATTAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MKNLKLKSARAALDLSQGQLAEIVGVTRQTIGMIEAGKYNPSLQLCIAICKALGKTLNDIFWEE

Sequences:

>Translated_64_residues
MKNLKLKSARAALDLSQGQLAEIVGVTRQTIGMIEAGKYNPSLQLCIAICKALGKTLNDIFWEE
>Mature_64_residues
MKNLKLKSARAALDLSQGQLAEIVGVTRQTIGMIEAGKYNPSLQLCIAICKALGKTLNDIFWEE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7006; Mature: 7006

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLKLKSARAALDLSQGQLAEIVGVTRQTIGMIEAGKYNPSLQLCIAICKALGKTLNDI
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FWEE
HCCC
>Mature Secondary Structure
MKNLKLKSARAALDLSQGQLAEIVGVTRQTIGMIEAGKYNPSLQLCIAICKALGKTLNDI
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FWEE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]