| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is pfkA [H]
Identifier: 187934895
GI number: 187934895
Start: 3511339
End: 3512301
Strand: Reverse
Name: pfkA [H]
Synonym: CLL_A3337
Alternate gene names: 187934895
Gene position: 3512301-3511339 (Counterclockwise)
Preceding gene: 187935605
Following gene: 187933683
Centisome position: 92.42
GC content: 34.99
Gene sequence:
>963_bases ATGAAGAAAATAGCTATTTTAACAAGTGGTGGAGATGCCCCAGGAATGAACGCAGCTATAAGAGCAGTAGTAAGAACAGC CATTGACAAAGGACTTGAAGTTATGGGAGTTCAAAGAGGCTACAGTGGATTACTTAATGGTGAACTATTTGCAATGAATA GAACATCAGTATCTGATATTATTCAAAGAGGTGGAACAATCCTAAGAACTGCTAGATGCCCAGAGTTCAAAGACGAAGAG GTAAGAAAAAGAGCAGTTAAGATATTAAATGCTTATGGTGTAGATGCTTTAGTTGTTATTGGTGGAGATGGATCTTTTAT GGGAGCCAAACTACTATCAAAACTAGGAATCAAAACTATAGGATTACCAGGAACAATAGATAATGATTTAGCTTATACTG ATTTCACAATAGGATTTGATACAGCATTAAATACTATTGTTGATGCAATAAATAAAATAAGAGATACATCAACTTCTCAT GAAAGAGTTTCAATAATTGAAGTTATGGGAAGAGATTGTGGAGACTTAGCTCTTCATGCTGGTATATCAAGTGGAGCAGA AGCTATAATAGTTCCAGAAATGGGTGAATTCGATAGAGATGCACTTTGCAGAACTATATTAGATGGTAAAAACCATGGAA AAACTCATAGCATAGTTATTCTTGCAGAAGGAATTGGTGGAGCAGAAGAACTATCAAAATATGTTCAAGAATTAACAGGA ATAGAAGCAAGAGCTACAATATTAGGTCATATCCAAAGAGGTGGAGCACCATCTGCATCAGATAGAGTTTTAGCTTCAAG ATTGGGAGCTAGAGCAGTAGAAGTTCTTTTACAAGGAGAAACTTCAAGAGTAATAGGAATTAGAGACAATCAAATTGTAG ACCAAGATATAGATGAAGCATTAGCTATAGAAAGTAAGTTTGACTTAGATCTATATAATGTAGCAGAAGTATTATCACGC TAA
Upstream 100 bases:
>100_bases TATTTTTATGTACAATTATTAGTGGTTAATTAAGACATGCATAAACTATGCGCAGGTAGGACTTTGGGTGTCCTAGTTGT TGTTTAAGGAGGAATATATT
Downstream 100 bases:
>100_bases TAAATATTTATTTATATAAATTTTTATAAACTAATTAGAATAAAGAGGAGTGTACTTACATGAGAAAGACTAAAATGATT TGTACTATTGGACCAGCAAG
Product: 6-phosphofructokinase
Products: NA
Alternate protein names: Phosphofructokinase; Phosphohexokinase [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MKKIAILTSGGDAPGMNAAIRAVVRTAIDKGLEVMGVQRGYSGLLNGELFAMNRTSVSDIIQRGGTILRTARCPEFKDEE VRKRAVKILNAYGVDALVVIGGDGSFMGAKLLSKLGIKTIGLPGTIDNDLAYTDFTIGFDTALNTIVDAINKIRDTSTSH ERVSIIEVMGRDCGDLALHAGISSGAEAIIVPEMGEFDRDALCRTILDGKNHGKTHSIVILAEGIGGAEELSKYVQELTG IEARATILGHIQRGGAPSASDRVLASRLGARAVEVLLQGETSRVIGIRDNQIVDQDIDEALAIESKFDLDLYNVAEVLSR
Sequences:
>Translated_320_residues MKKIAILTSGGDAPGMNAAIRAVVRTAIDKGLEVMGVQRGYSGLLNGELFAMNRTSVSDIIQRGGTILRTARCPEFKDEE VRKRAVKILNAYGVDALVVIGGDGSFMGAKLLSKLGIKTIGLPGTIDNDLAYTDFTIGFDTALNTIVDAINKIRDTSTSH ERVSIIEVMGRDCGDLALHAGISSGAEAIIVPEMGEFDRDALCRTILDGKNHGKTHSIVILAEGIGGAEELSKYVQELTG IEARATILGHIQRGGAPSASDRVLASRLGARAVEVLLQGETSRVIGIRDNQIVDQDIDEALAIESKFDLDLYNVAEVLSR >Mature_320_residues MKKIAILTSGGDAPGMNAAIRAVVRTAIDKGLEVMGVQRGYSGLLNGELFAMNRTSVSDIIQRGGTILRTARCPEFKDEE VRKRAVKILNAYGVDALVVIGGDGSFMGAKLLSKLGIKTIGLPGTIDNDLAYTDFTIGFDTALNTIVDAINKIRDTSTSH ERVSIIEVMGRDCGDLALHAGISSGAEAIIVPEMGEFDRDALCRTILDGKNHGKTHSIVILAEGIGGAEELSKYVQELTG IEARATILGHIQRGGAPSASDRVLASRLGARAVEVLLQGETSRVIGIRDNQIVDQDIDEALAIESKFDLDLYNVAEVLSR
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Homo sapiens, GI266453768, Length=353, Percent_Identity=40.2266288951841, Blast_Score=221, Evalue=9e-58, Organism=Homo sapiens, GI266453748, Length=353, Percent_Identity=40.2266288951841, Blast_Score=221, Evalue=9e-58, Organism=Homo sapiens, GI4505749, Length=353, Percent_Identity=40.2266288951841, Blast_Score=221, Evalue=9e-58, Organism=Homo sapiens, GI266453619, Length=353, Percent_Identity=40.2266288951841, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI48762920, Length=339, Percent_Identity=39.8230088495575, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI11321601, Length=311, Percent_Identity=40.5144694533762, Blast_Score=207, Evalue=1e-53, Organism=Escherichia coli, GI1790350, Length=319, Percent_Identity=53.6050156739812, Blast_Score=339, Evalue=1e-94, Organism=Caenorhabditis elegans, GI25147584, Length=311, Percent_Identity=41.8006430868167, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17558788, Length=312, Percent_Identity=36.2179487179487, Blast_Score=196, Evalue=1e-50, Organism=Caenorhabditis elegans, GI72003601, Length=315, Percent_Identity=29.5238095238095, Blast_Score=127, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6321679, Length=355, Percent_Identity=40.5633802816901, Blast_Score=206, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6323861, Length=342, Percent_Identity=38.0116959064327, Blast_Score=202, Evalue=8e-53, Organism=Drosophila melanogaster, GI24652337, Length=329, Percent_Identity=41.9452887537994, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI17647809, Length=329, Percent_Identity=41.9452887537994, Blast_Score=221, Evalue=5e-58, Organism=Drosophila melanogaster, GI28573326, Length=329, Percent_Identity=40.7294832826748, Blast_Score=218, Evalue=4e-57,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012828 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.11 [H]
Molecular weight: Translated: 34089; Mature: 34089
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00433 PHOSPHOFRUCTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAILTSGGDAPGMNAAIRAVVRTAIDKGLEVMGVQRGYSGLLNGELFAMNRTSVSDI CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHEEEHHHCCCCCCCCEEEEECCCCHHHH IQRGGTILRTARCPEFKDEEVRKRAVKILNAYGVDALVVIGGDGSFMGAKLLSKLGIKTI HHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCEEE GLPGTIDNDLAYTDFTIGFDTALNTIVDAINKIRDTSTSHERVSIIEVMGRDCGDLALHA CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHC GISSGAEAIIVPEMGEFDRDALCRTILDGKNHGKTHSIVILAEGIGGAEELSKYVQELTG CCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHC IEARATILGHIQRGGAPSASDRVLASRLGARAVEVLLQGETSRVIGIRDNQIVDQDIDEA CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHH LAIESKFDLDLYNVAEVLSR HHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKKIAILTSGGDAPGMNAAIRAVVRTAIDKGLEVMGVQRGYSGLLNGELFAMNRTSVSDI CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHEEEHHHCCCCCCCCEEEEECCCCHHHH IQRGGTILRTARCPEFKDEEVRKRAVKILNAYGVDALVVIGGDGSFMGAKLLSKLGIKTI HHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCEEE GLPGTIDNDLAYTDFTIGFDTALNTIVDAINKIRDTSTSHERVSIIEVMGRDCGDLALHA CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHC GISSGAEAIIVPEMGEFDRDALCRTILDGKNHGKTHSIVILAEGIGGAEELSKYVQELTG CCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHC IEARATILGHIQRGGAPSASDRVLASRLGARAVEVLLQGETSRVIGIRDNQIVDQDIDEA CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHH LAIESKFDLDLYNVAEVLSR HHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA