| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is hrsA [H]
Identifier: 187932440
GI number: 187932440
Start: 2225210
End: 2227159
Strand: Reverse
Name: hrsA [H]
Synonym: CLL_A2126
Alternate gene names: 187932440
Gene position: 2227159-2225210 (Counterclockwise)
Preceding gene: 187934752
Following gene: 187933668
Centisome position: 58.6
GC content: 31.79
Gene sequence:
>1950_bases ATGGATTTAAAAAAAATGACAAATGAAAAACTTGTTCTTTTAAATCAAACATATGGAAATAAAGAAGAAGTTATTAAAAA ATTAATTGAAAAATTATATGAAGAAAAAGTAATTACATCAAAAGAAGGATTCTTCGATGTGGTTATGGAAAGGGAAGCTC ATTCTCCAACAGGATTAGAAAGGGGAGTAGCAATTCCTCATGGTAAGTCGGAAATAGTTAAGAAGGCTGCTTTTGCTGTT GCAAGATTAGAAAAGCCATTAACTGATTGGGAAAGTGTTACTGAAGATAATAATGTAGATTTAGTATTCTTATTAGCTAT ACCTAAGTCAGAAGAAGGATCTACTCATTTAAAATTATTAGCTGAATTATCTTCTGCTTTAATGTATGAAGATTTTACTA CAAATATAAAAAATGCTAAAAATTCAAAACAATTATTAGAAGCTTTAGATTATAAGAAAGCTGATAATGAAGTAAAAGAA TATAACAAGACTATTTTAGCTATAACAGCTTGTGCAGCAGGTATTGCTCATACATATATGTCTGCTGAAGCTTTAGAAAA AGCAGGTAAGGAAATGGGAGTTAGAGTTCTTGTTGAAAAGCAAGGAGCTAATGGAATTGAAGATAAGCACAAAGTAGCGG ATATTAAAAATGCTGATGGGGTTATTTTTGCTTGTGACATAGCCGCTAAAAATGTAGAAAGATATAATGGCAAAAACTTT ATAAAAGTTAAAGTTGCAGAACCACTAAAGGATTCTAAGGCATTAATAGAAAGAGTTTTAAATAATCCAGATGGAAAAGT TAAAGGTGATGTTCAAGAAGCATCTTCAGAGAGTGATAAGCCAAAAGGTTTATTCTCAGAAATGATGGAAGCTATAATGA CAGGGATTTCATATATGATTCCAGTTATTGTTGCTGCAGGTTTGATGATGGGTATTGCAAAGCTTTGGGCAATGGGAATC GGTCAAATTGATAACTTAGGTACTTTTGTAGAAAGTACAAATCAATTACATGTATTCCTTCATTATTTAGATAAGTTTGG TGGATTAATATTTAAGTTTATTTACCCAATATTTGCTGCATATGTTGCTTATTCAATTGCTGATAGACCAGGTCTTGTAC CAGGATTTATAGGTGGTGTATTTGCAGGTGGTTTACATTTCACATTCTGGGGAGTTAAAGATGGGATTCCTTCTGGTTTC TTAGGTGCATTAGTTTTAGGTTTAGTTGCAGGTTACTTAACAAGATTTTTAAATCAAAAAATTAAGTTATCAAAAAATTT ACAAGCTATGAAACCAATGTTTTTATTACCAGGTATCTCAGTTTTAGTAATATTTATTTTAAACTTTTATGTTGTTGATC CAGTATTTGGTGGGCTAAATGGATGGTTATCAAACATGATAGCATCATTTGATACAGGAAGTACTATGATGTTAACAGCA GTAATTGCAGCATGTACAGCATTTGACTTAGGTGGACCAGTTAACAAAGCAGCAGGTGCTATTGCAATAGGACTTGCAGC AGATTCGATTTTTCCACTAACAGGTAGAGTATTAGCAATTGTAATACCTCCAATTGGTTTAGGATTAGCTACAGTACTTG ATAAGTTTGTTGTTAAGAGAAGAGTATTTGATGAAAATTTAAGAGTTGTTGGTAACACTTCAATTTTACTTGGATTTATT GCAGTAAGTGAAGGTGCAATTCCATTTATGTTAAAGAATCCATTAATAACAATTCCAATAAACATTCTTGGAGCAATCTT AGGTTCTTGCACAGCTGTTGCATTAGGAGCAGTACAATGGAATCCATTACCAGCAATTTGGGGATGGCCTTTAGTTGAAA ATCTTTGGGCATATATTTTAGGTCTTTTAGTTGGTGTATTATTCATAGCTTTAGCTAACATCTTTATAAGATTCTACATT ATAAAAAGAGAAGAAAAGAGAAATGCTTAA
Upstream 100 bases:
>100_bases ATAGTATAACAAAATTAAAAAAATATGTGTAATAATAAAGCTGTAAAAGGTTTCAAAAGAAAAAAGTCGACTTACTTTAT TAAATAAGGGGGAAGTAAAA
Downstream 100 bases:
>100_bases TTAATTAAAAAAATAGAGAACTAAAAGCTATTTATGATAGTTTTTAGTTCCTTCATTAATAAGATATTTCAGGAGGATTG CAATGATTAAAAAAAAGGTA
Product: PTS system, fructose-specific component family
Products: NA
Alternate protein names: Putative PTS system EIIABC component; Phosphotransferase enzyme IIA component; PTS system EIIA component; Phosphotransferase enzyme IIB component; PTS system EIIB component; Permease IIC component; PTS system EIIC component [H]
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MDLKKMTNEKLVLLNQTYGNKEEVIKKLIEKLYEEKVITSKEGFFDVVMEREAHSPTGLERGVAIPHGKSEIVKKAAFAV ARLEKPLTDWESVTEDNNVDLVFLLAIPKSEEGSTHLKLLAELSSALMYEDFTTNIKNAKNSKQLLEALDYKKADNEVKE YNKTILAITACAAGIAHTYMSAEALEKAGKEMGVRVLVEKQGANGIEDKHKVADIKNADGVIFACDIAAKNVERYNGKNF IKVKVAEPLKDSKALIERVLNNPDGKVKGDVQEASSESDKPKGLFSEMMEAIMTGISYMIPVIVAAGLMMGIAKLWAMGI GQIDNLGTFVESTNQLHVFLHYLDKFGGLIFKFIYPIFAAYVAYSIADRPGLVPGFIGGVFAGGLHFTFWGVKDGIPSGF LGALVLGLVAGYLTRFLNQKIKLSKNLQAMKPMFLLPGISVLVIFILNFYVVDPVFGGLNGWLSNMIASFDTGSTMMLTA VIAACTAFDLGGPVNKAAGAIAIGLAADSIFPLTGRVLAIVIPPIGLGLATVLDKFVVKRRVFDENLRVVGNTSILLGFI AVSEGAIPFMLKNPLITIPINILGAILGSCTAVALGAVQWNPLPAIWGWPLVENLWAYILGLLVGVLFIALANIFIRFYI IKREEKRNA
Sequences:
>Translated_649_residues MDLKKMTNEKLVLLNQTYGNKEEVIKKLIEKLYEEKVITSKEGFFDVVMEREAHSPTGLERGVAIPHGKSEIVKKAAFAV ARLEKPLTDWESVTEDNNVDLVFLLAIPKSEEGSTHLKLLAELSSALMYEDFTTNIKNAKNSKQLLEALDYKKADNEVKE YNKTILAITACAAGIAHTYMSAEALEKAGKEMGVRVLVEKQGANGIEDKHKVADIKNADGVIFACDIAAKNVERYNGKNF IKVKVAEPLKDSKALIERVLNNPDGKVKGDVQEASSESDKPKGLFSEMMEAIMTGISYMIPVIVAAGLMMGIAKLWAMGI GQIDNLGTFVESTNQLHVFLHYLDKFGGLIFKFIYPIFAAYVAYSIADRPGLVPGFIGGVFAGGLHFTFWGVKDGIPSGF LGALVLGLVAGYLTRFLNQKIKLSKNLQAMKPMFLLPGISVLVIFILNFYVVDPVFGGLNGWLSNMIASFDTGSTMMLTA VIAACTAFDLGGPVNKAAGAIAIGLAADSIFPLTGRVLAIVIPPIGLGLATVLDKFVVKRRVFDENLRVVGNTSILLGFI AVSEGAIPFMLKNPLITIPINILGAILGSCTAVALGAVQWNPLPAIWGWPLVENLWAYILGLLVGVLFIALANIFIRFYI IKREEKRNA >Mature_649_residues MDLKKMTNEKLVLLNQTYGNKEEVIKKLIEKLYEEKVITSKEGFFDVVMEREAHSPTGLERGVAIPHGKSEIVKKAAFAV ARLEKPLTDWESVTEDNNVDLVFLLAIPKSEEGSTHLKLLAELSSALMYEDFTTNIKNAKNSKQLLEALDYKKADNEVKE YNKTILAITACAAGIAHTYMSAEALEKAGKEMGVRVLVEKQGANGIEDKHKVADIKNADGVIFACDIAAKNVERYNGKNF IKVKVAEPLKDSKALIERVLNNPDGKVKGDVQEASSESDKPKGLFSEMMEAIMTGISYMIPVIVAAGLMMGIAKLWAMGI GQIDNLGTFVESTNQLHVFLHYLDKFGGLIFKFIYPIFAAYVAYSIADRPGLVPGFIGGVFAGGLHFTFWGVKDGIPSGF LGALVLGLVAGYLTRFLNQKIKLSKNLQAMKPMFLLPGISVLVIFILNFYVVDPVFGGLNGWLSNMIASFDTGSTMMLTA VIAACTAFDLGGPVNKAAGAIAIGLAADSIFPLTGRVLAIVIPPIGLGLATVLDKFVVKRRVFDENLRVVGNTSILLGFI AVSEGAIPFMLKNPLITIPINILGAILGSCTAVALGAVQWNPLPAIWGWPLVENLWAYILGLLVGVLFIALANIFIRFYI IKREEKRNA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane [H]
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1786951, Length=589, Percent_Identity=37.1816638370119, Blast_Score=353, Evalue=2e-98, Organism=Escherichia coli, GI1788729, Length=379, Percent_Identity=40.1055408970976, Blast_Score=269, Evalue=3e-73, Organism=Escherichia coli, GI1788492, Length=488, Percent_Identity=33.6065573770492, Blast_Score=244, Evalue=1e-65, Organism=Escherichia coli, GI87082348, Length=452, Percent_Identity=30.3097345132743, Blast_Score=191, Evalue=1e-49, Organism=Escherichia coli, GI1790386, Length=335, Percent_Identity=31.3432835820896, Blast_Score=143, Evalue=4e-35, Organism=Escherichia coli, GI1790387, Length=95, Percent_Identity=43.1578947368421, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788730, Length=98, Percent_Identity=31.6326530612245, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI1788726, Length=152, Percent_Identity=30.2631578947368, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI48994992, Length=143, Percent_Identity=26.5734265734266, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR004715 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF00359 PTS_EIIA_2; PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 70582; Mature: 70582
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKKMTNEKLVLLNQTYGNKEEVIKKLIEKLYEEKVITSKEGFFDVVMEREAHSPTGLE CCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC RGVAIPHGKSEIVKKAAFAVARLEKPLTDWESVTEDNNVDLVFLLAIPKSEEGSTHLKLL CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHH AELSSALMYEDFTTNIKNAKNSKQLLEALDYKKADNEVKEYNKTILAITACAAGIAHTYM HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SAEALEKAGKEMGVRVLVEKQGANGIEDKHKVADIKNADGVIFACDIAAKNVERYNGKNF HHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEEHHHHHHHHCCCCCE IKVKVAEPLKDSKALIERVLNNPDGKVKGDVQEASSESDKPKGLFSEMMEAIMTGISYMI EEEEECCCCCHHHHHHHHHHCCCCCCEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH PVIVAAGLMMGIAKLWAMGIGQIDNLGTFVESTNQLHVFLHYLDKFGGLIFKFIYPIFAA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YVAYSIADRPGLVPGFIGGVFAGGLHFTFWGVKDGIPSGFLGALVLGLVAGYLTRFLNQK HHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH IKLSKNLQAMKPMFLLPGISVLVIFILNFYVVDPVFGGLNGWLSNMIASFDTGSTMMLTA HHHHCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHH VIAACTAFDLGGPVNKAAGAIAIGLAADSIFPLTGRVLAIVIPPIGLGLATVLDKFVVKR HHHHHHHHCCCCCCCHHCCCEEEEEHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH RVFDENLRVVGNTSILLGFIAVSEGAIPFMLKNPLITIPINILGAILGSCTAVALGAVQW HHHHCCCEEEECHHHHHHHHHHCCCCCCEEECCCEEEECHHHHHHHHHHHHHHHHHCCCC NPLPAIWGWPLVENLWAYILGLLVGVLFIALANIFIRFYIIKREEKRNA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHCCCC >Mature Secondary Structure MDLKKMTNEKLVLLNQTYGNKEEVIKKLIEKLYEEKVITSKEGFFDVVMEREAHSPTGLE CCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC RGVAIPHGKSEIVKKAAFAVARLEKPLTDWESVTEDNNVDLVFLLAIPKSEEGSTHLKLL CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHH AELSSALMYEDFTTNIKNAKNSKQLLEALDYKKADNEVKEYNKTILAITACAAGIAHTYM HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SAEALEKAGKEMGVRVLVEKQGANGIEDKHKVADIKNADGVIFACDIAAKNVERYNGKNF HHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEEHHHHHHHHCCCCCE IKVKVAEPLKDSKALIERVLNNPDGKVKGDVQEASSESDKPKGLFSEMMEAIMTGISYMI EEEEECCCCCHHHHHHHHHHCCCCCCEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH PVIVAAGLMMGIAKLWAMGIGQIDNLGTFVESTNQLHVFLHYLDKFGGLIFKFIYPIFAA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YVAYSIADRPGLVPGFIGGVFAGGLHFTFWGVKDGIPSGFLGALVLGLVAGYLTRFLNQK HHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH IKLSKNLQAMKPMFLLPGISVLVIFILNFYVVDPVFGGLNGWLSNMIASFDTGSTMMLTA HHHHCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHH VIAACTAFDLGGPVNKAAGAIAIGLAADSIFPLTGRVLAIVIPPIGLGLATVLDKFVVKR HHHHHHHHCCCCCCCHHCCCEEEEEHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH RVFDENLRVVGNTSILLGFIAVSEGAIPFMLKNPLITIPINILGAILGSCTAVALGAVQW HHHHCCCEEEECHHHHHHHHHHCCCCCCEEECCCEEEECHHHHHHHHHHHHHHHHHCCCC NPLPAIWGWPLVENLWAYILGLLVGVLFIALANIFIRFYIIKREEKRNA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9063979; 9278503; 8905232 [H]