| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is spaK [H]
Identifier: 187934808
GI number: 187934808
Start: 2291625
End: 2292986
Strand: Reverse
Name: spaK [H]
Synonym: CLL_A2206
Alternate gene names: 187934808
Gene position: 2292986-2291625 (Counterclockwise)
Preceding gene: 187934010
Following gene: 187934906
Centisome position: 60.34
GC content: 24.67
Gene sequence:
>1362_bases GTGGAAAGAATAAAGAAACAAAAAAGCATAGCTAAAATATTTGCTACGTATATAGCTACATTTTGTATAATTACAGTTCT TCAAATTATAATAATCTCATTTTTATTTATTATAGGACTTAAAAATGGAATGATTTTACCAGCTAATTATTATGAACAAA TGGTAGAGAAAAATAGAAACAATATTATGGTAACAGATGAAGTATCGGAATTTATACCCAAAGAATGCAATTATGTGGTA TATGATTTAAATGGAAAAATCATTAGTAGCAATGTATCAGAAGAAAATGCATTAGGAATATGGAAAGTGATTGAAGAAGA TAGAACTAGTTATGGTAATAATTATTATAAGATAATACCAAGAGGCAATGAAATTTGTGCTATAGGATATAAATTAACAG CTCAGTTCTCTAATCCAATTTTACGTAAATATCTTCCAAGTGCTGAATGGTGTCCAGTAATTTTATTTATTATAACATTT ATATTAGGAATAATAATTTTATCTAAATGTTTTAGTAAAAGAGTAGCTAAAGAAATGAAGATTTTAAAAAATATTACTGA AAGCATAAAGGTAGAGAATCTAAATTTTGAGACAGAAGAATCAAGTATAACTGAAGTCAACGAAGTACTATCGGCTTTAG ACAAAATGAGATTAGAATTAAATGTATCACTTAATAAACAGTGGAATTTAGAAAAATCAAGAAAAGATCAAATGGCAGCA TTAGCACATGACATAAAAACACCATTAACTATAATTAAAGGTAATTCAGAACTACTTAGGGAATTAAATTTAAATTCTGA TGCTATGGTATTTAATGAAAATATATTAAATGAAATTAAAAATATGGAGTATTATATAAAATCTTTAATAGAAATTATGA AATCAGAAAAAGAAATGGTTTTTAAAAAAGAAGTGGTAAATTTAAAAAATTTCATAAGTGAAATAAAGGAAAAGTCAATT TTACTTGGAAGGGAAAAAGAAATTAATTTTATAACTGAAATTAATAATCTTCCAGAGAGCATTAATGCAGATAAGATTGC TTTAAAGCGTGCAATAATAAATTTAATTAACAATAGTATAGATTATTGTCCTATGAAAGGAAAAATATTATTTAAAGTTG ATTTAAATGATAATTATATAAGTTTTAGCATAGAGGATGATGGCAGAGGTTTTAGTGAAGAAGAATTAAGTTTAGCAACA AACCAGTTCTATCAAGGAGATAAAAGTAGAAATTCTAAAAATCATTATGGAATGGGACTTTATATAACTAAAAATATTAT AAATAAACATGGTGGAAATCTTATATTAGAAAATTCAAAGGAAATAGGAGGAGCAAATGTTGTTATTAAGTTACCATTAT AG
Upstream 100 bases:
>100_bases GTGATACAACTGCTATTGTAGAACATATTAAAAATATAAGAAGTAAACTAAAAGTAAGAGGTATAAATACAATAGAAACT GTTTGGGGGATTGGTTATAA
Downstream 100 bases:
>100_bases AAAACTAATAAACTATTTTAAGACACTAAATGGTTATATAAAGTTAGATACTAGCAAAATTATTTTTTATAAAGACAATC ACTTGATTTTAGTATTGTAA
Product: subtilin biosynthesis sensor protein SpaK
Products: NA
Alternate protein names: Subtilin biosynthesis sensor protein spaK [H]
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MERIKKQKSIAKIFATYIATFCIITVLQIIIISFLFIIGLKNGMILPANYYEQMVEKNRNNIMVTDEVSEFIPKECNYVV YDLNGKIISSNVSEENALGIWKVIEEDRTSYGNNYYKIIPRGNEICAIGYKLTAQFSNPILRKYLPSAEWCPVILFIITF ILGIIILSKCFSKRVAKEMKILKNITESIKVENLNFETEESSITEVNEVLSALDKMRLELNVSLNKQWNLEKSRKDQMAA LAHDIKTPLTIIKGNSELLRELNLNSDAMVFNENILNEIKNMEYYIKSLIEIMKSEKEMVFKKEVVNLKNFISEIKEKSI LLGREKEINFITEINNLPESINADKIALKRAIINLINNSIDYCPMKGKILFKVDLNDNYISFSIEDDGRGFSEEELSLAT NQFYQGDKSRNSKNHYGMGLYITKNIINKHGGNLILENSKEIGGANVVIKLPL
Sequences:
>Translated_453_residues MERIKKQKSIAKIFATYIATFCIITVLQIIIISFLFIIGLKNGMILPANYYEQMVEKNRNNIMVTDEVSEFIPKECNYVV YDLNGKIISSNVSEENALGIWKVIEEDRTSYGNNYYKIIPRGNEICAIGYKLTAQFSNPILRKYLPSAEWCPVILFIITF ILGIIILSKCFSKRVAKEMKILKNITESIKVENLNFETEESSITEVNEVLSALDKMRLELNVSLNKQWNLEKSRKDQMAA LAHDIKTPLTIIKGNSELLRELNLNSDAMVFNENILNEIKNMEYYIKSLIEIMKSEKEMVFKKEVVNLKNFISEIKEKSI LLGREKEINFITEINNLPESINADKIALKRAIINLINNSIDYCPMKGKILFKVDLNDNYISFSIEDDGRGFSEEELSLAT NQFYQGDKSRNSKNHYGMGLYITKNIINKHGGNLILENSKEIGGANVVIKLPL >Mature_453_residues MERIKKQKSIAKIFATYIATFCIITVLQIIIISFLFIIGLKNGMILPANYYEQMVEKNRNNIMVTDEVSEFIPKECNYVV YDLNGKIISSNVSEENALGIWKVIEEDRTSYGNNYYKIIPRGNEICAIGYKLTAQFSNPILRKYLPSAEWCPVILFIITF ILGIIILSKCFSKRVAKEMKILKNITESIKVENLNFETEESSITEVNEVLSALDKMRLELNVSLNKQWNLEKSRKDQMAA LAHDIKTPLTIIKGNSELLRELNLNSDAMVFNENILNEIKNMEYYIKSLIEIMKSEKEMVFKKEVVNLKNFISEIKEKSI LLGREKEINFITEINNLPESINADKIALKRAIINLINNSIDYCPMKGKILFKVDLNDNYISFSIEDDGRGFSEEELSLAT NQFYQGDKSRNSKNHYGMGLYITKNIINKHGGNLILENSKEIGGANVVIKLPL
Specific function: Member of the two-component regulatory system spaK/spaR involved in the regulation of the biosynthesis of lantibiotic subtilin. SpaK may function as a membrane-associated protein kinase that phosphorylates spaR in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790861, Length=309, Percent_Identity=22.9773462783171, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1786600, Length=215, Percent_Identity=28.8372093023256, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790346, Length=283, Percent_Identity=25.0883392226148, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788549, Length=217, Percent_Identity=27.6497695852535, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1789808, Length=256, Percent_Identity=28.125, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1788393, Length=233, Percent_Identity=24.4635193133047, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788279, Length=294, Percent_Identity=27.5510204081633, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1786912, Length=229, Percent_Identity=26.2008733624454, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1786783, Length=220, Percent_Identity=24.0909090909091, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI48994928, Length=222, Percent_Identity=22.972972972973, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790551, Length=307, Percent_Identity=22.1498371335505, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI145693157, Length=226, Percent_Identity=26.1061946902655, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=24.8945147679325, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI87082128, Length=308, Percent_Identity=20.4545454545455, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR008358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51927; Mature: 51927
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERIKKQKSIAKIFATYIATFCIITVLQIIIISFLFIIGLKNGMILPANYYEQMVEKNRN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCC NIMVTDEVSEFIPKECNYVVYDLNGKIISSNVSEENALGIWKVIEEDRTSYGNNYYKIIP CEEEECCHHHCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE RGNEICAIGYKLTAQFSNPILRKYLPSAEWCPVILFIITFILGIIILSKCFSKRVAKEMK CCCCEEEEEEEEEEHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILKNITESIKVENLNFETEESSITEVNEVLSALDKMRLELNVSLNKQWNLEKSRKDQMAA HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHH LAHDIKTPLTIIKGNSELLRELNLNSDAMVFNENILNEIKNMEYYIKSLIEIMKSEKEMV HHHHHCCCEEEEECCHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKKEVVNLKNFISEIKEKSILLGREKEINFITEINNLPESINADKIALKRAIINLINNSI HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC DYCPMKGKILFKVDLNDNYISFSIEDDGRGFSEEELSLATNQFYQGDKSRNSKNHYGMGL CCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEE YITKNIINKHGGNLILENSKEIGGANVVIKLPL EEEHHHHHCCCCCEEEECCCCCCCCEEEEEECC >Mature Secondary Structure MERIKKQKSIAKIFATYIATFCIITVLQIIIISFLFIIGLKNGMILPANYYEQMVEKNRN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCC NIMVTDEVSEFIPKECNYVVYDLNGKIISSNVSEENALGIWKVIEEDRTSYGNNYYKIIP CEEEECCHHHCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE RGNEICAIGYKLTAQFSNPILRKYLPSAEWCPVILFIITFILGIIILSKCFSKRVAKEMK CCCCEEEEEEEEEEHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILKNITESIKVENLNFETEESSITEVNEVLSALDKMRLELNVSLNKQWNLEKSRKDQMAA HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHH LAHDIKTPLTIIKGNSELLRELNLNSDAMVFNENILNEIKNMEYYIKSLIEIMKSEKEMV HHHHHCCCEEEEECCHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKKEVVNLKNFISEIKEKSILLGREKEINFITEINNLPESINADKIALKRAIINLINNSI HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC DYCPMKGKILFKVDLNDNYISFSIEDDGRGFSEEELSLATNQFYQGDKSRNSKNHYGMGL CCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEE YITKNIINKHGGNLILENSKEIGGANVVIKLPL EEEHHHHHCCCCCEEEECCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8439156; 8085823 [H]