| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932962
Identifier: 187932962
GI number: 187932962
Start: 2779711
End: 2780340
Strand: Reverse
Name: 187932962
Synonym: CLL_A2659
Alternate gene names: NA
Gene position: 2780340-2779711 (Counterclockwise)
Preceding gene: 187935779
Following gene: 187935446
Centisome position: 73.16
GC content: 21.27
Gene sequence:
>630_bases TTGCTAATGAGAAATAGACTTGAATATTCATCGATAAAATTGACTTCCATTGACAATAAAATAATAACTATGGGAATAGT TGAAAAATTTCAAAAAGATACTTTAATTATATGTGCTAATGAAAAAACTGAATTGAAAATTCATGAGGAAGTCTTTATAA ATATTTTTAATAATAATCAGGGAATATCTATATATAGTGGTATTATAAATAATATATTAGAAAATACTATAGTAGTTAAA AATATATTATTTCTACTTGATAAAGAAAGGCGAAACAACAATAGAATTATTGTAAATATGCATTTAAAGGTAGCGGAGAT AAGGAATGTATCTGAAAAAGTAATAAAATTATCTAAACCTATTTTTATGACAAGTAAAAATTTAAGCATTAGAGGAATAT TGTTAGAATGCGTTTTAGATATTCCTAAAGGTGTTAATTTTTTTATTGAGTTACCTATAGAAGATAAAAAAATACATATA GAAACTATTACTAAAAGAAAGTATGAAAAGGATAATTTATATTATTATGGCTGTGAATTTATATTAAAAGATGCAGAACA AAATAATCTTTTAGAAAATTTTATACTTAAAAATTATAATGCCAAGTTTTTTAAATATTACCCAAAATAA
Upstream 100 bases:
>100_bases AAATTTTAACACGAATATATAATGGAAATATTAATCTTATATAGAAAATTATATTAATTAAGATTAATAAAAATATAATG TTAGGAGGAAGTTTACAAAT
Downstream 100 bases:
>100_bases TTTAAAATGTATACAAGTAAAATAATAATTTACTATGAAATTTAGGACGATAAATTAAGTATTTATGGTCTTTTTCTATT GGTATAAATTTTTTGTATAA
Product: type IV pilus assembly protein PilZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MLMRNRLEYSSIKLTSIDNKIITMGIVEKFQKDTLIICANEKTELKIHEEVFINIFNNNQGISIYSGIINNILENTIVVK NILFLLDKERRNNNRIIVNMHLKVAEIRNVSEKVIKLSKPIFMTSKNLSIRGILLECVLDIPKGVNFFIELPIEDKKIHI ETITKRKYEKDNLYYYGCEFILKDAEQNNLLENFILKNYNAKFFKYYPK
Sequences:
>Translated_209_residues MLMRNRLEYSSIKLTSIDNKIITMGIVEKFQKDTLIICANEKTELKIHEEVFINIFNNNQGISIYSGIINNILENTIVVK NILFLLDKERRNNNRIIVNMHLKVAEIRNVSEKVIKLSKPIFMTSKNLSIRGILLECVLDIPKGVNFFIELPIEDKKIHI ETITKRKYEKDNLYYYGCEFILKDAEQNNLLENFILKNYNAKFFKYYPK >Mature_209_residues MLMRNRLEYSSIKLTSIDNKIITMGIVEKFQKDTLIICANEKTELKIHEEVFINIFNNNQGISIYSGIINNILENTIVVK NILFLLDKERRNNNRIIVNMHLKVAEIRNVSEKVIKLSKPIFMTSKNLSIRGILLECVLDIPKGVNFFIELPIEDKKIHI ETITKRKYEKDNLYYYGCEFILKDAEQNNLLENFILKNYNAKFFKYYPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24657; Mature: 24657
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMRNRLEYSSIKLTSIDNKIITMGIVEKFQKDTLIICANEKTELKIHEEVFINIFNNNQ CCCCCCCCCCEEEEEECCCEEEEHHHHHHHCCCEEEEEECCCCEEEEEEEEEEEEEECCC GISIYSGIINNILENTIVVKNILFLLDKERRNNNRIIVNMHLKVAEIRNVSEKVIKLSKP CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHHCCC IFMTSKNLSIRGILLECVLDIPKGVNFFIELPIEDKKIHIETITKRKYEKDNLYYYGCEF EEEECCCCEEHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEE ILKDAEQNNLLENFILKNYNAKFFKYYPK EEECCCCCHHHHHHHHCCCCCEEEEECCC >Mature Secondary Structure MLMRNRLEYSSIKLTSIDNKIITMGIVEKFQKDTLIICANEKTELKIHEEVFINIFNNNQ CCCCCCCCCCEEEEEECCCEEEEHHHHHHHCCCEEEEEECCCCEEEEEEEEEEEEEECCC GISIYSGIINNILENTIVVKNILFLLDKERRNNNRIIVNMHLKVAEIRNVSEKVIKLSKP CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHHCCC IFMTSKNLSIRGILLECVLDIPKGVNFFIELPIEDKKIHIETITKRKYEKDNLYYYGCEF EEEECCCCEEHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEE ILKDAEQNNLLENFILKNYNAKFFKYYPK EEECCCCCHHHHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA