| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is mngB [H]
Identifier: 187933668
GI number: 187933668
Start: 2222524
End: 2225127
Strand: Reverse
Name: mngB [H]
Synonym: CLL_A2125
Alternate gene names: 187933668
Gene position: 2225127-2222524 (Counterclockwise)
Preceding gene: 187932440
Following gene: 187932885
Centisome position: 58.55
GC content: 27.34
Gene sequence:
>2604_bases ATGATTAAAAAAAAGGTATATGTTGTACCACATTCTCATTGGGATAGAGAATGGTACTTTTCAATAGAGGATTCCAATGT ATTACTTAGCGAAAATATACCATATCTTATGGATGTTTTAGAAGGAGATAAAGAATTTAGTTCCTATACTTTTGATGCGC AATTATCAATAGTTGAAGAGTATTTGAAATTGTATCCAGAAGATAGGGAGAGAATAGAGAAATTAATTAAAGATAAGAGA ATCTTTGTTGGACCTTGGTATACACAAACTGATTCTTTATTGGTAAATAAAGAATCTATAGTTAGAAATTTATTATATGG GACAAGATTAGGTGACAAGTATGGAAATTCTATGAAAATAGGATATTTACCAGATATATTTGGACAAAATCAATATCTTC CTTCAATCTTAAAGGGATTTGATATAGAGGATAGTGTACTTCAAAGAGGGATTTATACAGAAGAGTTAAATGGAAACTTA AACTTTACATGGACTTCACCAGATGGAGAAAAAGTAAATGCAAATAACATTTTCTTAGGATATGGACCAGGAAAGTTTCT AGATTCTGATGATAAATATATAGAAGAAAAATTATTCCCTATGCTTGAAAAATTAGAAGGTTTAAATAAAGACTCAAATA ATATTTTACTACCAGCAGGTGGAGATCAAGTTTTAGTAAGAAAAAGATTCCCCGCTATAGTAAAAGAGCTTAATGAAAAG CAAGACAAATATGAGTTTATTCTTTCAGACTATGAAAAATTTATGAAAGATACTTGGAAAAATAAAAAGTTTGAAAATGA AATTAATGGTGAGTTAATTGCTTGCCAAAAATCAAGAATACATAACACAATAAAATCTCAAAGATATGATATTAAAAAAG GTAACTATGATGTAGAAAATAAAATTCTTTACATCCTAGAACCATTAGCAACAATAGGGAAATCTTTAGGACTTAAGTAT CCTACACCATGGATTGATACTATGTGGAAGCTTTTGTTTGATGTTCATGCACATGATAGTATTGGTGGATGTAATTCAGA TGAAACTAATAAAGAAATAATAAATAGAATTGAAAAGGTAGATAGAATTGCTTCAGATTTAATTAATATAATTAAAAAGC AAATTACTAATGCTGTTTCTAAAAAGCTTGAAAAAGATAATATAATTTTAATCTTTAATACGAAAATTAAAAATTCTAGA GAAAATGTAAAAACAGTAATATTCACAAATACTAATGCTTTTGAAGTTACAAACTTAAATGGAGAAAAAGTAGAGTTTAG CTTAATTAAAAGTGAGTACTTAAGTGGTGGAAAACAAGTAGTTGTAACAGCAGAAGGTGAAAAGGAAGTTGAACTTCCAG GTTATTATAGAAGTGAAATAGTAATTAAAAACATGGCATTACCTGCAATTGGGTATAAGACTTTATTAATTAATGAAGTG GAGAAAATGCAAGAAGATATCTTAATGGTGCAATCTTCAAATCATATTGAAAATGAAGTATTTAAAGTAGAGGTTGAAGC TGGAGTAATATCTATATTAAATAAAGCAACTGGTGAAAAATCTATAAATGCATTGTATTTTGAAGAAGATGAAGATACAG GTGATTCATATGATTTCTCGCCAACTGAAGATAGAAAAGTAAGTGTGATTAATGAATTTGAAGTTTTAGAAGTGAAGAAA TCTAAAGCAATTCAAGTAATGAAGCTACATCATAAAAAGGGTGAAAGAAAAATTAAAACTGTGATAGAACTTAGATTTGG TGAAGAATTTATTAGAGTAAATCACAAAATCAATAATACTATAGAAAATCATAGAGTAAGAATAGTTTTAAATACAGGGA TTAATAGTAAATCATCTTTAAGTGATGAAGGTTATTCATTAATAGAAAGAAATAATGAAAATAAATACATTAATACTTGG AGAGAAGAAGGGTTTGCTGAGGCACCAGTTCCAGTTTATGCTTTAGAAAATATGGTTTCTTTAAAAAAAGAAGATAGATT ATATACAGTAATGGCTAAGGGAATAAAGGAATATGAAGTGTTAGAGGATTCTAAGATTGCATTAACTTTATTTAGAAGTG TTGGTTTATTAGGAAAAGATAATCTTTTATGGAGACCAGGTAGAGCATCAGGAATTAACAATAAAGTAGTGTACACTAAA GATGCACAAATGCTTAAAGAAATGTCATTTGAATATGCCATAACATTTGGAAAAATTGAAAGTGATTTTGAAAATAAATT