| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934278
Identifier: 187934278
GI number: 187934278
Start: 2294409
End: 2295167
Strand: Reverse
Name: 187934278
Synonym: CLL_A2209
Alternate gene names: NA
Gene position: 2295167-2294409 (Counterclockwise)
Preceding gene: 187934217
Following gene: 187935009
Centisome position: 60.39
GC content: 26.88
Gene sequence:
>759_bases ATGACTACAATTTATCGTTTAATGAAATCGGATTTTATAAAATTAAAGAGAACATCATTTTACTGGATTCATATTTGTGT TCCACTTATAGGAGCATTTCTATTCTTATGGTATTTTTCTTTTTCACTATTGAGTAGTACAGGTAAGGTACAAGGGTATT TAGAATCTATAGCATTAGCATATCCTGTGATAATAGGTATTGTAACTTCAATGGTGGTAGATCAAGAATCAATGGCTGGA GGATTTAAGGAAATTTTAGGGACTGAATATGGAAAAGGAAAATGTCTTATAAGTAAAGTACTTATTTTGCTTTTCACAGG ATTTTTATCTACCATATTAGCAATAGGAATTTTCTTTATTGGATTTCAATATGTTTTAAAGCAAAACTTATTGTCTTTAA ATTTTTATATTTATGTAACCTTAATTATATTTGGAAGTCAAATTTTTCTTTATTTATTTCACTTATGGATAAGTTTCATA TTAGGAAATGGAGGATCTATTGGAATTGGAATATTTGAAAGTTTAATTTCAGCATTAATGATTACAGGTCTTGGTGATGG AATATGGCAATGGATACCATGTTCATGGGGAATGAGACTTATAAATTATTTTTCTGCTAATTGGGTAAATGAAGGAATAA AGTCAAGTGAATTTTTAAATTTTTATGTTGGAATTCAAAATAGTATTGTATTAACTATTTTATTAGCAATATGCTTTGCA ATTTGGTTTAAATTTTATGAAGGAAGAAAGTATGTTTAA
Upstream 100 bases:
>100_bases ATTCATCAGTTCCGTATGGTTTGATAGTTTCAATTATATTATTCTTAGCAATATCTTATATAACTTCTATATGGTATGAG AGAAAAGAGGTATTATAATT
Downstream 100 bases:
>100_bases AACATAAAAAATAATTATATGCCACACCATTATTTCTTTATTGTGCTTGAAGAGGGTAAATAGCTAAAATATTAAAACTT ATCTTATAATAGTAAATCAT
Product: antibiotic transport-associated permease SpaG/mutG
Products: NA
Alternate protein names: Lantibiotic ABC Transporter; Permease; Lantibiotic ABC Transporter Permease; Lantibiotic Transport-Associated PermeaG/MutG; Bacteriocin ABC Transporter; Transporter Protein; Bacteriocin ABC Transporter Permease Subunit; Bacteriocin Abc Transporter; Antibiotic ABC Transporter Protein MutG; Bacteriocin ABC Transporter Permease Protein Subunit; Lantibiotic ABC Transporter Permease Protein; Antibiotic ABC Transporter; Subtilin ABC Transporter Permease
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTTIYRLMKSDFIKLKRTSFYWIHICVPLIGAFLFLWYFSFSLLSSTGKVQGYLESIALAYPVIIGIVTSMVVDQESMAG GFKEILGTEYGKGKCLISKVLILLFTGFLSTILAIGIFFIGFQYVLKQNLLSLNFYIYVTLIIFGSQIFLYLFHLWISFI LGNGGSIGIGIFESLISALMITGLGDGIWQWIPCSWGMRLINYFSANWVNEGIKSSEFLNFYVGIQNSIVLTILLAICFA IWFKFYEGRKYV
Sequences:
>Translated_252_residues MTTIYRLMKSDFIKLKRTSFYWIHICVPLIGAFLFLWYFSFSLLSSTGKVQGYLESIALAYPVIIGIVTSMVVDQESMAG GFKEILGTEYGKGKCLISKVLILLFTGFLSTILAIGIFFIGFQYVLKQNLLSLNFYIYVTLIIFGSQIFLYLFHLWISFI LGNGGSIGIGIFESLISALMITGLGDGIWQWIPCSWGMRLINYFSANWVNEGIKSSEFLNFYVGIQNSIVLTILLAICFA IWFKFYEGRKYV >Mature_251_residues TTIYRLMKSDFIKLKRTSFYWIHICVPLIGAFLFLWYFSFSLLSSTGKVQGYLESIALAYPVIIGIVTSMVVDQESMAGG FKEILGTEYGKGKCLISKVLILLFTGFLSTILAIGIFFIGFQYVLKQNLLSLNFYIYVTLIIFGSQIFLYLFHLWISFIL GNGGSIGIGIFESLISALMITGLGDGIWQWIPCSWGMRLINYFSANWVNEGIKSSEFLNFYVGIQNSIVLTILLAICFAI WFKFYEGRKYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28632; Mature: 28500
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIYRLMKSDFIKLKRTSFYWIHICVPLIGAFLFLWYFSFSLLSSTGKVQGYLESIALA CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH YPVIIGIVTSMVVDQESMAGGFKEILGTEYGKGKCLISKVLILLFTGFLSTILAIGIFFI HHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GFQYVLKQNLLSLNFYIYVTLIIFGSQIFLYLFHLWISFILGNGGSIGIGIFESLISALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ITGLGDGIWQWIPCSWGMRLINYFSANWVNEGIKSSEFLNFYVGIQNSIVLTILLAICFA HHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH IWFKFYEGRKYV HHHHHHCCCCCC >Mature Secondary Structure TTIYRLMKSDFIKLKRTSFYWIHICVPLIGAFLFLWYFSFSLLSSTGKVQGYLESIALA HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH YPVIIGIVTSMVVDQESMAGGFKEILGTEYGKGKCLISKVLILLFTGFLSTILAIGIFFI HHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GFQYVLKQNLLSLNFYIYVTLIIFGSQIFLYLFHLWISFILGNGGSIGIGIFESLISALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ITGLGDGIWQWIPCSWGMRLINYFSANWVNEGIKSSEFLNFYVGIQNSIVLTILLAICFA HHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH IWFKFYEGRKYV HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA