| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is pyk [H]
Identifier: 187933683
GI number: 187933683
Start: 3509864
End: 3511279
Strand: Reverse
Name: pyk [H]
Synonym: CLL_A3336
Alternate gene names: 187933683
Gene position: 3511279-3509864 (Counterclockwise)
Preceding gene: 187934895
Following gene: 187932917
Centisome position: 92.39
GC content: 34.46
Gene sequence:
>1416_bases ATGAGAAAGACTAAAATGATTTGTACTATTGGACCAGCAAGTGAAGACAGAGAAATATTAGAACAAGTAATGTTAGCAGG AATGAATGCTTCAAGACATAACTTTTCACATGGTGATCACGAAGAACATAGAGGAAGAATAGAAAAGGTTAAAGAATTAT CAAAGAAACTTGATAAAGAAATAGCTATCATCCTTGATACAAAAGGACCAGAAATAAGAACTGGAAAATTCGAACCAAAC AAAGTTGAATTAGTTAAAGGTACAGAATTTACTGTATACGCAGGAGATATGTCAGTAGTTGGAGACACTACAAAGTGTTC AGTTACTTACGAAGGATTAGCTAATGATGTTAAAGCAGGAAACACAATCTTAATAGATGATGGTTTAGTAGGATTAACAG TTAAATCAGTAAAAGGAAACGCAGTTATCTGTGAAGTTCAAAATACTGGATTAGTTGGAACTCATAAAGGCGTTAACGTA CCAGGAGTTTCAATCCAATTACCAGCTCTTACAGACAAAGATAAATCAGATTTAATATTTGGTTGTGAAATGGGAGTTAC TATGATAGCAGCTTCATTCGTAAGAAAAGCAGCTGACGTAGTAGCTATAAGAAAAGTTCTTGATGAAAATGGTGGAAAGA ACATCTTAATCTGCCCTAAAATCGAAAACCAAGAAGGTGTTGATAACATCGATTCAATATTAGAAATCTCAGATGCTATA ATGGTAGCTAGAGGAGATCTAGGTGTTGAAATTCCAATAGAACAAGTACCAGCAGTTCAAAAAATGATCATTCAAAAATG TAATGCAGCTGGAAAGCCAGTTGTTACTGCAACTCAAATGTTAGATTCTATGATCAGAAACCCAAGACCAACAAGAGCAG AAGTTTCAGATGTAGCTAACGCTATATTAGATGGTACTGATGCAATAATGTTATCAGGAGAAAGTGCTAACGGAACTTAC CCAGTAGAAGCTGTTAGAACTATGGCTAAAATTGCTGAAGAAACTGAAAAGCAATTAGCTCATAAAGTTGCTTACTCAAA TGATAAATCTTCAATATCTGAAGTAATTTCAAGAGCAGCATGTAATGCAGCTAATGAATTAGAAGCAACTGCTATAATTT CTTCAACTCAAACAGGAGCTACTGCTAAGAGAATATCTAAGTCTAGACCAGATTGTACAATCATAGCTGTTACTCCAGAT GAAGTAGTAGCAAAACAATTAGCATTCTCATGGGGAGTTTACCCAATAGTTGCTGATAAAATGTGTTCAACTGACGAAAT GATGATAAAATCAGTTGAAATAGCAAAAGAACATAACTATGTTAAAAATGGTGATACAGTAGTTTTAGCTGCTGGAGTTC CAGTTGATAAAACAGGAACAACTAACCTATTAAAAGTTAGCGTAGTAGGCGAATAA
Upstream 100 bases:
>100_bases ACTTAGATCTATATAATGTAGCAGAAGTATTATCACGCTAATAAATATTTATTTATATAAATTTTTATAAACTAATTAGA ATAAAGAGGAGTGTACTTAC
Downstream 100 bases:
>100_bases TAAACTTATAATAAAAAAAGCTTTCGATTTTATTCGAGAGCTTTTTTATTCTTTTTATTAACTATACTACTAATAATTGA GTTGAATAATTAAATATAAA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MRKTKMICTIGPASEDREILEQVMLAGMNASRHNFSHGDHEEHRGRIEKVKELSKKLDKEIAIILDTKGPEIRTGKFEPN KVELVKGTEFTVYAGDMSVVGDTTKCSVTYEGLANDVKAGNTILIDDGLVGLTVKSVKGNAVICEVQNTGLVGTHKGVNV PGVSIQLPALTDKDKSDLIFGCEMGVTMIAASFVRKAADVVAIRKVLDENGGKNILICPKIENQEGVDNIDSILEISDAI MVARGDLGVEIPIEQVPAVQKMIIQKCNAAGKPVVTATQMLDSMIRNPRPTRAEVSDVANAILDGTDAIMLSGESANGTY PVEAVRTMAKIAEETEKQLAHKVAYSNDKSSISEVISRAACNAANELEATAIISSTQTGATAKRISKSRPDCTIIAVTPD EVVAKQLAFSWGVYPIVADKMCSTDEMMIKSVEIAKEHNYVKNGDTVVLAAGVPVDKTGTTNLLKVSVVGE
Sequences:
>Translated_471_residues MRKTKMICTIGPASEDREILEQVMLAGMNASRHNFSHGDHEEHRGRIEKVKELSKKLDKEIAIILDTKGPEIRTGKFEPN KVELVKGTEFTVYAGDMSVVGDTTKCSVTYEGLANDVKAGNTILIDDGLVGLTVKSVKGNAVICEVQNTGLVGTHKGVNV PGVSIQLPALTDKDKSDLIFGCEMGVTMIAASFVRKAADVVAIRKVLDENGGKNILICPKIENQEGVDNIDSILEISDAI MVARGDLGVEIPIEQVPAVQKMIIQKCNAAGKPVVTATQMLDSMIRNPRPTRAEVSDVANAILDGTDAIMLSGESANGTY PVEAVRTMAKIAEETEKQLAHKVAYSNDKSSISEVISRAACNAANELEATAIISSTQTGATAKRISKSRPDCTIIAVTPD EVVAKQLAFSWGVYPIVADKMCSTDEMMIKSVEIAKEHNYVKNGDTVVLAAGVPVDKTGTTNLLKVSVVGE >Mature_471_residues MRKTKMICTIGPASEDREILEQVMLAGMNASRHNFSHGDHEEHRGRIEKVKELSKKLDKEIAIILDTKGPEIRTGKFEPN KVELVKGTEFTVYAGDMSVVGDTTKCSVTYEGLANDVKAGNTILIDDGLVGLTVKSVKGNAVICEVQNTGLVGTHKGVNV PGVSIQLPALTDKDKSDLIFGCEMGVTMIAASFVRKAADVVAIRKVLDENGGKNILICPKIENQEGVDNIDSILEISDAI MVARGDLGVEIPIEQVPAVQKMIIQKCNAAGKPVVTATQMLDSMIRNPRPTRAEVSDVANAILDGTDAIMLSGESANGTY PVEAVRTMAKIAEETEKQLAHKVAYSNDKSSISEVISRAACNAANELEATAIISSTQTGATAKRISKSRPDCTIIAVTPD EVVAKQLAFSWGVYPIVADKMCSTDEMMIKSVEIAKEHNYVKNGDTVVLAAGVPVDKTGTTNLLKVSVVGE
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI10835121, Length=487, Percent_Identity=44.1478439425051, Blast_Score=375, Evalue=1e-104, Organism=Homo sapiens, GI32967597, Length=487, Percent_Identity=44.1478439425051, Blast_Score=375, Evalue=1e-104, Organism=Homo sapiens, GI33286422, Length=487, Percent_Identity=43.1211498973306, Blast_Score=373, Evalue=1e-103, Organism=Homo sapiens, GI33286420, Length=487, Percent_Identity=43.1211498973306, Blast_Score=373, Evalue=1e-103, Organism=Homo sapiens, GI33286418, Length=487, Percent_Identity=43.3264887063655, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI310128732, Length=288, Percent_Identity=47.5694444444444, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI310128730, Length=288, Percent_Identity=47.5694444444444, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI310128736, Length=236, Percent_Identity=44.0677966101695, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI310128734, Length=236, Percent_Identity=44.0677966101695, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI310128738, Length=212, Percent_Identity=43.3962264150943, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI1787965, Length=472, Percent_Identity=53.3898305084746, Blast_Score=490, Evalue=1e-140, Organism=Escherichia coli, GI1788160, Length=478, Percent_Identity=38.9121338912134, Blast_Score=302, Evalue=3e-83, Organism=Caenorhabditis elegans, GI17544584, Length=482, Percent_Identity=44.6058091286307, Blast_Score=386, Evalue=1e-107, Organism=Caenorhabditis elegans, GI71984413, Length=484, Percent_Identity=44.4214876033058, Blast_Score=360, Evalue=1e-100, Organism=Caenorhabditis elegans, GI17506829, Length=484, Percent_Identity=44.4214876033058, Blast_Score=360, Evalue=1e-100, Organism=Caenorhabditis elegans, GI71984406, Length=484, Percent_Identity=44.4214876033058, Blast_Score=359, Evalue=1e-99, Organism=Caenorhabditis elegans, GI17506831, Length=484, Percent_Identity=44.4214876033058, Blast_Score=359, Evalue=2e-99, Organism=Saccharomyces cerevisiae, GI6319279, Length=486, Percent_Identity=43.4156378600823, Blast_Score=345, Evalue=9e-96, Organism=Saccharomyces cerevisiae, GI6324923, Length=488, Percent_Identity=41.1885245901639, Blast_Score=335, Evalue=7e-93, Organism=Drosophila melanogaster, GI24648964, Length=498, Percent_Identity=45.5823293172691, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI28571814, Length=498, Percent_Identity=45.5823293172691, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI24648966, Length=412, Percent_Identity=44.9029126213592, Blast_Score=333, Evalue=1e-91, Organism=Drosophila melanogaster, GI24581235, Length=484, Percent_Identity=34.504132231405, Blast_Score=258, Evalue=4e-69, Organism=Drosophila melanogaster, GI24646914, Length=383, Percent_Identity=37.0757180156658, Blast_Score=206, Evalue=3e-53,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50349; Mature: 50349
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTKMICTIGPASEDREILEQVMLAGMNASRHNFSHGDHEEHRGRIEKVKELSKKLDKE CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCE IAIILDTKGPEIRTGKFEPNKVELVKGTEFTVYAGDMSVVGDTTKCSVTYEGLANDVKAG EEEEEECCCCCEECCCCCCCEEEEEECCEEEEEECCEEEECCCEEEEEECCCCCCHHCCC NTILIDDGLVGLTVKSVKGNAVICEVQNTGLVGTHKGVNVPGVSIQLPALTDKDKSDLIF CEEEEECCEEEEEEEECCCCEEEEEEECCCEEECCCCCCCCCCEEEECCCCCCCCCCEEE GCEMGVTMIAASFVRKAADVVAIRKVLDENGGKNILICPKIENQEGVDNIDSILEISDAI ECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCEE MVARGDLGVEIPIEQVPAVQKMIIQKCNAAGKPVVTATQMLDSMIRNPRPTRAEVSDVAN EEEECCCCEECCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH AILDGTDAIMLSGESANGTYPVEAVRTMAKIAEETEKQLAHKVAYSNDKSSISEVISRAA HHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH CNAANELEATAIISSTQTGATAKRISKSRPDCTIIAVTPDEVVAKQLAFSWGVYPIVADK CCCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHH MCSTDEMMIKSVEIAKEHNYVKNGDTVVLAAGVPVDKTGTTNLLKVSVVGE HCCCHHHHHHHHHHHHHCCEECCCCEEEEEECCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MRKTKMICTIGPASEDREILEQVMLAGMNASRHNFSHGDHEEHRGRIEKVKELSKKLDKE CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCE IAIILDTKGPEIRTGKFEPNKVELVKGTEFTVYAGDMSVVGDTTKCSVTYEGLANDVKAG EEEEEECCCCCEECCCCCCCEEEEEECCEEEEEECCEEEECCCEEEEEECCCCCCHHCCC NTILIDDGLVGLTVKSVKGNAVICEVQNTGLVGTHKGVNVPGVSIQLPALTDKDKSDLIF CEEEEECCEEEEEEEECCCCEEEEEEECCCEEECCCCCCCCCCEEEECCCCCCCCCCEEE GCEMGVTMIAASFVRKAADVVAIRKVLDENGGKNILICPKIENQEGVDNIDSILEISDAI ECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCEE MVARGDLGVEIPIEQVPAVQKMIIQKCNAAGKPVVTATQMLDSMIRNPRPTRAEVSDVAN EEEECCCCEECCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH AILDGTDAIMLSGESANGTYPVEAVRTMAKIAEETEKQLAHKVAYSNDKSSISEVISRAA HHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH CNAANELEATAIISSTQTGATAKRISKSRPDCTIIAVTPDEVVAKQLAFSWGVYPIVADK CCCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHH MCSTDEMMIKSVEIAKEHNYVKNGDTVVLAAGVPVDKTGTTNLLKVSVVGE HCCCHHHHHHHHHHHHHCCEECCCCEEEEEECCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11466286; 9625784 [H]