ATTTAATACTTTAGATAAATATTTAGATAGATATACAACCTACCAACTTCAAAAGTTAAACCTATTTGAAGAACGAGTAG AAAGATTTGAAGTTCCATTAAATCTGAAAAATGTAGATGAGGAATATTCATTATTCTCAATAGATAACAAATACGCAATT CAAAGTGTGTTAAAAGAAAGTTATGAAAAGGATGGCTTTATCTTAAGATTATTTAATCCAGGAGAAAAAGAAATCAAGGT TAATTTAACTAAAGAAAATGGAAAGAATATTTTCTTAACTAATTTGTACGAAAGAGTTTTAGAAGAAGTTAAGGATGAAT TAGTAATTAAACCAAGAGGATATATAACTATAAAGATGATTTAA
Upstream 100 bases:
>100_bases GAAAAGAGAAATGCTTAATTAATTAAAAAAATAGAGAACTAAAAGCTATTTATGATAGTTTTTAGTTCCTTCATTAATAA GATATTTCAGGAGGATTGCA
Downstream 100 bases:
>100_bases TAGGAATTTTGGAGGTAAGCTGTTATGAATAGAGTAGAGTTAATTAACTCAGTTATAGATAAAATAAAATTTATTTATGG TGAAAACTATAAAGAAGAAT
Product: glycosyl hydrolase, family 38
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 867; Mature: 867
Protein sequence:
>867_residues MIKKKVYVVPHSHWDREWYFSIEDSNVLLSENIPYLMDVLEGDKEFSSYTFDAQLSIVEEYLKLYPEDRERIEKLIKDKR IFVGPWYTQTDSLLVNKESIVRNLLYGTRLGDKYGNSMKIGYLPDIFGQNQYLPSILKGFDIEDSVLQRGIYTEELNGNL NFTWTSPDGEKVNANNIFLGYGPGKFLDSDDKYIEEKLFPMLEKLEGLNKDSNNILLPAGGDQVLVRKRFPAIVKELNEK QDKYEFILSDYEKFMKDTWKNKKFENEINGELIACQKSRIHNTIKSQRYDIKKGNYDVENKILYILEPLATIGKSLGLKY PTPWIDTMWKLLFDVHAHDSIGGCNSDETNKEIINRIEKVDRIASDLINIIKKQITNAVSKKLEKDNIILIFNTKIKNSR ENVKTVIFTNTNAFEVTNLNGEKVEFSLIKSEYLSGGKQVVVTAEGEKEVELPGYYRSEIVIKNMALPAIGYKTLLINEV EKMQEDILMVQSSNHIENEVFKVEVEAGVISILNKATGEKSINALYFEEDEDTGDSYDFSPTEDRKVSVINEFEVLEVKK SKAIQVMKLHHKKGERKIKTVIELRFGEEFIRVNHKINNTIENHRVRIVLNTGINSKSSLSDEGYSLIERNNENKYINTW REEGFAEAPVPVYALENMVSLKKEDRLYTVMAKGIKEYEVLEDSKIALTLFRSVGLLGKDNLLWRPGRASGINNKVVYTK DAQMLKEMSFEYAITFGKIESDFENKLFNTLDKYLDRYTTYQLQKLNLFEERVERFEVPLNLKNVDEEYSLFSIDNKYAI QSVLKESYEKDGFILRLFNPGEKEIKVNLTKENGKNIFLTNLYERVLEEVKDELVIKPRGYITIKMI
Sequences:
>Translated_867_residues MIKKKVYVVPHSHWDREWYFSIEDSNVLLSENIPYLMDVLEGDKEFSSYTFDAQLSIVEEYLKLYPEDRERIEKLIKDKR IFVGPWYTQTDSLLVNKESIVRNLLYGTRLGDKYGNSMKIGYLPDIFGQNQYLPSILKGFDIEDSVLQRGIYTEELNGNL NFTWTSPDGEKVNANNIFLGYGPGKFLDSDDKYIEEKLFPMLEKLEGLNKDSNNILLPAGGDQVLVRKRFPAIVKELNEK QDKYEFILSDYEKFMKDTWKNKKFENEINGELIACQKSRIHNTIKSQRYDIKKGNYDVENKILYILEPLATIGKSLGLKY PTPWIDTMWKLLFDVHAHDSIGGCNSDETNKEIINRIEKVDRIASDLINIIKKQITNAVSKKLEKDNIILIFNTKIKNSR ENVKTVIFTNTNAFEVTNLNGEKVEFSLIKSEYLSGGKQVVVTAEGEKEVELPGYYRSEIVIKNMALPAIGYKTLLINEV EKMQEDILMVQSSNHIENEVFKVEVEAGVISILNKATGEKSINALYFEEDEDTGDSYDFSPTEDRKVSVINEFEVLEVKK SKAIQVMKLHHKKGERKIKTVIELRFGEEFIRVNHKINNTIENHRVRIVLNTGINSKSSLSDEGYSLIERNNENKYINTW REEGFAEAPVPVYALENMVSLKKEDRLYTVMAKGIKEYEVLEDSKIALTLFRSVGLLGKDNLLWRPGRASGINNKVVYTK DAQMLKEMSFEYAITFGKIESDFENKLFNTLDKYLDRYTTYQLQKLNLFEERVERFEVPLNLKNVDEEYSLFSIDNKYAI QSVLKESYEKDGFILRLFNPGEKEIKVNLTKENGKNIFLTNLYERVLEEVKDELVIKPRGYITIKMI >Mature_867_residues MIKKKVYVVPHSHWDREWYFSIEDSNVLLSENIPYLMDVLEGDKEFSSYTFDAQLSIVEEYLKLYPEDRERIEKLIKDKR IFVGPWYTQTDSLLVNKESIVRNLLYGTRLGDKYGNSMKIGYLPDIFGQNQYLPSILKGFDIEDSVLQRGIYTEELNGNL NFTWTSPDGEKVNANNIFLGYGPGKFLDSDDKYIEEKLFPMLEKLEGLNKDSNNILLPAGGDQVLVRKRFPAIVKELNEK QDKYEFILSDYEKFMKDTWKNKKFENEINGELIACQKSRIHNTIKSQRYDIKKGNYDVENKILYILEPLATIGKSLGLKY PTPWIDTMWKLLFDVHAHDSIGGCNSDETNKEIINRIEKVDRIASDLINIIKKQITNAVSKKLEKDNIILIFNTKIKNSR ENVKTVIFTNTNAFEVTNLNGEKVEFSLIKSEYLSGGKQVVVTAEGEKEVELPGYYRSEIVIKNMALPAIGYKTLLINEV EKMQEDILMVQSSNHIENEVFKVEVEAGVISILNKATGEKSINALYFEEDEDTGDSYDFSPTEDRKVSVINEFEVLEVKK SKAIQVMKLHHKKGERKIKTVIELRFGEEFIRVNHKINNTIENHRVRIVLNTGINSKSSLSDEGYSLIERNNENKYINTW REEGFAEAPVPVYALENMVSLKKEDRLYTVMAKGIKEYEVLEDSKIALTLFRSVGLLGKDNLLWRPGRASGINNKVVYTK DAQMLKEMSFEYAITFGKIESDFENKLFNTLDKYLDRYTTYQLQKLNLFEERVERFEVPLNLKNVDEEYSLFSIDNKYAI QSVLKESYEKDGFILRLFNPGEKEIKVNLTKENGKNIFLTNLYERVLEEVKDELVIKPRGYITIKMI
Specific function: May hydrolyze mannosyl-D-glycerate to mannose-6- phosphate and glycerate [H]
COG id: COG0383
COG function: function code G; Alpha-mannosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 38 family [H]
Homologues:
Organism=Escherichia coli, GI1786952, Length=843, Percent_Identity=31.435349940688, Blast_Score=424, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR011330 - InterPro: IPR011682 - InterPro: IPR015341 - InterPro: IPR000602 [H]
Pfam domain/function: PF09261 Alpha-mann_mid; PF01074 Glyco_hydro_38; PF07748 Glyco_hydro_38C [H]
EC number: NA
Molecular weight: Translated: 100563; Mature: 100563
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKKVYVVPHSHWDREWYFSIEDSNVLLSENIPYLMDVLEGDKEFSSYTFDAQLSIVEE CCCCEEEEECCCCCCCEEEEEECCCCEEEECCCHHHHHHHCCCHHHCCEEEHHHHHHHHH YLKLYPEDRERIEKLIKDKRIFVGPWYTQTDSLLVNKESIVRNLLYGTRLGDKYGNSMKI HHHHCCCCHHHHHHHHHCCEEEEECCCCCCCCEEECHHHHHHHHHHHCCCCHHCCCCEEE GYLPDIFGQNQYLPSILKGFDIEDSVLQRGIYTEELNGNLNFTWTSPDGEKVNANNIFLG CCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCEEEECCCCEEEEEECCCCCEEECCEEEEE YGPGKFLDSDDKYIEEKLFPMLEKLEGLNKDSNNILLPAGGDQVLVRKRFPAIVKELNEK CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHH QDKYEFILSDYEKFMKDTWKNKKFENEINGELIACQKSRIHNTIKSQRYDIKKGNYDVEN HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCC KILYILEPLATIGKSLGLKYPTPWIDTMWKLLFDVHAHDSIGGCNSDETNKEIINRIEKV CEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH DRIASDLINIIKKQITNAVSKKLEKDNIILIFNTKIKNSRENVKTVIFTNTNAFEVTNLN HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCEEEEECCC GEKVEFSLIKSEYLSGGKQVVVTAEGEKEVELPGYYRSEIVIKNMALPAIGYKTLLINEV CCEEEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH EKMQEDILMVQSSNHIENEVFKVEVEAGVISILNKATGEKSINALYFEEDEDTGDSYDFS HHHHHHEEEEECCCCCCCCEEEEEECHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC PTEDRKVSVINEFEVLEVKKSKAIQVMKLHHKKGERKIKTVIELRFGEEFIRVNHKINNT CCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCC IENHRVRIVLNTGINSKSSLSDEGYSLIERNNENKYINTWREEGFAEAPVPVYALENMVS CCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHH LKKEDRLYTVMAKGIKEYEVLEDSKIALTLFRSVGLLGKDNLLWRPGRASGINNKVVYTK HHHCCHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEC DAQMLKEMSFEYAITFGKIESDFENKLFNTLDKYLDRYTTYQLQKLNLFEERVERFEVPL CHHHHHHCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NLKNVDEEYSLFSIDNKYAIQSVLKESYEKDGFILRLFNPGEKEIKVNLTKENGKNIFLT CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCEEEEH NLYERVLEEVKDELVIKPRGYITIKMI HHHHHHHHHHHHHEEECCCCEEEEEEC >Mature Secondary Structure MIKKKVYVVPHSHWDREWYFSIEDSNVLLSENIPYLMDVLEGDKEFSSYTFDAQLSIVEE CCCCEEEEECCCCCCCEEEEEECCCCEEEECCCHHHHHHHCCCHHHCCEEEHHHHHHHHH YLKLYPEDRERIEKLIKDKRIFVGPWYTQTDSLLVNKESIVRNLLYGTRLGDKYGNSMKI HHHHCCCCHHHHHHHHHCCEEEEECCCCCCCCEEECHHHHHHHHHHHCCCCHHCCCCEEE GYLPDIFGQNQYLPSILKGFDIEDSVLQRGIYTEELNGNLNFTWTSPDGEKVNANNIFLG CCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCEEEECCCCEEEEEECCCCCEEECCEEEEE YGPGKFLDSDDKYIEEKLFPMLEKLEGLNKDSNNILLPAGGDQVLVRKRFPAIVKELNEK CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHH QDKYEFILSDYEKFMKDTWKNKKFENEINGELIACQKSRIHNTIKSQRYDIKKGNYDVEN HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCC KILYILEPLATIGKSLGLKYPTPWIDTMWKLLFDVHAHDSIGGCNSDETNKEIINRIEKV CEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH DRIASDLINIIKKQITNAVSKKLEKDNIILIFNTKIKNSRENVKTVIFTNTNAFEVTNLN HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCEEEEECCC GEKVEFSLIKSEYLSGGKQVVVTAEGEKEVELPGYYRSEIVIKNMALPAIGYKTLLINEV CCEEEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH EKMQEDILMVQSSNHIENEVFKVEVEAGVISILNKATGEKSINALYFEEDEDTGDSYDFS HHHHHHEEEEECCCCCCCCEEEEEECHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC PTEDRKVSVINEFEVLEVKKSKAIQVMKLHHKKGERKIKTVIELRFGEEFIRVNHKINNT CCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCC IENHRVRIVLNTGINSKSSLSDEGYSLIERNNENKYINTWREEGFAEAPVPVYALENMVS CCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHH LKKEDRLYTVMAKGIKEYEVLEDSKIALTLFRSVGLLGKDNLLWRPGRASGINNKVVYTK HHHCCHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEC DAQMLKEMSFEYAITFGKIESDFENKLFNTLDKYLDRYTTYQLQKLNLFEERVERFEVPL CHHHHHHCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NLKNVDEEYSLFSIDNKYAIQSVLKESYEKDGFILRLFNPGEKEIKVNLTKENGKNIFLT CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCEEEEH NLYERVLEEVKDELVIKPRGYITIKMI HHHHHHHHHHHHHEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 9063979 [H]