| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is gltA [H]
Identifier: 187935105
GI number: 187935105
Start: 3346956
End: 3348347
Strand: Reverse
Name: gltA [H]
Synonym: CLL_A3213
Alternate gene names: 187935105
Gene position: 3348347-3346956 (Counterclockwise)
Preceding gene: 187933886
Following gene: 187934202
Centisome position: 88.11
GC content: 34.12
Gene sequence:
>1392_bases ATGAATATGCAAGATAGAATGAAAAGAACACCTGTTACTGAACAAGCTCCAGAATTAAGAGCTAAGAATTTTGAAGAAGT ATGTTTAGGATATAATGAAGAAGAGGCTATAAAAGAAGCTAATAGATGTTTAGGATGTAAAAACCCTAAATGCGTTGAAG GATGTCCTGTATCAATTGATATTCCAGGATTTATAGCTAAAGCTAAAGATGGAGATTTTGAAAATGCAGCTAAAGAAATA GCTAAATATAGTGCATTACCAGCGGTTTGTGGTAGAGTATGTCCACAAGAAAGTCAATGTGAAGGTAAATGTGTATTAGG AATAAAAGGTGAACCTGTAGCAATAGGTAAATTAGAAAAATTTACTGCTGATTGGTCAAGAAAAAATAATATAGATTTAG CAAAAACAGAAGCATTAAATGGTAAGAAAATTGCTGTTATTGGAAGTGGTCCAGCAGGGCTTACTTGTGCAGGGGATTTA GCTAAAAGAGGATATGATGTTACTATATTTGAAGCTTTACATGAAGCAGGTGGAGTTTTAGTTTATGGTATACCTGAATT TAGATTACCTAAAGAAAAAGTTGTTAAAGCTGAAATTGAAAACATTAAGAAATTAGGAGTAAAGATTGAAACTAATGTTA TTATAGGTAGAACTATAACAATAGATGAATTAATGAAAGAAGAGGGATTTGATGCTGTATTTATTGGATCAGGTGCTGGA CTTCCTAAATTCATGGGTATAAATGGAGAAAATGCAAATGGTGTATTCTCTGCAAATGAATTTTTAACAAGAGTTAACTT AATGAAAGCTTTTAAAGAAGGATATAATACACCTGTTAGAGCAGGTAAAAAGGTAGCTGTAGTTGGTGGCGGAAATGTTG CTATGGATGCTGCAAGAACTGCTTTAAGATTAGGTGCAGAAGCGCATATAGTTTATAGAAGAGGTGAATCTGAACTTCCA GCAAGAGCAGAAGAAGTACATCACGCTAAAGAAGAAGGAATAATATTTGACGTTTTAACAAATCCAACTGAAATATTAAG TGATGAAAATGGATGGGTTAAAGGAATGAAATGCGTAAAAATGGAACTTGGAGAGCCAGATGCATCTGGAAGAAGAAGAC CAGTTGAAGTTGAAGGATCAGAATTTGTTATGGATGTTGATACTGTAATAATGTCACTTGGAACATCTCCAAATCCACTA ATATCTTCAACAACTGAGGGTTTAGATATTAATAAGTGGAAATGTATAGTTGCAGATGAAGATGGATTAACTACTAAAGA AGGCGTTTATGCTGGCGGAGATGCCGTTACAGGTGCTGCAACAGTAATACTTGCTATGGGCGCTGGTAAAAAAGCTGCAG AAGCTATAGATGGATATTTACAAGATAAATAA
Upstream 100 bases:
>100_bases GACAAACTATGTACAAAAGTGAAGAGGGAAGAGCGCAATTAAAGATTGAAGAAGGGGACACTCATAGCCACGGTGGTTGT GGATGTAAAGGTGATAAATA
Downstream 100 bases:
>100_bases TTATATGATGTACAATATTATTTTCCGATATGAGGAAAATATAGAATTATTAAAGTTTAAAGCTTGATGAAATATAGCTT TAATTAAGTATTAGTTAAAA
Product: oxidoreductase
Products: L-glutamine; 2-oxoglutarate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MNMQDRMKRTPVTEQAPELRAKNFEEVCLGYNEEEAIKEANRCLGCKNPKCVEGCPVSIDIPGFIAKAKDGDFENAAKEI AKYSALPAVCGRVCPQESQCEGKCVLGIKGEPVAIGKLEKFTADWSRKNNIDLAKTEALNGKKIAVIGSGPAGLTCAGDL AKRGYDVTIFEALHEAGGVLVYGIPEFRLPKEKVVKAEIENIKKLGVKIETNVIIGRTITIDELMKEEGFDAVFIGSGAG LPKFMGINGENANGVFSANEFLTRVNLMKAFKEGYNTPVRAGKKVAVVGGGNVAMDAARTALRLGAEAHIVYRRGESELP ARAEEVHHAKEEGIIFDVLTNPTEILSDENGWVKGMKCVKMELGEPDASGRRRPVEVEGSEFVMDVDTVIMSLGTSPNPL ISSTTEGLDINKWKCIVADEDGLTTKEGVYAGGDAVTGAATVILAMGAGKKAAEAIDGYLQDK
Sequences:
>Translated_463_residues MNMQDRMKRTPVTEQAPELRAKNFEEVCLGYNEEEAIKEANRCLGCKNPKCVEGCPVSIDIPGFIAKAKDGDFENAAKEI AKYSALPAVCGRVCPQESQCEGKCVLGIKGEPVAIGKLEKFTADWSRKNNIDLAKTEALNGKKIAVIGSGPAGLTCAGDL AKRGYDVTIFEALHEAGGVLVYGIPEFRLPKEKVVKAEIENIKKLGVKIETNVIIGRTITIDELMKEEGFDAVFIGSGAG LPKFMGINGENANGVFSANEFLTRVNLMKAFKEGYNTPVRAGKKVAVVGGGNVAMDAARTALRLGAEAHIVYRRGESELP ARAEEVHHAKEEGIIFDVLTNPTEILSDENGWVKGMKCVKMELGEPDASGRRRPVEVEGSEFVMDVDTVIMSLGTSPNPL ISSTTEGLDINKWKCIVADEDGLTTKEGVYAGGDAVTGAATVILAMGAGKKAAEAIDGYLQDK >Mature_463_residues MNMQDRMKRTPVTEQAPELRAKNFEEVCLGYNEEEAIKEANRCLGCKNPKCVEGCPVSIDIPGFIAKAKDGDFENAAKEI AKYSALPAVCGRVCPQESQCEGKCVLGIKGEPVAIGKLEKFTADWSRKNNIDLAKTEALNGKKIAVIGSGPAGLTCAGDL AKRGYDVTIFEALHEAGGVLVYGIPEFRLPKEKVVKAEIENIKKLGVKIETNVIIGRTITIDELMKEEGFDAVFIGSGAG LPKFMGINGENANGVFSANEFLTRVNLMKAFKEGYNTPVRAGKKVAVVGGGNVAMDAARTALRLGAEAHIVYRRGESELP ARAEEVHHAKEEGIIFDVLTNPTEILSDENGWVKGMKCVKMELGEPDASGRRRPVEVEGSEFVMDVDTVIMSLGTSPNPL ISSTTEGLDINKWKCIVADEDGLTTKEGVYAGGDAVTGAATVILAMGAGKKAAEAIDGYLQDK
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=472, Percent_Identity=33.6864406779661, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI237757300, Length=93, Percent_Identity=37.6344086021505, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1788811, Length=475, Percent_Identity=37.4736842105263, Blast_Score=299, Evalue=3e-82, Organism=Escherichia coli, GI1789606, Length=470, Percent_Identity=36.5957446808511, Blast_Score=284, Evalue=1e-77, Organism=Escherichia coli, GI87082180, Length=450, Percent_Identity=36.8888888888889, Blast_Score=268, Evalue=5e-73, Organism=Escherichia coli, GI1788468, Length=442, Percent_Identity=32.8054298642534, Blast_Score=202, Evalue=3e-53, Organism=Escherichia coli, GI1789243, Length=416, Percent_Identity=33.6538461538462, Blast_Score=177, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71984108, Length=451, Percent_Identity=33.0376940133038, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17570289, Length=491, Percent_Identity=28.9205702647658, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17543860, Length=179, Percent_Identity=35.195530726257, Blast_Score=85, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6320030, Length=482, Percent_Identity=29.253112033195, Blast_Score=177, Evalue=3e-45, Organism=Drosophila melanogaster, GI24665547, Length=468, Percent_Identity=30.1282051282051, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24665543, Length=468, Percent_Identity=30.1282051282051, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI28574881, Length=468, Percent_Identity=30.1282051282051, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24665539, Length=468, Percent_Identity=30.1282051282051, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24640763, Length=446, Percent_Identity=32.2869955156951, Blast_Score=178, Evalue=7e-45, Organism=Drosophila melanogaster, GI18858217, Length=446, Percent_Identity=32.2869955156951, Blast_Score=178, Evalue=7e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: 1.4.1.13
Molecular weight: Translated: 49587; Mature: 49587
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMQDRMKRTPVTEQAPELRAKNFEEVCLGYNEEEAIKEANRCLGCKNPKCVEGCPVSID CCHHHHHHCCCCCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE IPGFIAKAKDGDFENAAKEIAKYSALPAVCGRVCPQESQCEGKCVLGIKGEPVAIGKLEK CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCHHH FTADWSRKNNIDLAKTEALNGKKIAVIGSGPAGLTCAGDLAKRGYDVTIFEALHEAGGVL HHCCCCCCCCCCEEHHHCCCCCEEEEEECCCCCCEECCHHHHCCCCCHHHHHHHHHCCEE VYGIPEFRLPKEKVVKAEIENIKKLGVKIETNVIIGRTITIDELMKEEGFDAVFIGSGAG EECCCCCCCCHHHHHHHHHHHHHHCCEEEECCEEEEEEEEHHHHHHHCCCCEEEEECCCC LPKFMGINGENANGVFSANEFLTRVNLMKAFKEGYNTPVRAGKKVAVVGGGNVAMDAART CCCEECCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHH ALRLGAEAHIVYRRGESELPARAEEVHHAKEEGIIFDVLTNPTEILSDENGWVKGMKCVK HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHCCCCCCCCCEEEEE MELGEPDASGRRRPVEVEGSEFVMDVDTVIMSLGTSPNPLISSTTEGLDINKWKCIVADE EECCCCCCCCCCCCEEECCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECC DGLTTKEGVYAGGDAVTGAATVILAMGAGKKAAEAIDGYLQDK CCCCCCCCEEECCCCHHHHEEEEEEECCCCHHHHHHHHHHCCC >Mature Secondary Structure MNMQDRMKRTPVTEQAPELRAKNFEEVCLGYNEEEAIKEANRCLGCKNPKCVEGCPVSID CCHHHHHHCCCCCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE IPGFIAKAKDGDFENAAKEIAKYSALPAVCGRVCPQESQCEGKCVLGIKGEPVAIGKLEK CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCHHH FTADWSRKNNIDLAKTEALNGKKIAVIGSGPAGLTCAGDLAKRGYDVTIFEALHEAGGVL HHCCCCCCCCCCEEHHHCCCCCEEEEEECCCCCCEECCHHHHCCCCCHHHHHHHHHCCEE VYGIPEFRLPKEKVVKAEIENIKKLGVKIETNVIIGRTITIDELMKEEGFDAVFIGSGAG EECCCCCCCCHHHHHHHHHHHHHHCCEEEECCEEEEEEEEHHHHHHHCCCCEEEEECCCC LPKFMGINGENANGVFSANEFLTRVNLMKAFKEGYNTPVRAGKKVAVVGGGNVAMDAART CCCEECCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHH ALRLGAEAHIVYRRGESELPARAEEVHHAKEEGIIFDVLTNPTEILSDENGWVKGMKCVK HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHCCCCCCCCCEEEEE MELGEPDASGRRRPVEVEGSEFVMDVDTVIMSLGTSPNPLISSTTEGLDINKWKCIVADE EECCCCCCCCCCCCEEECCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECC DGLTTKEGVYAGGDAVTGAATVILAMGAGKKAAEAIDGYLQDK CCCCCCCCEEECCCCHHHHEEEEEEECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; NADP+
Specific reaction: 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]