| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935211
Identifier: 187935211
GI number: 187935211
Start: 1594145
End: 1595074
Strand: Reverse
Name: 187935211
Synonym: CLL_A1535
Alternate gene names: NA
Gene position: 1595074-1594145 (Counterclockwise)
Preceding gene: 187935519
Following gene: 187932854
Centisome position: 41.97
GC content: 28.49
Gene sequence:
>930_bases ATGGATATTAAACAAATTTCTAATATATTGCTAGAAATATTTTATATCATGTTAGGTCTATACATGGCCATTACGATGAT ATTTACTTTAAAAGACAAAAATCATAAAACTAGAATTGGTACTGCTCTATTCTGGGGAATAATATCTTTAATTTTTATAT TTGGTAAAATAATACCATCTATTGTTACTGGTATTCTTATTGTAGTAATTGCTTTATTATCAGCATTCAAGCAAATTAAT ATTGGTACATTAAAACAATTAGATGATACATTTACTAATTTAAAAGCAGAACAATTAGGATTAAAAATATTTGTACCATC ATTGACAATTGCTATAATTGCAATGATTATTGCTTCATTTACTCCTTTATCAGGAACAGTTGCTATAGGTATATCATCTA CTTCAGCTTTACTTATTACATTTATTCTTACTAAAGCTAAACCTATTGAATTTGTTGAAGATAGTAATAGAATGTTCCAA TCAGTAGGTGTATTTGCAATATTACCTCAACTTTTAGCTTCTCTAGGTGCTTTATTTACTGTTGCTGGAGTTGGTGATAT AATATCTAACATTATTTCTGGAGTTATACCTCAAAATAATCCTTTAGCTGGAGTTATTGCTTATTGCTTAGGTATGGCTA TATTTACAGCAATAATGGGAAATGGATTTGCAGCATTTTCAGTTATAACTGTTGGTATTGGTGTACCTTTTGTATTTGCT CAAGGTGGAGATCCTGTAATATGTTCAGCACTTGCTTTAACAGCTGGATTCTGTGGAACATTATTAACTCCAATGGCTGC TAATTTTAACATGTTACCAGCTGCATTATTAGAAATAAAAGATAAAAATGCAGTAATAAAAGCTCAAGCACCATTAGCCT TAATTTTATTATTAGTACATATAATTCTTATGTATACATTAGGATTTTAA
Upstream 100 bases:
>100_bases AGTTGCATTTATTTTGTGTATAATACAAAACTATCTTTTAGACAAAAGCCTAAAGAAAAAATATAGTTCTAAAAATCAAT AATTATGGAGGAAATGCTAA
Downstream 100 bases:
>100_bases TTAATAGATGTTTTACATGGTATGATATATTTATAAGTAACTTTTACAAAGTGATTTTACAATGTATATACTTTTTTAGA TTATTTTCGTATTGTAAAAT
Product: permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MDIKQISNILLEIFYIMLGLYMAITMIFTLKDKNHKTRIGTALFWGIISLIFIFGKIIPSIVTGILIVVIALLSAFKQIN IGTLKQLDDTFTNLKAEQLGLKIFVPSLTIAIIAMIIASFTPLSGTVAIGISSTSALLITFILTKAKPIEFVEDSNRMFQ SVGVFAILPQLLASLGALFTVAGVGDIISNIISGVIPQNNPLAGVIAYCLGMAIFTAIMGNGFAAFSVITVGIGVPFVFA QGGDPVICSALALTAGFCGTLLTPMAANFNMLPAALLEIKDKNAVIKAQAPLALILLLVHIILMYTLGF
Sequences:
>Translated_309_residues MDIKQISNILLEIFYIMLGLYMAITMIFTLKDKNHKTRIGTALFWGIISLIFIFGKIIPSIVTGILIVVIALLSAFKQIN IGTLKQLDDTFTNLKAEQLGLKIFVPSLTIAIIAMIIASFTPLSGTVAIGISSTSALLITFILTKAKPIEFVEDSNRMFQ SVGVFAILPQLLASLGALFTVAGVGDIISNIISGVIPQNNPLAGVIAYCLGMAIFTAIMGNGFAAFSVITVGIGVPFVFA QGGDPVICSALALTAGFCGTLLTPMAANFNMLPAALLEIKDKNAVIKAQAPLALILLLVHIILMYTLGF >Mature_309_residues MDIKQISNILLEIFYIMLGLYMAITMIFTLKDKNHKTRIGTALFWGIISLIFIFGKIIPSIVTGILIVVIALLSAFKQIN IGTLKQLDDTFTNLKAEQLGLKIFVPSLTIAIIAMIIASFTPLSGTVAIGISSTSALLITFILTKAKPIEFVEDSNRMFQ SVGVFAILPQLLASLGALFTVAGVGDIISNIISGVIPQNNPLAGVIAYCLGMAIFTAIMGNGFAAFSVITVGIGVPFVFA QGGDPVICSALALTAGFCGTLLTPMAANFNMLPAALLEIKDKNAVIKAQAPLALILLLVHIILMYTLGF
Specific function: Unknown
COG id: COG3817
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32813; Mature: 32813
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIKQISNILLEIFYIMLGLYMAITMIFTLKDKNHKTRIGTALFWGIISLIFIFGKIIPS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IVTGILIVVIALLSAFKQINIGTLKQLDDTFTNLKAEQLGLKIFVPSLTIAIIAMIIASF HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHCHHEEHHHHHHHHHHHHHHHC TPLSGTVAIGISSTSALLITFILTKAKPIEFVEDSNRMFQSVGVFAILPQLLASLGALFT CCCCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAGVGDIISNIISGVIPQNNPLAGVIAYCLGMAIFTAIMGNGFAAFSVITVGIGVPFVFA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE QGGDPVICSALALTAGFCGTLLTPMAANFNMLPAALLEIKDKNAVIKAQAPLALILLLVH CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHH IILMYTLGF HHHHHHHCC >Mature Secondary Structure MDIKQISNILLEIFYIMLGLYMAITMIFTLKDKNHKTRIGTALFWGIISLIFIFGKIIPS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IVTGILIVVIALLSAFKQINIGTLKQLDDTFTNLKAEQLGLKIFVPSLTIAIIAMIIASF HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHCHHEEHHHHHHHHHHHHHHHC TPLSGTVAIGISSTSALLITFILTKAKPIEFVEDSNRMFQSVGVFAILPQLLASLGALFT CCCCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAGVGDIISNIISGVIPQNNPLAGVIAYCLGMAIFTAIMGNGFAAFSVITVGIGVPFVFA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE QGGDPVICSALALTAGFCGTLLTPMAANFNMLPAALLEIKDKNAVIKAQAPLALILLLVH CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHH IILMYTLGF HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA