| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187934458
Identifier: 187934458
GI number: 187934458
Start: 2716108
End: 2716377
Strand: Reverse
Name: 187934458
Synonym: CLL_A2605
Alternate gene names: NA
Gene position: 2716377-2716108 (Counterclockwise)
Preceding gene: 187935181
Following gene: 187935228
Centisome position: 71.48
GC content: 25.56
Gene sequence:
>270_bases ATGAATTATGTAATTATTGGTGTACTTGCAGGGGCAGGGTTATTAATGTGGATAGTAGGTAGTATTAATCAGATGCGAAG TGATATATCACGTATAAACATAAATTTAAATAAAATTGCTAAACAAATTGGAGTACCTAATACAATAAATGATGAAATAA AAAATCTTATTTTAGAAGGTAAAAAAGTTGAAGCAATAAAAAAATATAGAAATGCTACTGGACTTGGATTAAAAGAATCG AAAGAATATATTGATTCTTTAATTAAATAG
Upstream 100 bases:
>100_bases ATTAATTTAAAAACTAATGGACTAATAAAATCTAAGCAAATCGGTATTTATAATATATATTACAATTGGTTCATAGCAAT AAATTATAAGGAGTAAAATT
Downstream 100 bases:
>100_bases AAGATTGAAATATCGTATTATTCATTTCTCATATGCTCCCTTTAAGATAGATTGGTTAAAGGGAGTATATCAGAAATGAA TTTGCGATATTTTTTATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MNYVIIGVLAGAGLLMWIVGSINQMRSDISRININLNKIAKQIGVPNTINDEIKNLILEGKKVEAIKKYRNATGLGLKES KEYIDSLIK
Sequences:
>Translated_89_residues MNYVIIGVLAGAGLLMWIVGSINQMRSDISRININLNKIAKQIGVPNTINDEIKNLILEGKKVEAIKKYRNATGLGLKES KEYIDSLIK >Mature_89_residues MNYVIIGVLAGAGLLMWIVGSINQMRSDISRININLNKIAKQIGVPNTINDEIKNLILEGKKVEAIKKYRNATGLGLKES KEYIDSLIK
Specific function: Unknown
COG id: COG0222
COG function: function code J; Ribosomal protein L7/L12
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9870; Mature: 9870
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYVIIGVLAGAGLLMWIVGSINQMRSDISRININLNKIAKQIGVPNTINDEIKNLILEG CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCC KKVEAIKKYRNATGLGLKESKEYIDSLIK HHHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MNYVIIGVLAGAGLLMWIVGSINQMRSDISRININLNKIAKQIGVPNTINDEIKNLILEG CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCC KKVEAIKKYRNATGLGLKESKEYIDSLIK HHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA