| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is yvgN [H]
Identifier: 187935184
GI number: 187935184
Start: 1935734
End: 1936570
Strand: Reverse
Name: yvgN [H]
Synonym: CLL_A1844
Alternate gene names: 187935184
Gene position: 1936570-1935734 (Counterclockwise)
Preceding gene: 187934303
Following gene: 187932692
Centisome position: 50.96
GC content: 26.16
Gene sequence:
>837_bases ATGAATGAATTAACTAAAAGTGTTATTTTGAGTAATAATATTAAAATGCCCTTACTTGGATTTGGAACTTATAAAGTTAA TGATGGTAAAGAAGTTATTAACTCAGTTAAAGAAGCTTTGAAATTAGGATATAGACATATTGATACAGCTGCTTTCTATA AAAATGAAGAGGGTGTTGGAATTGCTATAAAAGAAAGTGGAATAAAAAGAGAAGATATATTTTTAGTAAGTAAAGTATGG AATACAGAACAAGGATATGAAAAAACATTGAAATCTTTTGAAAATTCAATAAAAAACTTACAAACTGATTATCTTGATTT ATTTTTGATTCATTGGCCACAACCTTTGAATAAAGAAACTTGGAAAGCATTAGAAGAACTTTATAAAGAAAAGAAAGTTA GAGCCATCGGAGTAAGTAATTTTACAGTTAATCACTTAAAAGATTTAATAAATTATGCAGAAATTATTCCAATGGTAAAT CAAGTTGAATTTCATCCAAAACTTGTACAAAAAGATTTAATTAAATTTTGCAATGATAATAATATACAATTAGAAGCATG GTCTCCTTTAATGCGGGGAAAAATTTTTGAAATTGAAGTATTAAAAGAGATTGCTGAAAAGTATAAAAAGACAGTATCTC AAATTGTTTTAAGATGGGATATACAAATGGGAGTAGTAACTATCCCTAAATCTACAACACCATTTAGGATAAAGGAAAAT GCAGAAATATTTGATTTTGAGTTAACAGAGGAAGATATGAAAAAAATAATTAAATTAGATGAAAACATTAGATGTGGATC ACATCCAGATAGTATTTATTCACAAGGTCATAAATAA
Upstream 100 bases:
>100_bases ATTAGTACGTTGATATGTGTTATTTTATCTATTGCATATATCAACGCATGTTTAAAATATAGTCAAGCTCAAGGAAAATG TTTACAAAGGGGATGGGAGA
Downstream 100 bases:
>100_bases TAAAACTAATCTGAAATTTATATATTAAAACGTTAATGTAACATACCTTTAAAATATAACCCACAATAAAATATAATATA AAAAAACAAAAGAAAACACA
Product: oxidoreductase, aldo/keto reductase family
Products: NA
Alternate protein names: GR; Methylglyoxal reductase [H]
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MNELTKSVILSNNIKMPLLGFGTYKVNDGKEVINSVKEALKLGYRHIDTAAFYKNEEGVGIAIKESGIKREDIFLVSKVW NTEQGYEKTLKSFENSIKNLQTDYLDLFLIHWPQPLNKETWKALEELYKEKKVRAIGVSNFTVNHLKDLINYAEIIPMVN QVEFHPKLVQKDLIKFCNDNNIQLEAWSPLMRGKIFEIEVLKEIAEKYKKTVSQIVLRWDIQMGVVTIPKSTTPFRIKEN AEIFDFELTEEDMKKIIKLDENIRCGSHPDSIYSQGHK
Sequences:
>Translated_278_residues MNELTKSVILSNNIKMPLLGFGTYKVNDGKEVINSVKEALKLGYRHIDTAAFYKNEEGVGIAIKESGIKREDIFLVSKVW NTEQGYEKTLKSFENSIKNLQTDYLDLFLIHWPQPLNKETWKALEELYKEKKVRAIGVSNFTVNHLKDLINYAEIIPMVN QVEFHPKLVQKDLIKFCNDNNIQLEAWSPLMRGKIFEIEVLKEIAEKYKKTVSQIVLRWDIQMGVVTIPKSTTPFRIKEN AEIFDFELTEEDMKKIIKLDENIRCGSHPDSIYSQGHK >Mature_278_residues MNELTKSVILSNNIKMPLLGFGTYKVNDGKEVINSVKEALKLGYRHIDTAAFYKNEEGVGIAIKESGIKREDIFLVSKVW NTEQGYEKTLKSFENSIKNLQTDYLDLFLIHWPQPLNKETWKALEELYKEKKVRAIGVSNFTVNHLKDLINYAEIIPMVN QVEFHPKLVQKDLIKFCNDNNIQLEAWSPLMRGKIFEIEVLKEIAEKYKKTVSQIVLRWDIQMGVVTIPKSTTPFRIKEN AEIFDFELTEEDMKKIIKLDENIRCGSHPDSIYSQGHK
Specific function: Reduces glyoxal and methylglyoxal. Is not involved in the vitamin B6 biosynthesis [H]
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase family [H]
Homologues:
Organism=Homo sapiens, GI24497577, Length=296, Percent_Identity=39.1891891891892, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI5174391, Length=296, Percent_Identity=39.1891891891892, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI223468663, Length=297, Percent_Identity=41.0774410774411, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI93277124, Length=304, Percent_Identity=36.1842105263158, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI310109922, Length=283, Percent_Identity=38.1625441696113, Blast_Score=187, Evalue=7e-48, Organism=Homo sapiens, GI24497583, Length=320, Percent_Identity=36.5625, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI5174695, Length=305, Percent_Identity=36.3934426229508, Blast_Score=185, Evalue=3e-47, Organism=Homo sapiens, GI291291012, Length=277, Percent_Identity=39.3501805054152, Blast_Score=185, Evalue=4e-47, Organism=Homo sapiens, GI310109920, Length=304, Percent_Identity=35.8552631578947, Blast_Score=185, Evalue=5e-47, Organism=Homo sapiens, GI5453543, Length=304, Percent_Identity=35.8552631578947, Blast_Score=185, Evalue=5e-47, Organism=Homo sapiens, GI4502049, Length=312, Percent_Identity=38.7820512820513, Blast_Score=184, Evalue=6e-47, Organism=Homo sapiens, GI45446745, Length=304, Percent_Identity=35.8552631578947, Blast_Score=183, Evalue=1e-46, Organism=Homo sapiens, GI4503285, Length=304, Percent_Identity=35.8552631578947, Blast_Score=183, Evalue=1e-46, Organism=Homo sapiens, GI24497585, Length=320, Percent_Identity=35.9375, Blast_Score=180, Evalue=1e-45, Organism=Homo sapiens, GI300116271, Length=282, Percent_Identity=36.1702127659575, Blast_Score=162, Evalue=4e-40, Organism=Homo sapiens, GI300116273, Length=284, Percent_Identity=34.1549295774648, Blast_Score=159, Evalue=2e-39, Organism=Homo sapiens, GI310109926, Length=132, Percent_Identity=40.9090909090909, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI207028673, Length=132, Percent_Identity=40.9090909090909, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI310109924, Length=145, Percent_Identity=37.2413793103448, Blast_Score=95, Evalue=7e-20, Organism=Escherichia coli, GI87082198, Length=260, Percent_Identity=43.8461538461538, Blast_Score=242, Evalue=2e-65, Organism=Escherichia coli, GI1786400, Length=260, Percent_Identity=37.3076923076923, Blast_Score=167, Evalue=5e-43, Organism=Escherichia coli, GI1788081, Length=274, Percent_Identity=31.021897810219, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1788070, Length=320, Percent_Identity=22.5, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI48994888, Length=280, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87081735, Length=178, Percent_Identity=26.9662921348315, Blast_Score=71, Evalue=9e-14, Organism=Caenorhabditis elegans, GI71998625, Length=264, Percent_Identity=42.4242424242424, Blast_Score=223, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17561298, Length=278, Percent_Identity=38.1294964028777, Blast_Score=197, Evalue=6e-51, Organism=Caenorhabditis elegans, GI17564128, Length=298, Percent_Identity=37.248322147651, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17552492, Length=263, Percent_Identity=36.8821292775665, Blast_Score=190, Evalue=6e-49, Organism=Caenorhabditis elegans, GI17537077, Length=313, Percent_Identity=37.0607028753994, Blast_Score=188, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17538386, Length=271, Percent_Identity=37.6383763837638, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17537075, Length=297, Percent_Identity=36.7003367003367, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17550248, Length=291, Percent_Identity=35.0515463917526, Blast_Score=175, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17562292, Length=274, Percent_Identity=36.4963503649635, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17537079, Length=302, Percent_Identity=31.1258278145695, Blast_Score=160, Evalue=5e-40, Organism=Caenorhabditis elegans, GI17566692, Length=280, Percent_Identity=34.2857142857143, Blast_Score=157, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17561300, Length=274, Percent_Identity=35.036496350365, Blast_Score=152, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17550246, Length=78, Percent_Identity=48.7179487179487, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6320576, Length=301, Percent_Identity=36.8770764119601, Blast_Score=192, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6324694, Length=289, Percent_Identity=38.4083044982699, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6321896, Length=312, Percent_Identity=34.2948717948718, Blast_Score=170, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6322556, Length=276, Percent_Identity=34.0579710144928, Blast_Score=167, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6319625, Length=287, Percent_Identity=36.5853658536585, Blast_Score=166, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6320079, Length=278, Percent_Identity=35.6115107913669, Blast_Score=147, Evalue=2e-36, Organism=Drosophila melanogaster, GI24663317, Length=286, Percent_Identity=42.6573426573427, Blast_Score=200, Evalue=7e-52, Organism=Drosophila melanogaster, GI24644950, Length=303, Percent_Identity=36.6336633663366, Blast_Score=195, Evalue=3e-50, Organism=Drosophila melanogaster, GI24662789, Length=298, Percent_Identity=35.5704697986577, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI221378297, Length=323, Percent_Identity=34.3653250773994, Blast_Score=187, Evalue=7e-48, Organism=Drosophila melanogaster, GI24657054, Length=299, Percent_Identity=35.7859531772575, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI21356425, Length=277, Percent_Identity=35.7400722021661, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI45553081, Length=284, Percent_Identity=35.9154929577465, Blast_Score=172, Evalue=2e-43, Organism=Drosophila melanogaster, GI20129731, Length=285, Percent_Identity=32.9824561403509, Blast_Score=163, Evalue=1e-40, Organism=Drosophila melanogaster, GI24662785, Length=294, Percent_Identity=40.1360544217687, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI24662781, Length=293, Percent_Identity=39.5904436860068, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI281366140, Length=248, Percent_Identity=35.4838709677419, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI24646155, Length=153, Percent_Identity=35.9477124183007, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: =1.1.1.283 [H]
Molecular weight: Translated: 32269; Mature: 32269
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS00798 ALDOKETO_REDUCTASE_1 ; PS00062 ALDOKETO_REDUCTASE_2 ; PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELTKSVILSNNIKMPLLGFGTYKVNDGKEVINSVKEALKLGYRHIDTAAFYKNEEGVG CCHHHHHHHHCCCCCCCEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE IAIKESGIKREDIFLVSKVWNTEQGYEKTLKSFENSIKNLQTDYLDLFLIHWPQPLNKET EEEECCCCCHHHEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHH WKALEELYKEKKVRAIGVSNFTVNHLKDLINYAEIIPMVNQVEFHPKLVQKDLIKFCNDN HHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NIQLEAWSPLMRGKIFEIEVLKEIAEKYKKTVSQIVLRWDIQMGVVTIPKSTTPFRIKEN CEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECEEECCCCCCCEEEECC AEIFDFELTEEDMKKIIKLDENIRCGSHPDSIYSQGHK CEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure MNELTKSVILSNNIKMPLLGFGTYKVNDGKEVINSVKEALKLGYRHIDTAAFYKNEEGVG CCHHHHHHHHCCCCCCCEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE IAIKESGIKREDIFLVSKVWNTEQGYEKTLKSFENSIKNLQTDYLDLFLIHWPQPLNKET EEEECCCCCHHHEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHH WKALEELYKEKKVRAIGVSNFTVNHLKDLINYAEIIPMVNQVEFHPKLVQKDLIKFCNDN HHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NIQLEAWSPLMRGKIFEIEVLKEIAEKYKKTVSQIVLRWDIQMGVVTIPKSTTPFRIKEN CEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECEEECCCCCCCEEEECC AEIFDFELTEEDMKKIIKLDENIRCGSHPDSIYSQGHK CEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]