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The map label for this gene is 187933886

Identifier: 187933886

GI number: 187933886

Start: 3348347

End: 3349237

Strand: Reverse

Name: 187933886

Synonym: CLL_A3214

Alternate gene names: NA

Gene position: 3349237-3348347 (Counterclockwise)

Preceding gene: 187934513

Following gene: 187935105

Centisome position: 88.13

GC content: 32.32

Gene sequence:

>891_bases
ATGATGTATAAGATAGTTAGTAAAAGAGAGCTTACAAATAATATATTTTTAATGGATATAGAAGCTCCAAGAGTAGCAAA
ATCAGCAAAACCTGGTCAATTTATTATTATAAAGAATGATGAAAAGGGTGAAAGAATTCCTTTAACAATAGCAGATTACA
ATAAGGATAAGGGAACTGTAACAATAGTTTTCCAAACTGTTGGACAAGGAACTAAACAATTAGCGACTTTTGAAGAAGGC
GACTATGTTTGTGACTTTGTTGGACCATTAGGTCAACCAAGTGAATTTGTTCATGAAAATTTAGAAGAACTAAAGAAACA
AAATATTATTTTCATAGCAGGTGGAGTTGGTGCTGCACCAGTTTATCCTCAAGTTAAATGGATGCATGAAAATGGAATGA
AATGTGATGTTATAGTTGGTTCAAGAAATAAAGAATTATTAATATTAGAAGAAGAAATGAAAAAAGTTGCAGGAAATCTT
TACATAGCAACTGATGATGGATCATACGGATTTAATGGTAGAGTTACTGATTGCTTAAATGATTTAGTTCAAAAAGGAAA
TAAATATGATCATGCAGTAGTTATTGGACCTATGATAATGATGAAATTTATGGCTGCTTTAACTAAAGAGCTTGGAATCA
AAACAACTGTTAGCTTAAATCCAATTATGGTAGATGGTACAGGTATGTGTGGTGCTTGTAGAGTTACTGTTGGAAATGAA
GTTAAATTTGCTTGTGTTGATGGACCAGAATTTGATGGACATTTAGTTAATTTTGATGAATCAATGAGAAGACAAACTAT
GTACAAAAGTGAAGAGGGAAGAGCGCAATTAAAGATTGAAGAAGGGGACACTCATAGCCACGGTGGTTGTGGATGTAAAG
GTGATAAATAA

Upstream 100 bases:

>100_bases
ATTAAAACTATAAATTGAAAAATGTAACATAAATAGATATTGAAACCATTGATTACATATGTAAAAACAGTTAAAATTGA
TAAAAACTATAGGGGGACAA

Downstream 100 bases:

>100_bases
TGAATATGCAAGATAGAATGAAAAGAACACCTGTTACTGAACAAGCTCCAGAATTAAGAGCTAAGAATTTTGAAGAAGTA
TGTTTAGGATATAATGAAGA

Product: ferredoxin-NADP(+) reductase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MMYKIVSKRELTNNIFLMDIEAPRVAKSAKPGQFIIIKNDEKGERIPLTIADYNKDKGTVTIVFQTVGQGTKQLATFEEG
DYVCDFVGPLGQPSEFVHENLEELKKQNIIFIAGGVGAAPVYPQVKWMHENGMKCDVIVGSRNKELLILEEEMKKVAGNL
YIATDDGSYGFNGRVTDCLNDLVQKGNKYDHAVVIGPMIMMKFMAALTKELGIKTTVSLNPIMVDGTGMCGACRVTVGNE
VKFACVDGPEFDGHLVNFDESMRRQTMYKSEEGRAQLKIEEGDTHSHGGCGCKGDK

Sequences:

>Translated_296_residues
MMYKIVSKRELTNNIFLMDIEAPRVAKSAKPGQFIIIKNDEKGERIPLTIADYNKDKGTVTIVFQTVGQGTKQLATFEEG
DYVCDFVGPLGQPSEFVHENLEELKKQNIIFIAGGVGAAPVYPQVKWMHENGMKCDVIVGSRNKELLILEEEMKKVAGNL
YIATDDGSYGFNGRVTDCLNDLVQKGNKYDHAVVIGPMIMMKFMAALTKELGIKTTVSLNPIMVDGTGMCGACRVTVGNE
VKFACVDGPEFDGHLVNFDESMRRQTMYKSEEGRAQLKIEEGDTHSHGGCGCKGDK
>Mature_296_residues
MMYKIVSKRELTNNIFLMDIEAPRVAKSAKPGQFIIIKNDEKGERIPLTIADYNKDKGTVTIVFQTVGQGTKQLATFEEG
DYVCDFVGPLGQPSEFVHENLEELKKQNIIFIAGGVGAAPVYPQVKWMHENGMKCDVIVGSRNKELLILEEEMKKVAGNL
YIATDDGSYGFNGRVTDCLNDLVQKGNKYDHAVVIGPMIMMKFMAALTKELGIKTTVSLNPIMVDGTGMCGACRVTVGNE
VKFACVDGPEFDGHLVNFDESMRRQTMYKSEEGRAQLKIEEGDTHSHGGCGCKGDK

Specific function: Unknown

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 32647; Mature: 32647

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMYKIVSKRELTNNIFLMDIEAPRVAKSAKPGQFIIIKNDEKGERIPLTIADYNKDKGTV
CCEEECCCHHCCCCEEEEEECCCCHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCEE
TIVFQTVGQGTKQLATFEEGDYVCDFVGPLGQPSEFVHENLEELKKQNIIFIAGGVGAAP
EEEEEECCCCCHHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCC
VYPQVKWMHENGMKCDVIVGSRNKELLILEEEMKKVAGNLYIATDDGSYGFNGRVTDCLN
CCCCEEEEECCCCEEEEEECCCCCEEEEEHHHHHHHHCCEEEEECCCCCCCCCCHHHHHH
DLVQKGNKYDHAVVIGPMIMMKFMAALTKELGIKTTVSLNPIMVDGTGMCGACRVTVGNE
HHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEEEECCC
VKFACVDGPEFDGHLVNFDESMRRQTMYKSEEGRAQLKIEEGDTHSHGGCGCKGDK
EEEEEECCCCCCCEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMYKIVSKRELTNNIFLMDIEAPRVAKSAKPGQFIIIKNDEKGERIPLTIADYNKDKGTV
CCEEECCCHHCCCCEEEEEECCCCHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCEE
TIVFQTVGQGTKQLATFEEGDYVCDFVGPLGQPSEFVHENLEELKKQNIIFIAGGVGAAP
EEEEEECCCCCHHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCC
VYPQVKWMHENGMKCDVIVGSRNKELLILEEEMKKVAGNLYIATDDGSYGFNGRVTDCLN
CCCCEEEEECCCCEEEEEECCCCCEEEEEHHHHHHHHCCEEEEECCCCCCCCCCHHHHHH
DLVQKGNKYDHAVVIGPMIMMKFMAALTKELGIKTTVSLNPIMVDGTGMCGACRVTVGNE
HHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEEEECCC
VKFACVDGPEFDGHLVNFDESMRRQTMYKSEEGRAQLKIEEGDTHSHGGCGCKGDK
EEEEEECCCCCCCEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA