| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933655
Identifier: 187933655
GI number: 187933655
Start: 1942981
End: 1943937
Strand: Reverse
Name: 187933655
Synonym: CLL_A1850
Alternate gene names: NA
Gene position: 1943937-1942981 (Counterclockwise)
Preceding gene: 187933521
Following gene: 187935086
Centisome position: 51.15
GC content: 21.32
Gene sequence:
>957_bases TTGGAAACAAAAAAAATGACAGAAGCAGGAGTTCTTACAGCTGTATTTGTAATAATAAGCATTATAGCAATTGGTACAGG AGTTGGATATTTGGGCTATTTAGATTTTATGGTTCCAATAATTACTACGCTTATATACCTAAGATGTGGTTTTAAATATA CATTATTATCTAGTGTATCTTCAATTCTAATAATAGCATTAACTATAGGAGATGTGGTTTCAGGAATTTGTATAAGTCAA AGTATGGTATTAGGATTTATATGTGGAATATTTGTTGAAAAGAAAGAAACAATTTTAGATGATTTATTTTATTGTTCAAT ACTGTCATGTGTTGTTATGGTTATAATTGATATAAACTTTTCTAATATATTAGGATATAGCTTACTTAAAGAATCTCAAA TATATGTGGATAAATTATTATTTTTAAATCCAACATTGAAAAATGTTTCATATTACATTTTAATAATATCACTTCCAATA GGAACTACATTTATAACATATATTGCATCATTATTTTTAGGAAAAAAATTAAATCTACTAAATTGTGTGTCAAATAAGAA ATTTTTAGTTATAAGAAATTTTAAAAAGTATGGAATAGTAATTTGTTGTTCTAAGAAAATCATAAACATTGGGATAGTGT ATTTGTTAAGTATGTATATATTGTATTTAAATATAGAAATAAGTAAATTTGTTCATTTAAATATAATATTTAATTCAATA AAATATATAGTTATATACTTTTTATTACAAGATAGTTATAAGTATATAAATAGGATGATTTATATATTAACAAAGTCTAA ATTTTCAATAATTTTAATGGAGATTATAGCTTTGTATATGCTTATAAATTATTTTACAAAAACAGCAATAGCGTTAATTA GTATCTCATTTATTATGGATAATATTTTGAATTTAAGAGAAAAACAAATAGTTTTTTTAAATAAGATGGTAATATAA
Upstream 100 bases:
>100_bases TTAGTAAATTAAGTATAATATAATTTCACTTTAATATTTATGCATAGTTGATATATAATAGTAATTAACAATATTAGATT AAATGAATAAGGTGAATAAA
Downstream 100 bases:
>100_bases TAAATTAGAATAAAAATACAAGAACATACATGTGTACTTCTTGTATTTTTATTTCTTTTTTAACATGCGTAGCATCTACA ATGTAATTTCTTTTCAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues METKKMTEAGVLTAVFVIISIIAIGTGVGYLGYLDFMVPIITTLIYLRCGFKYTLLSSVSSILIIALTIGDVVSGICISQ SMVLGFICGIFVEKKETILDDLFYCSILSCVVMVIIDINFSNILGYSLLKESQIYVDKLLFLNPTLKNVSYYILIISLPI GTTFITYIASLFLGKKLNLLNCVSNKKFLVIRNFKKYGIVICCSKKIINIGIVYLLSMYILYLNIEISKFVHLNIIFNSI KYIVIYFLLQDSYKYINRMIYILTKSKFSIILMEIIALYMLINYFTKTAIALISISFIMDNILNLREKQIVFLNKMVI
Sequences:
>Translated_318_residues METKKMTEAGVLTAVFVIISIIAIGTGVGYLGYLDFMVPIITTLIYLRCGFKYTLLSSVSSILIIALTIGDVVSGICISQ SMVLGFICGIFVEKKETILDDLFYCSILSCVVMVIIDINFSNILGYSLLKESQIYVDKLLFLNPTLKNVSYYILIISLPI GTTFITYIASLFLGKKLNLLNCVSNKKFLVIRNFKKYGIVICCSKKIINIGIVYLLSMYILYLNIEISKFVHLNIIFNSI KYIVIYFLLQDSYKYINRMIYILTKSKFSIILMEIIALYMLINYFTKTAIALISISFIMDNILNLREKQIVFLNKMVI >Mature_318_residues METKKMTEAGVLTAVFVIISIIAIGTGVGYLGYLDFMVPIITTLIYLRCGFKYTLLSSVSSILIIALTIGDVVSGICISQ SMVLGFICGIFVEKKETILDDLFYCSILSCVVMVIIDINFSNILGYSLLKESQIYVDKLLFLNPTLKNVSYYILIISLPI GTTFITYIASLFLGKKLNLLNCVSNKKFLVIRNFKKYGIVICCSKKIINIGIVYLLSMYILYLNIEISKFVHLNIIFNSI KYIVIYFLLQDSYKYINRMIYILTKSKFSIILMEIIALYMLINYFTKTAIALISISFIMDNILNLREKQIVFLNKMVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36174; Mature: 36174
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKKMTEAGVLTAVFVIISIIAIGTGVGYLGYLDFMVPIITTLIYLRCGFKYTLLSSVS CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SILIIALTIGDVVSGICISQSMVLGFICGIFVEKKETILDDLFYCSILSCVVMVIIDINF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SNILGYSLLKESQIYVDKLLFLNPTLKNVSYYILIISLPIGTTFITYIASLFLGKKLNLL HHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCHH NCVSNKKFLVIRNFKKYGIVICCSKKIINIGIVYLLSMYILYLNIEISKFVHLNIIFNSI HHCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEHHHEEEHHHHHHHH KYIVIYFLLQDSYKYINRMIYILTKSKFSIILMEIIALYMLINYFTKTAIALISISFIMD HHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NILNLREKQIVFLNKMVI HHHHHHHHHHHHHHHHCC >Mature Secondary Structure METKKMTEAGVLTAVFVIISIIAIGTGVGYLGYLDFMVPIITTLIYLRCGFKYTLLSSVS CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SILIIALTIGDVVSGICISQSMVLGFICGIFVEKKETILDDLFYCSILSCVVMVIIDINF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SNILGYSLLKESQIYVDKLLFLNPTLKNVSYYILIISLPIGTTFITYIASLFLGKKLNLL HHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCHH NCVSNKKFLVIRNFKKYGIVICCSKKIINIGIVYLLSMYILYLNIEISKFVHLNIIFNSI HHCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEHHHEEEHHHHHHHH KYIVIYFLLQDSYKYINRMIYILTKSKFSIILMEIIALYMLINYFTKTAIALISISFIMD HHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NILNLREKQIVFLNKMVI HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA