| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187933618
Identifier: 187933618
GI number: 187933618
Start: 2791875
End: 2792501
Strand: Reverse
Name: 187933618
Synonym: CLL_A2677
Alternate gene names: NA
Gene position: 2792501-2791875 (Counterclockwise)
Preceding gene: 187932613
Following gene: 187932740
Centisome position: 73.48
GC content: 25.04
Gene sequence:
>627_bases ATGGGATTATTTGATAAATTTAAGAAGAGAAAGATTAATAAAGAGTATGATGAAAATGTAACATTTTCACATTTTATAAA TACATTTAAGCCATCTAATAATTTGTTAAAACCTACAGAAGAGGAACTTAAACAATTTAAAAATTCATTACCAACTGAAT TATTGAATTTTTGGAAAGAATATGGATTTGGAAATTATGGTGATGGAATAATCAAAGTTATTAATCCACTTGAATATATG GAGAATTTCTATGAATGGCTTGGTAAGGAAGATTTTTCTAAAATACCTATTATATTAACTGCTTTTGGAGATGTTTTTTA TTACAGAAAATTACAAGATGATGTTGAAGATATATGTCTTCTTAGTATTCATTATAGAAATAGTATAGTATGTTCATACA GTTTACAGGAGTTTTTTAAATCATATATAGTAAATGAACAAATTTATAATGAAGTATTAAGGAGAAAATTATTTCAACAA GCATATGCTGTTAAAGGGAGTTTAGAATTAAATCAGATATATTTCTTTACACCAGCACTGGTTTTAGGTGGTAAAGAATT AATAGAATCAATTGATAGAGGAGATGCCAATATACATCAAAGTATATTACTTCAATCAGGAAAATAA
Upstream 100 bases:
>100_bases TTGGATATAATGAAAACGCAGAATGGGATAAAGTTGGAACAGATACTTAAAAGATATAAATCTGTATAGACAAATGAATT TTATTTAAAGGAGAAATAAC
Downstream 100 bases:
>100_bases AATTTTTATTATTGTGTACATAAAAATAAGTAATACAAAATAGTGAACTATTATTTATAAGTAAATATTTTAAATTTATT TCACTAAGCGAAGGCAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: GAD-Like Protein
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MGLFDKFKKRKINKEYDENVTFSHFINTFKPSNNLLKPTEEELKQFKNSLPTELLNFWKEYGFGNYGDGIIKVINPLEYM ENFYEWLGKEDFSKIPIILTAFGDVFYYRKLQDDVEDICLLSIHYRNSIVCSYSLQEFFKSYIVNEQIYNEVLRRKLFQQ AYAVKGSLELNQIYFFTPALVLGGKELIESIDRGDANIHQSILLQSGK
Sequences:
>Translated_208_residues MGLFDKFKKRKINKEYDENVTFSHFINTFKPSNNLLKPTEEELKQFKNSLPTELLNFWKEYGFGNYGDGIIKVINPLEYM ENFYEWLGKEDFSKIPIILTAFGDVFYYRKLQDDVEDICLLSIHYRNSIVCSYSLQEFFKSYIVNEQIYNEVLRRKLFQQ AYAVKGSLELNQIYFFTPALVLGGKELIESIDRGDANIHQSILLQSGK >Mature_207_residues GLFDKFKKRKINKEYDENVTFSHFINTFKPSNNLLKPTEEELKQFKNSLPTELLNFWKEYGFGNYGDGIIKVINPLEYME NFYEWLGKEDFSKIPIILTAFGDVFYYRKLQDDVEDICLLSIHYRNSIVCSYSLQEFFKSYIVNEQIYNEVLRRKLFQQA YAVKGSLELNQIYFFTPALVLGGKELIESIDRGDANIHQSILLQSGK
Specific function: Unknown
COG id: COG5620
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24499; Mature: 24368
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFDKFKKRKINKEYDENVTFSHFINTFKPSNNLLKPTEEELKQFKNSLPTELLNFWKE CCHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH YGFGNYGDGIIKVINPLEYMENFYEWLGKEDFSKIPIILTAFGDVFYYRKLQDDVEDICL CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LSIHYRNSIVCSYSLQEFFKSYIVNEQIYNEVLRRKLFQQAYAVKGSLELNQIYFFTPAL HEEECCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEECHHHEEHHHH VLGGKELIESIDRGDANIHQSILLQSGK HHCCHHHHHHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure GLFDKFKKRKINKEYDENVTFSHFINTFKPSNNLLKPTEEELKQFKNSLPTELLNFWKE CHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH YGFGNYGDGIIKVINPLEYMENFYEWLGKEDFSKIPIILTAFGDVFYYRKLQDDVEDICL CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LSIHYRNSIVCSYSLQEFFKSYIVNEQIYNEVLRRKLFQQAYAVKGSLELNQIYFFTPAL HEEECCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEECHHHEEHHHH VLGGKELIESIDRGDANIHQSILLQSGK HHCCHHHHHHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA