| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932740
Identifier: 187932740
GI number: 187932740
Start: 2791220
End: 2791744
Strand: Reverse
Name: 187932740
Synonym: CLL_A2676
Alternate gene names: NA
Gene position: 2791744-2791220 (Counterclockwise)
Preceding gene: 187933618
Following gene: 187933404
Centisome position: 73.46
GC content: 28.38
Gene sequence:
>525_bases ATGGATATTAGGGAATTTAGTTTATTAGAACATAATAATGTATCAGTAAATTGGGAAAAAGTAGAGGTAGAACTTGGGTT TGTAATATGTCAGGATGTAAAAGATTTTTTTTCAAGAATAGCTGGAGGTTATATAAAGGAAATAGTAGATTTTAAAGAAA ATTATTTTTTTAACACAACAGGAAATTATGAGTATGATCACTGGATTTCATTTAATGAGTGTGAAGGAGAAATTGAACTA TCTTTAATCACTCCAAAAAGTGAAGATAATATTGAGAATTTTATAATAAATGCTTTTAGAGAATGGACTGGTGGCAATGA TTTTGGACATAGAGTTTTGCTGGGGGATTTTGAATTTAACATTGGTGGCGTACTAATTTTGATTAATAACGATAGTGGTA AAGTTGAATGGATAGACTGTGGATATGGATATTTTGATATTTATGAAGAAAATCCTAATGGTGTTGTTGCAAATAGTTTA CAAGAATTTTTAGATAAATGTGTAGATAAGAGGTTAGATGATTAA
Upstream 100 bases:
>100_bases TAATACAAAATAGTGAACTATTATTTATAAGTAAATATTTTAAATTTATTTCACTAAGCGAAGGCAAGAATATAAATATA ATAAAACAGGAGAAAGAAAT
Downstream 100 bases:
>100_bases TAGATAAATAGTAGCTATAATTTAAAAATATTTATATTGTTTTTGAGGAAAGTATGAAATGAATAGAAGATTATTATTAT ACAAAAAATTTATTGATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MDIREFSLLEHNNVSVNWEKVEVELGFVICQDVKDFFSRIAGGYIKEIVDFKENYFFNTTGNYEYDHWISFNECEGEIEL SLITPKSEDNIENFIINAFREWTGGNDFGHRVLLGDFEFNIGGVLILINNDSGKVEWIDCGYGYFDIYEENPNGVVANSL QEFLDKCVDKRLDD
Sequences:
>Translated_174_residues MDIREFSLLEHNNVSVNWEKVEVELGFVICQDVKDFFSRIAGGYIKEIVDFKENYFFNTTGNYEYDHWISFNECEGEIEL SLITPKSEDNIENFIINAFREWTGGNDFGHRVLLGDFEFNIGGVLILINNDSGKVEWIDCGYGYFDIYEENPNGVVANSL QEFLDKCVDKRLDD >Mature_174_residues MDIREFSLLEHNNVSVNWEKVEVELGFVICQDVKDFFSRIAGGYIKEIVDFKENYFFNTTGNYEYDHWISFNECEGEIEL SLITPKSEDNIENFIINAFREWTGGNDFGHRVLLGDFEFNIGGVLILINNDSGKVEWIDCGYGYFDIYEENPNGVVANSL QEFLDKCVDKRLDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20201; Mature: 20201
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIREFSLLEHNNVSVNWEKVEVELGFVICQDVKDFFSRIAGGYIKEIVDFKENYFFNTT CCCCCCEEEECCCCEEEEEEEEEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHCEEECCC GNYEYDHWISFNECEGEIELSLITPKSEDNIENFIINAFREWTGGNDFGHRVLLGDFEFN CCCCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC IGGVLILINNDSGKVEWIDCGYGYFDIYEENPNGVVANSLQEFLDKCVDKRLDD CCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCEEHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDIREFSLLEHNNVSVNWEKVEVELGFVICQDVKDFFSRIAGGYIKEIVDFKENYFFNTT CCCCCCEEEECCCCEEEEEEEEEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHCEEECCC GNYEYDHWISFNECEGEIELSLITPKSEDNIENFIINAFREWTGGNDFGHRVLLGDFEFN CCCCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC IGGVLILINNDSGKVEWIDCGYGYFDIYEENPNGVVANSLQEFLDKCVDKRLDD CCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCEEHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA