Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is thrS
Identifier: 187918575
GI number: 187918575
Start: 765125
End: 766876
Strand: Direct
Name: thrS
Synonym: BH0720
Alternate gene names: 187918575
Gene position: 765125-766876 (Clockwise)
Preceding gene: 187918574
Following gene: 187918576
Centisome position: 82.96
GC content: 33.22
Gene sequence:
>1752_bases ATGAGTGAAAAATTAGATAGAGAGAGTATTCTTTATAAGAAGAGACATTCAATCGCACATGTTATGGCAGAAGCTGTGCT TGAGTTATTTCCAAATACTAAGATTGCTATAGGGCCTCCGATTAAAGATGGATTTTATTATGATTTTGATTTTGAAAAAC ATATTACAGAAGATGATCTTTTGTTAATAGAACAGAAAATGAGAGAAATACTAAAAACAGGGAGTCCTTTTGTAAAGGAA GTGATAACTAAAGAACAGGCTTTAATGCTTTTCAAAGATGAACCTTATAAAATGGATTTAATTCGCGGACTTGCGATTAC AGATGAGATTTCAATATATAAAAGTCATAATTTTACTGATCTTTGTAAAGGTCCTCATGTTGATAATATGGGTAAAATTG ATCCAAAGGCATTTAAGTTAACTAGTATTGCTGGTGCTTATTGGCGTGGCGATGAGAAAAATAAGATGCTTACTCGTATT TATGGAACTTTATGGAATAATGAAAAAGATTTAAAAGCGTACCTTAAATTACGAGAAGAGATAAAAAGGCGAGACCATAG AAAACTTGGTCGTGAACTTGATTTGTTTTCTGTTCATGAAGACATAGGGCCTGGTCTTATATTTTTTCATCCAAATGGTG CTAGAATAAGAGCTATAATAGAAGATTTTTGGAGAGAAGAGCATTTTAAAAATGGTTATGATGTACTCTTTACTCCTCAT ATTGGTAAGTCTTGTCTTTGGGAGACTTCTGGGCATTTAGATTTTTATAAAGAAAGTATGTTTGAGAAAATGGAGATGGA TAAAAGTAATTATTATGTTAAGCCTATGAATTGTCCATTTCATATTGCGATTTATAATACCGGCAAGCATTCTTATAGAG ATTTGCCGTTTAGGTGGGCTGAACTTGGTACTGTGTATCGTTATGAGAAGATTGGCGCTCTTCATGGTACTATGCGTGTT AGAGGATTTACTCAAGATGATGCACACATTATATGTGCTTATGAGCAAGTTAAGTCTGAAGTTCAAGAGGTTTTAAGATT TGCTCTTTATATGTGGAATCAATTTGGATTTGCTGATTTAAAGGCATATCTCTCGACAAAGCCAGAAAAAGCTGTAGGGG ATAAGGATGATTGGGAAATGTCTGTAAAAGTTTTAGAGGAAGCTTTGATTGATCTAAATATTGCTTATGATATTGATGAG GGAGGCGGGGCTTTTTATGGGCCTAAAATTGATCTTAAAATAATTGATTCTCTTGGGAGAGAATGGCAGATGAGCACAAT TCAATTTGATTTTAATCTTCCTGAAAGATTTAAGATGACTTATACAGCAGAGGATGGTAAAGAAAAGCGGCCTTTTATGA TTCATAGAGCCCTTCTTGGTTCTATTGAGAGATTTTTTGGAATTTTGGTAGAACATTATGGCGGAGCGTTTCCTGTGTGG TTGGCGCCTCTTCAAGTTATAATTATTCCTGTAAACAATGTTGTAGAAGAATATGCATTAGAGATATTATCTTTGTTTAA AAATGAAGGGATTAGAATAAAGCTTGATAATGATTGCAATATGAGGATGAATGCAAAAATTAGACAATATCAATCCAAAA AAGTTCCCTATATGTTTATTATAGGAGAAAAAGAGGTAGTAGAGGGAAAAATTTCGATTAGAACCAGGACAAATGATCAG ATTAATGGACTTGAACTTAAAGAAGCACTTGAATTTGTGAGACTAAAGGTAAAGAATAAGGAGATTTTATAA
Upstream 100 bases:
>100_bases TGTATATTTTATTGAGAAGATTTATTGTTTGTCTATAACTGTGATTGGAGCTTAAATTTATTATAATAATTAATATTTAG AATCTTAGTAAGGGGTTTTT
Downstream 100 bases:
>100_bases ATTGAATAGCAAGAGTATAATTAGTCCAAATAAAATAACTTTTTTTAGAATTATATTATCTTTTGTTATCTTATTTATAT TCTGTCTTGAAGATTTTTGG
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS
Number of amino acids: Translated: 583; Mature: 582
Protein sequence:
>583_residues MSEKLDRESILYKKRHSIAHVMAEAVLELFPNTKIAIGPPIKDGFYYDFDFEKHITEDDLLLIEQKMREILKTGSPFVKE VITKEQALMLFKDEPYKMDLIRGLAITDEISIYKSHNFTDLCKGPHVDNMGKIDPKAFKLTSIAGAYWRGDEKNKMLTRI YGTLWNNEKDLKAYLKLREEIKRRDHRKLGRELDLFSVHEDIGPGLIFFHPNGARIRAIIEDFWREEHFKNGYDVLFTPH IGKSCLWETSGHLDFYKESMFEKMEMDKSNYYVKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGTMRV RGFTQDDAHIICAYEQVKSEVQEVLRFALYMWNQFGFADLKAYLSTKPEKAVGDKDDWEMSVKVLEEALIDLNIAYDIDE GGGAFYGPKIDLKIIDSLGREWQMSTIQFDFNLPERFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVW LAPLQVIIIPVNNVVEEYALEILSLFKNEGIRIKLDNDCNMRMNAKIRQYQSKKVPYMFIIGEKEVVEGKISIRTRTNDQ INGLELKEALEFVRLKVKNKEIL
Sequences:
>Translated_583_residues MSEKLDRESILYKKRHSIAHVMAEAVLELFPNTKIAIGPPIKDGFYYDFDFEKHITEDDLLLIEQKMREILKTGSPFVKE VITKEQALMLFKDEPYKMDLIRGLAITDEISIYKSHNFTDLCKGPHVDNMGKIDPKAFKLTSIAGAYWRGDEKNKMLTRI YGTLWNNEKDLKAYLKLREEIKRRDHRKLGRELDLFSVHEDIGPGLIFFHPNGARIRAIIEDFWREEHFKNGYDVLFTPH IGKSCLWETSGHLDFYKESMFEKMEMDKSNYYVKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGTMRV RGFTQDDAHIICAYEQVKSEVQEVLRFALYMWNQFGFADLKAYLSTKPEKAVGDKDDWEMSVKVLEEALIDLNIAYDIDE GGGAFYGPKIDLKIIDSLGREWQMSTIQFDFNLPERFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVW LAPLQVIIIPVNNVVEEYALEILSLFKNEGIRIKLDNDCNMRMNAKIRQYQSKKVPYMFIIGEKEVVEGKISIRTRTNDQ INGLELKEALEFVRLKVKNKEIL >Mature_582_residues SEKLDRESILYKKRHSIAHVMAEAVLELFPNTKIAIGPPIKDGFYYDFDFEKHITEDDLLLIEQKMREILKTGSPFVKEV ITKEQALMLFKDEPYKMDLIRGLAITDEISIYKSHNFTDLCKGPHVDNMGKIDPKAFKLTSIAGAYWRGDEKNKMLTRIY GTLWNNEKDLKAYLKLREEIKRRDHRKLGRELDLFSVHEDIGPGLIFFHPNGARIRAIIEDFWREEHFKNGYDVLFTPHI GKSCLWETSGHLDFYKESMFEKMEMDKSNYYVKPMNCPFHIAIYNTGKHSYRDLPFRWAELGTVYRYEKIGALHGTMRVR GFTQDDAHIICAYEQVKSEVQEVLRFALYMWNQFGFADLKAYLSTKPEKAVGDKDDWEMSVKVLEEALIDLNIAYDIDEG GGAFYGPKIDLKIIDSLGREWQMSTIQFDFNLPERFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVWL APLQVIIIPVNNVVEEYALEILSLFKNEGIRIKLDNDCNMRMNAKIRQYQSKKVPYMFIIGEKEVVEGKISIRTRTNDQI NGLELKEALEFVRLKVKNKEIL
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI38570111, Length=545, Percent_Identity=41.1009174311927, Blast_Score=441, Evalue=1e-124, Organism=Homo sapiens, GI38202255, Length=558, Percent_Identity=40.6810035842294, Blast_Score=434, Evalue=1e-121, Organism=Homo sapiens, GI20070344, Length=588, Percent_Identity=35.7142857142857, Blast_Score=388, Evalue=1e-108, Organism=Escherichia coli, GI1788013, Length=571, Percent_Identity=42.7320490367776, Blast_Score=500, Evalue=1e-142, Organism=Caenorhabditis elegans, GI71984192, Length=545, Percent_Identity=40.7339449541284, Blast_Score=423, Evalue=1e-118, Organism=Caenorhabditis elegans, GI71984184, Length=545, Percent_Identity=40.7339449541284, Blast_Score=423, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6322112, Length=594, Percent_Identity=38.5521885521886, Blast_Score=407, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6322654, Length=431, Percent_Identity=35.4988399071926, Blast_Score=251, Evalue=3e-67, Organism=Drosophila melanogaster, GI24583842, Length=563, Percent_Identity=39.9644760213144, Blast_Score=439, Evalue=1e-123, Organism=Drosophila melanogaster, GI28574141, Length=563, Percent_Identity=39.9644760213144, Blast_Score=439, Evalue=1e-123, Organism=Drosophila melanogaster, GI24583839, Length=563, Percent_Identity=39.9644760213144, Blast_Score=439, Evalue=1e-123,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYT_BORHD (B2S162)
Other databases:
- EMBL: CP000048 - RefSeq: YP_001884138.1 - ProteinModelPortal: B2S162 - EnsemblBacteria: EBBORT00000006378 - GeneID: 6276606 - GenomeReviews: CP000048_GR - KEGG: bhr:BH0720 - GeneTree: EBGT00050000007426 - HOGENOM: HBG352811 - OMA: FHPKGMV - ProtClustDB: PRK12305 - BioCyc: BHER314723:BH0720-MONOMER - GO: GO:0005737 - HAMAP: MF_00184_B - InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 - Gene3D: G3DSA:3.40.50.800 - PRINTS: PR01047 - SMART: SM00863 - TIGRFAMs: TIGR00418
Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD; SSF52954 Anticodon_bd; SSF55186 Thr/Ala-tRNA-synth_IIc_edit
EC number: =6.1.1.3
Molecular weight: Translated: 68116; Mature: 67984
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKLDRESILYKKRHSIAHVMAEAVLELFPNTKIAIGPPIKDGFYYDFDFEKHITEDDL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCHHCCCCCHH LLIEQKMREILKTGSPFVKEVITKEQALMLFKDEPYKMDLIRGLAITDEISIYKSHNFTD HHHHHHHHHHHHCCCHHHHHHHCHHHEEEEECCCCCEEHHHHCEEEECCEEEEECCCCHH LCKGPHVDNMGKIDPKAFKLTSIAGAYWRGDEKNKMLTRIYGTLWNNEKDLKAYLKLREE HHCCCCCCCCCCCCCCCEEEEHHCCHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH IKRRDHRKLGRELDLFSVHEDIGPGLIFFHPNGARIRAIIEDFWREEHFKNGYDVLFTPH HHHHHHHHHCCCCCEEEEHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCC IGKSCLWETSGHLDFYKESMFEKMEMDKSNYYVKPMNCPFHIAIYNTGKHSYRDLPFRWA CCCCCEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCHHH ELGTVYRYEKIGALHGTMRVRGFTQDDAHIICAYEQVKSEVQEVLRFALYMWNQFGFADL HHCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHH KAYLSTKPEKAVGDKDDWEMSVKVLEEALIDLNIAYDIDEGGGAFYGPKIDLKIIDSLGR HHHHCCCCHHHCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCEEECCEEEHHHHHHCCC EWQMSTIQFDFNLPERFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVW CEEEEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LAPLQVIIIPVNNVVEEYALEILSLFKNEGIRIKLDNDCNMRMNAKIRQYQSKKVPYMFI HCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCHHHHHHCCCCCEEEE IGEKEVVEGKISIRTRTNDQINGLELKEALEFVRLKVKNKEIL ECCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SEKLDRESILYKKRHSIAHVMAEAVLELFPNTKIAIGPPIKDGFYYDFDFEKHITEDDL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCHHCCCCCHH LLIEQKMREILKTGSPFVKEVITKEQALMLFKDEPYKMDLIRGLAITDEISIYKSHNFTD HHHHHHHHHHHHCCCHHHHHHHCHHHEEEEECCCCCEEHHHHCEEEECCEEEEECCCCHH LCKGPHVDNMGKIDPKAFKLTSIAGAYWRGDEKNKMLTRIYGTLWNNEKDLKAYLKLREE HHCCCCCCCCCCCCCCCEEEEHHCCHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH IKRRDHRKLGRELDLFSVHEDIGPGLIFFHPNGARIRAIIEDFWREEHFKNGYDVLFTPH HHHHHHHHHCCCCCEEEEHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCC IGKSCLWETSGHLDFYKESMFEKMEMDKSNYYVKPMNCPFHIAIYNTGKHSYRDLPFRWA CCCCCEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCHHH ELGTVYRYEKIGALHGTMRVRGFTQDDAHIICAYEQVKSEVQEVLRFALYMWNQFGFADL HHCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHH KAYLSTKPEKAVGDKDDWEMSVKVLEEALIDLNIAYDIDEGGGAFYGPKIDLKIIDSLGR HHHHCCCCHHHCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCEEECCEEEHHHHHHCCC EWQMSTIQFDFNLPERFKMTYTAEDGKEKRPFMIHRALLGSIERFFGILVEHYGGAFPVW CEEEEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LAPLQVIIIPVNNVVEEYALEILSLFKNEGIRIKLDNDCNMRMNAKIRQYQSKKVPYMFI HCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCHHHHHHCCCCCEEEE IGEKEVVEGKISIRTRTNDQINGLELKEALEFVRLKVKNKEIL ECCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA