| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934090
Identifier: 187934090
GI number: 187934090
Start: 1359613
End: 1360263
Strand: Reverse
Name: 187934090
Synonym: CLL_A1323
Alternate gene names: NA
Gene position: 1360263-1359613 (Counterclockwise)
Preceding gene: 187932384
Following gene: 187932744
Centisome position: 35.79
GC content: 23.2
Gene sequence:
>651_bases ATGGCAAAAGTAAAAAAGACTAGTATATTTCTAAGTATAGTATTAGTAATTCTTTTAACTATAAGCGCTACTTATTACAT TAGTTTTTATCCTAAAACTGAAGTTATAGATATTAATACTTCATCTAATTTTAATGGATTTGAAATACTAGATAGATTAT CAAAAAATGATTTGAATTTATCATCTAAAGAAATATCACTTGAAACATCTTTAACGCTTTCTGAAGAAGACTTAAGTTCT ATGTTTATTGGTTTAATTAAAGATAGTAATAATAAACTTTCAAATTTAATGACTGGATTAAAAGTAGATATAAATGAAAA TAAACTTAATGTTATCTTTCATTTAAAGTATAATGGAGTTCCTTTAGAGGGACATTTAGTATTCAATATGTCTGCTATAA ATGGTAAATGTGTTCTTCATTACGACAGTGGTAATGTTGGTTTTATTAGTATAAATAAGGATTTGATTTTTTCTAAATTA ATATCTAATGATGTTGTAACCTTTGATAAAACTAACGGTGATATTATTCTTTCTATAAGTAATATTGATAATATCAAGAT TAAAGATATAACAGTACAAGATCATAACATAATCATTACAATAAAAGGCAGCCTTACTTTAGATGATTTAAAGAAACTAA AATTAAACTGA
Upstream 100 bases:
>100_bases TATTTCTAATATAAAATAACATTAAAATTTATTTCCTAATTTCTATTACATTATAAATATTTTTCAACACACAATATTAA ACTAAAGGAGATTAAAAATT
Downstream 100 bases:
>100_bases ATAAAAAATTAACTATACTAATATCTAGTTCTGAGGCTGTAAATATTTTTATGTATTTTTAACTAAAGTTATTTTTAATC ATTTTTATTATACCTTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MAKVKKTSIFLSIVLVILLTISATYYISFYPKTEVIDINTSSNFNGFEILDRLSKNDLNLSSKEISLETSLTLSEEDLSS MFIGLIKDSNNKLSNLMTGLKVDINENKLNVIFHLKYNGVPLEGHLVFNMSAINGKCVLHYDSGNVGFISINKDLIFSKL ISNDVVTFDKTNGDIILSISNIDNIKIKDITVQDHNIIITIKGSLTLDDLKKLKLN
Sequences:
>Translated_216_residues MAKVKKTSIFLSIVLVILLTISATYYISFYPKTEVIDINTSSNFNGFEILDRLSKNDLNLSSKEISLETSLTLSEEDLSS MFIGLIKDSNNKLSNLMTGLKVDINENKLNVIFHLKYNGVPLEGHLVFNMSAINGKCVLHYDSGNVGFISINKDLIFSKL ISNDVVTFDKTNGDIILSISNIDNIKIKDITVQDHNIIITIKGSLTLDDLKKLKLN >Mature_215_residues AKVKKTSIFLSIVLVILLTISATYYISFYPKTEVIDINTSSNFNGFEILDRLSKNDLNLSSKEISLETSLTLSEEDLSSM FIGLIKDSNNKLSNLMTGLKVDINENKLNVIFHLKYNGVPLEGHLVFNMSAINGKCVLHYDSGNVGFISINKDLIFSKLI SNDVVTFDKTNGDIILSISNIDNIKIKDITVQDHNIIITIKGSLTLDDLKKLKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24077; Mature: 23946
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVKKTSIFLSIVLVILLTISATYYISFYPKTEVIDINTSSNFNGFEILDRLSKNDLNL CCCEEHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCCC SSKEISLETSLTLSEEDLSSMFIGLIKDSNNKLSNLMTGLKVDINENKLNVIFHLKYNGV CCCEEEEEEEEEECHHHHHCEEEEEEECCCCHHHHHHCCEEEEECCCEEEEEEEEEECCE PLEGHLVFNMSAINGKCVLHYDSGNVGFISINKDLIFSKLISNDVVTFDKTNGDIILSIS EECCEEEEEEEECCCEEEEEECCCCEEEEEECHHHHHHHHHCCCEEEEECCCCEEEEEEE NIDNIKIKDITVQDHNIIITIKGSLTLDDLKKLKLN CCCCEEEEEEEEECCEEEEEEECCEEHHHHHEECCC >Mature Secondary Structure AKVKKTSIFLSIVLVILLTISATYYISFYPKTEVIDINTSSNFNGFEILDRLSKNDLNL CCEEHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCCC SSKEISLETSLTLSEEDLSSMFIGLIKDSNNKLSNLMTGLKVDINENKLNVIFHLKYNGV CCCEEEEEEEEEECHHHHHCEEEEEEECCCCHHHHHHCCEEEEECCCEEEEEEEEEECCE PLEGHLVFNMSAINGKCVLHYDSGNVGFISINKDLIFSKLISNDVVTFDKTNGDIILSIS EECCEEEEEEEECCCEEEEEECCCCEEEEEECHHHHHHHHHCCCEEEEECCCCEEEEEEE NIDNIKIKDITVQDHNIIITIKGSLTLDDLKKLKLN CCCCEEEEEEEEECCEEEEEEECCEEHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA