| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is yozG [H]
Identifier: 187934768
GI number: 187934768
Start: 3496162
End: 3496368
Strand: Reverse
Name: yozG [H]
Synonym: CLL_A3323
Alternate gene names: 187934768
Gene position: 3496368-3496162 (Counterclockwise)
Preceding gene: 187933744
Following gene: 187933363
Centisome position: 92.0
GC content: 29.47
Gene sequence:
>207_bases ATGGCGATAGTAGTAAATTTGGATGTAATGATGGCTAAAAGAAAAATATCCCTTCAAGACTTAGCTGAAAGAGTTGGAAT AACCAATGCAAATCTATCCATATTAAAAAATAATAAGGCAAAGGCAATAAGATTTTCTACTTTAGAATCTATATGTAAAG AACTTAAGTGTCAGCCAGGTGATATTTTAGAATATGTAGAAGATTAA
Upstream 100 bases:
>100_bases AGCAGGAATTTTTCTGCTAATTTTAGCTTCTGTATTTAAGCAAGCGCTTAAATATAAAGAAGAAAATGATTATACAATTT AGAGTAAAGGAATATGTTTT
Downstream 100 bases:
>100_bases ATAAAAATTATGCAGTTAAATTATACAATGATTATCTTGAGAGATATGAAAATTTACAAAGGAAGCGAAATTATAAACGT ATGAGATTAGATAAATTTTT
Product: transcription regulator, Cro/CI family -related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MAIVVNLDVMMAKRKISLQDLAERVGITNANLSILKNNKAKAIRFSTLESICKELKCQPGDILEYVED
Sequences:
>Translated_68_residues MAIVVNLDVMMAKRKISLQDLAERVGITNANLSILKNNKAKAIRFSTLESICKELKCQPGDILEYVED >Mature_67_residues AIVVNLDVMMAKRKISLQDLAERVGITNANLSILKNNKAKAIRFSTLESICKELKCQPGDILEYVED
Specific function: Unknown
COG id: COG3655
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 7608; Mature: 7477
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVVNLDVMMAKRKISLQDLAERVGITNANLSILKNNKAKAIRFSTLESICKELKCQPG CEEEEEHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCC DILEYVED CHHHHHCC >Mature Secondary Structure AIVVNLDVMMAKRKISLQDLAERVGITNANLSILKNNKAKAIRFSTLESICKELKCQPG EEEEEHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCC DILEYVED CHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]