| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932744
Identifier: 187932744
GI number: 187932744
Start: 1356732
End: 1357355
Strand: Reverse
Name: 187932744
Synonym: CLL_A1321
Alternate gene names: NA
Gene position: 1357355-1356732 (Counterclockwise)
Preceding gene: 187934090
Following gene: 187933611
Centisome position: 35.72
GC content: 22.92
Gene sequence:
>624_bases ATGAATATTTTTTCTCCATTATTATTATCACTTTCATCACATTTAGATACTTTTAGAGTTTCAAATTTTTGTAGCTTAAA AAAAGTGTCTATAGAAAAAGCACAAATTTTACTTATTTCAATTATTACAACATTTACAACATTTATTTCTATGTGTATTG GAGAATTAATTAGTAAACTTTTATTAAAAGAAATAGTAATTCCATTTGGATGCGTACTTTTAATATTTATAGGGACTTAC TTTTTTGTTGAACATATAAGACTAAAAAAGAAAAGTCGTAATGAAGATACATCTTACTATGTAGAAGATAACTCAAGATT TGGTTTGCTATTGAAAGAAGGAAACATGTCACCATTTGCTAATTCTAACCATATAAGTTTTAAAGATACCTTATCATTAT CTATTTTTCTTTCAAAAACAAATATATTATTAGGTTTAATTGCAGGACTTCTTAATATAAGCATACCTTTGAGTATATTT TTTAGTTTCATAATAAGTATATTAATGATTTTGATTGGAAATTTTATAACAAAATTTTCTTTTTTAAGTTGGTTAACTAA AAATTTTTACGTATTTTCAGGTACCCTTTTAATTTTTTGGGGACTTTGTGAATACTTATTATAA
Upstream 100 bases:
>100_bases TTATCAAAAGACTATTGAGGTATATTATTTAGTGTTACTTTTTGTCATTTTTAAAACTTTTGAATATATTGTTATTAAAT CAATCTTTTTGAGGTAATCT
Downstream 100 bases:
>100_bases AGAATAATTTATATTGCTAAAAAGCCTTAGAATAAAACTTAGTTTAAGTAAATTCTAAGGCTTTTATTGGTTAAGTTTTA ATGTTAATCTTGATATTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNIFSPLLLSLSSHLDTFRVSNFCSLKKVSIEKAQILLISIITTFTTFISMCIGELISKLLLKEIVIPFGCVLLIFIGTY FFVEHIRLKKKSRNEDTSYYVEDNSRFGLLLKEGNMSPFANSNHISFKDTLSLSIFLSKTNILLGLIAGLLNISIPLSIF FSFIISILMILIGNFITKFSFLSWLTKNFYVFSGTLLIFWGLCEYLL
Sequences:
>Translated_207_residues MNIFSPLLLSLSSHLDTFRVSNFCSLKKVSIEKAQILLISIITTFTTFISMCIGELISKLLLKEIVIPFGCVLLIFIGTY FFVEHIRLKKKSRNEDTSYYVEDNSRFGLLLKEGNMSPFANSNHISFKDTLSLSIFLSKTNILLGLIAGLLNISIPLSIF FSFIISILMILIGNFITKFSFLSWLTKNFYVFSGTLLIFWGLCEYLL >Mature_207_residues MNIFSPLLLSLSSHLDTFRVSNFCSLKKVSIEKAQILLISIITTFTTFISMCIGELISKLLLKEIVIPFGCVLLIFIGTY FFVEHIRLKKKSRNEDTSYYVEDNSRFGLLLKEGNMSPFANSNHISFKDTLSLSIFLSKTNILLGLIAGLLNISIPLSIF FSFIISILMILIGNFITKFSFLSWLTKNFYVFSGTLLIFWGLCEYLL
Specific function: Unknown
COG id: COG1971
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23547; Mature: 23547
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIFSPLLLSLSSHLDTFRVSNFCSLKKVSIEKAQILLISIITTFTTFISMCIGELISKL CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKEIVIPFGCVLLIFIGTYFFVEHIRLKKKSRNEDTSYYVEDNSRFGLLLKEGNMSPFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCC NSNHISFKDTLSLSIFLSKTNILLGLIAGLLNISIPLSIFFSFIISILMILIGNFITKFS CCCCCEEHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLSWLTKNFYVFSGTLLIFWGLCEYLL HHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNIFSPLLLSLSSHLDTFRVSNFCSLKKVSIEKAQILLISIITTFTTFISMCIGELISKL CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKEIVIPFGCVLLIFIGTYFFVEHIRLKKKSRNEDTSYYVEDNSRFGLLLKEGNMSPFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCC NSNHISFKDTLSLSIFLSKTNILLGLIAGLLNISIPLSIFFSFIISILMILIGNFITKFS CCCCCEEHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLSWLTKNFYVFSGTLLIFWGLCEYLL HHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA