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The map label for this gene is ybeQ [H]

Identifier: 187935086

GI number: 187935086

Start: 1941302

End: 1942111

Strand: Reverse

Name: ybeQ [H]

Synonym: CLL_A1848

Alternate gene names: 187935086

Gene position: 1942111-1941302 (Counterclockwise)

Preceding gene: 187933655

Following gene: 187933304

Centisome position: 51.1

GC content: 29.38

Gene sequence:

>810_bases
TTGGGCGGAATAATAACAATAAAGAATATTATAAATAATTATAAAAATGCAGATATAAATTTTGAAAGTCTAAGTTTAGA
AAAATTAAAAAAATATGCAGATAGAGAAAATAAAAAAGCACAAAATGCTTTGGGTGATAAATATTATATTGGTGATGACA
TTGCTCAGGATTATGAGGAAGCTGTTAAATGGTATATAAAGTCTGCAGAACAGGGCTATGATGTTGCACAATATAATTTA
GGTGATATGTACTATTGTGGAAATGGAGTAGAGCAGGATTATGAAAAAGCTAAGGAGTATTTCGAGTACTCAGCTAGCCA
AGGAAATCCAGATGCACAATGTAATTTGGCATGTATGTATGAAGAGGGTTTAGGAACTGGGGTAAACTATGAAAAAGCTA
TTAAGTGGTATGAAAAAGCTGCATTACAAGAAGATTTTTATGCACAATATAACTTAGGAAATTTATATATGTATGGAAAA
GGTGTTGACATAGATTACAAAAGGGCATTTAAATGGCATATGAAAGCTTCAATTTTAGGATATGAGAAGTCTCAAAATAC
TTTGGGATATATGTATGAACAAGGTCTTGGAATGGAAAAAAATTATGAAGAAGCTGTTAAGTATTATAAAAAAGCAGCAT
ATCAAGAATATTCATATGCTGAATATAATTTAGCAACTATGTATTATTTAGGAAATGGGATAACTCAAGATCGTAAAGCA
GCTTATATATGGTATCAAAAAGCTGCAAATCAAGGATTAAGAAAAGCTGTAATTGCTTTAAAAACTAAATATAAAGAAGT
AAATATTTAG

Upstream 100 bases:

>100_bases
AAAATGGAAAAACATATTGTTTTTAAATAGTGTATAATAATATTGAATCAAATTTATATGCAAATCAAATTTTAATTTGT
AATAAATGGGGGATGAAATA

Downstream 100 bases:

>100_bases
CTTAAAAATATATTAATAAAATTAATGTAATAAAGTAAAGCAGAACTTTGGATTAGTGAAAAATATAGGTACTTCATCTG
AAGAACCAACTAAATCAATA

Product: Sel1 repeat family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MGGIITIKNIINNYKNADINFESLSLEKLKKYADRENKKAQNALGDKYYIGDDIAQDYEEAVKWYIKSAEQGYDVAQYNL
GDMYYCGNGVEQDYEKAKEYFEYSASQGNPDAQCNLACMYEEGLGTGVNYEKAIKWYEKAALQEDFYAQYNLGNLYMYGK
GVDIDYKRAFKWHMKASILGYEKSQNTLGYMYEQGLGMEKNYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDRKA
AYIWYQKAANQGLRKAVIALKTKYKEVNI

Sequences:

>Translated_269_residues
MGGIITIKNIINNYKNADINFESLSLEKLKKYADRENKKAQNALGDKYYIGDDIAQDYEEAVKWYIKSAEQGYDVAQYNL
GDMYYCGNGVEQDYEKAKEYFEYSASQGNPDAQCNLACMYEEGLGTGVNYEKAIKWYEKAALQEDFYAQYNLGNLYMYGK
GVDIDYKRAFKWHMKASILGYEKSQNTLGYMYEQGLGMEKNYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDRKA
AYIWYQKAANQGLRKAVIALKTKYKEVNI
>Mature_268_residues
GGIITIKNIINNYKNADINFESLSLEKLKKYADRENKKAQNALGDKYYIGDDIAQDYEEAVKWYIKSAEQGYDVAQYNLG
DMYYCGNGVEQDYEKAKEYFEYSASQGNPDAQCNLACMYEEGLGTGVNYEKAIKWYEKAALQEDFYAQYNLGNLYMYGKG
VDIDYKRAFKWHMKASILGYEKSQNTLGYMYEQGLGMEKNYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDRKAA
YIWYQKAANQGLRKAVIALKTKYKEVNI

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=250, Percent_Identity=29.6, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI151301150, Length=186, Percent_Identity=34.9462365591398, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI217330658, Length=177, Percent_Identity=31.638418079096, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI217330656, Length=177, Percent_Identity=31.638418079096, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI154689719, Length=226, Percent_Identity=31.4159292035398, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87081769, Length=226, Percent_Identity=42.4778761061947, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1786867, Length=106, Percent_Identity=41.5094339622642, Blast_Score=82, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17563256, Length=286, Percent_Identity=28.6713286713287, Blast_Score=84, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6319410, Length=163, Percent_Identity=34.9693251533742, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6319998, Length=177, Percent_Identity=32.2033898305085, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21355295, Length=214, Percent_Identity=30.8411214953271, Blast_Score=96, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 31221; Mature: 31090

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGIITIKNIINNYKNADINFESLSLEKLKKYADRENKKAQNALGDKYYIGDDIAQDYEE
CCCEEEHHHHHCCCCCCCCCHHHCCHHHHHHHHHHCCHHHHHHCCCCEEECCHHHHHHHH
AVKWYIKSAEQGYDVAQYNLGDMYYCGNGVEQDYEKAKEYFEYSASQGNPDAQCNLACMY
HHHHHHHHHHCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
EEGLGTGVNYEKAIKWYEKAALQEDFYAQYNLGNLYMYGKGVDIDYKRAFKWHMKASILG
ECCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCHHHHHHHHHHHHHEEC
YEKSQNTLGYMYEQGLGMEKNYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDRKA
CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCEEEEEEECCCCCCCCCE
AYIWYQKAANQGLRKAVIALKTKYKEVNI
EEEEEHHHHCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GGIITIKNIINNYKNADINFESLSLEKLKKYADRENKKAQNALGDKYYIGDDIAQDYEE
CCEEEHHHHHCCCCCCCCCHHHCCHHHHHHHHHHCCHHHHHHCCCCEEECCHHHHHHHH
AVKWYIKSAEQGYDVAQYNLGDMYYCGNGVEQDYEKAKEYFEYSASQGNPDAQCNLACMY
HHHHHHHHHHCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
EEGLGTGVNYEKAIKWYEKAALQEDFYAQYNLGNLYMYGKGVDIDYKRAFKWHMKASILG
ECCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCHHHHHHHHHHHHHEEC
YEKSQNTLGYMYEQGLGMEKNYEEAVKYYKKAAYQEYSYAEYNLATMYYLGNGITQDRKA
CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCEEEEEEECCCCCCCCCE
AYIWYQKAANQGLRKAVIALKTKYKEVNI
EEEEEHHHHCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]