| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934217
Identifier: 187934217
GI number: 187934217
Start: 2295170
End: 2295919
Strand: Reverse
Name: 187934217
Synonym: CLL_A2210
Alternate gene names: NA
Gene position: 2295919-2295170 (Counterclockwise)
Preceding gene: 187933442
Following gene: 187934278
Centisome position: 60.41
GC content: 28.27
Gene sequence:
>750_bases ATGCTTAACTATTTTTTGTCAGAAAATCAAAAGGTAAAACACACTTTTTTAAACAAACTTGTATATTTAGCGCCTGTATT AACAATTCTATTATCAGCGTTTCTTGCAATGAATTATTTTCAAGTTGATAGCTACAATTGGTGGTATTCGATGATGTTAC CAGGCTCTCTTTTGTTAGGATGCTGTTTATTAAATAGAATTGATGGGAATATGAAAAACAAAGCAGTAATATGTCTTCCA ATAGATTTGAAGAAAGTATGGTTTGCAAAAATTCTAGTTGGAATAAAGAATTTATCAATTTCATGTATCATTCTTTTTAT ATTAAGTGAGTTAGGTGTATTTTTAATTAATTCAAACAGTATAAATGAAATTGCGTTAATAAACGAATTATATGCTTCAA TATTACTTATAGTAACATTTATGTGGCAAATTCCATTAAACTTTTTTTTAGAAGATAAAATAGGATTGTTTTGGAGTGTA ATTTTAAGTTCAGCAGTTAATATTTTTTTCGGAACTATGGCTGTAAAAAGTTATTGGTGGATGATACCTTTTTCTTATCC GTCTAGAATGATGTGTCCAGTTTTAGGGATTTTACCTAATGGATTATTGGCAGTGCCAGAAAGTCAAACCTTTACTCCAG AGGTTCTTTCTTATTCATCAGTTCCGTATGGTTTGATAGTTTCAATTATATTATTCTTAGCAATATCTTATATAACTTCT ATATGGTATGAGAGAAAAGAGGTATTATAA
Upstream 100 bases:
>100_bases GTGGTGGCGTTTTAGGTTATCAAGGTGAATTAAGAAAAGGTGAAGAATTAGAAAAACTATTTATAGATATTGCAGGAAAG CATAGAAGGGAGGTATAAAA
Downstream 100 bases:
>100_bases TTATGACTACAATTTATCGTTTAATGAAATCGGATTTTATAAAATTAAAGAGAACATCATTTTACTGGATTCATATTTGT GTTCCACTTATAGGAGCATT
Product: lantibiotic permease protein SpaE/mutE
Products: NA
Alternate protein names: Permease; Bacteriocin ABC Transporter Permease Protein Subunit; Lantibiotic ABC Transporter Permease Protein; Transporter Protein; Bacteriocin ABC Transporter Permease Subunit; Bacteriocin Abc Transporter Permease Subunit; Lantibiotic PermeaE/MutE; Mutacin ABC Transporter Protein MutE; Lantibiotic ABC Transporter Permease; Antibiotic Permease Protein SpaE/MutE; Antibiotic ABC Transporter; Subtilin ABC Transporter Permease
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLNYFLSENQKVKHTFLNKLVYLAPVLTILLSAFLAMNYFQVDSYNWWYSMMLPGSLLLGCCLLNRIDGNMKNKAVICLP IDLKKVWFAKILVGIKNLSISCIILFILSELGVFLINSNSINEIALINELYASILLIVTFMWQIPLNFFLEDKIGLFWSV ILSSAVNIFFGTMAVKSYWWMIPFSYPSRMMCPVLGILPNGLLAVPESQTFTPEVLSYSSVPYGLIVSIILFLAISYITS IWYERKEVL
Sequences:
>Translated_249_residues MLNYFLSENQKVKHTFLNKLVYLAPVLTILLSAFLAMNYFQVDSYNWWYSMMLPGSLLLGCCLLNRIDGNMKNKAVICLP IDLKKVWFAKILVGIKNLSISCIILFILSELGVFLINSNSINEIALINELYASILLIVTFMWQIPLNFFLEDKIGLFWSV ILSSAVNIFFGTMAVKSYWWMIPFSYPSRMMCPVLGILPNGLLAVPESQTFTPEVLSYSSVPYGLIVSIILFLAISYITS IWYERKEVL >Mature_249_residues MLNYFLSENQKVKHTFLNKLVYLAPVLTILLSAFLAMNYFQVDSYNWWYSMMLPGSLLLGCCLLNRIDGNMKNKAVICLP IDLKKVWFAKILVGIKNLSISCIILFILSELGVFLINSNSINEIALINELYASILLIVTFMWQIPLNFFLEDKIGLFWSV ILSSAVNIFFGTMAVKSYWWMIPFSYPSRMMCPVLGILPNGLLAVPESQTFTPEVLSYSSVPYGLIVSIILFLAISYITS IWYERKEVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28451; Mature: 28451
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNYFLSENQKVKHTFLNKLVYLAPVLTILLSAFLAMNYFQVDSYNWWYSMMLPGSLLLG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHH CCLLNRIDGNMKNKAVICLPIDLKKVWFAKILVGIKNLSISCIILFILSELGVFLINSNS HHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCC INEIALINELYASILLIVTFMWQIPLNFFLEDKIGLFWSVILSSAVNIFFGTMAVKSYWW CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE MIPFSYPSRMMCPVLGILPNGLLAVPESQTFTPEVLSYSSVPYGLIVSIILFLAISYITS EEECCCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH IWYERKEVL HHHHHHHCC >Mature Secondary Structure MLNYFLSENQKVKHTFLNKLVYLAPVLTILLSAFLAMNYFQVDSYNWWYSMMLPGSLLLG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHH CCLLNRIDGNMKNKAVICLPIDLKKVWFAKILVGIKNLSISCIILFILSELGVFLINSNS HHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCC INEIALINELYASILLIVTFMWQIPLNFFLEDKIGLFWSVILSSAVNIFFGTMAVKSYWW CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE MIPFSYPSRMMCPVLGILPNGLLAVPESQTFTPEVLSYSSVPYGLIVSIILFLAISYITS EEECCCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH IWYERKEVL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA