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The map label for this gene is mrdB [H]

Identifier: 187918574

GI number: 187918574

Start: 763652

End: 764971

Strand: Direct

Name: mrdB [H]

Synonym: BH0719

Alternate gene names: 187918574

Gene position: 763652-764971 (Clockwise)

Preceding gene: 187918573

Following gene: 187918575

Centisome position: 82.8

GC content: 28.56

Gene sequence:

>1320_bases
ATGGCTGTTTTTAGAAAAAGTTATGATAGTTTGGCATTATTTAGTTTGGTTATGATATCTTTTATTGGAGTTTTGCTTAT
ATATTCTAGTGATTATACTTCTAATGGCTCTCTAATGAAAATTGAATATCTCAAACAAATCGTATGGGTTCTTGGTGGAT
TTTTTGTAATTTTGATAATAGGAAGGTATGATCTTAAGATCATACATGGCGTGATCTATCCTTTATATTTTTTATTGGTT
GCATCTTTGATTTTTACTGCTATTTTTGGTGTTAGTGTTAATGGGGCTAGATCTTGGATTGGAATTTGGAAATTAGGTGG
ACAACCTTCGGAGTTTGGTAAGATTATTAGTATTCTGACTCTTGCTAAATTCTACAGTAGTAAGAATGAGTATCATAATT
TTTTTGTTTTTGTTTTTGCTTTTATGTTAATTTTTCCTATTATTTTGCTTGTGTTTTTGCAGCCCGATTTTGGTACTGCT
GTGGTTTACTTGAATATGTTTATATTTATTTCCTTTTTTGCTGGTGTAGATATACACTATATTTTGTATTTTGCTTTAAC
GGGATTCTTTTCGTTTCTTTTTGTAGTCTTGCCGGTTTGGTATGAATATAAGGCTGATATGGGAAATGTGTTATATTTGA
TTTTTTCTAATAATTTTTATTTTCAAGTAGCTTTTTTAGTATTAATTTTGGTGTTCTTATCTTCTGCTATAGGCTTTTTT
GTGTCAAAGTATAATTTAAATGTTAGAGTTATTTACTTTTATATCTCATTTATAAGTTCAATTTTATTAATTTCAGCTTT
TTTTTCTAAATTTCTATCAAAATTCATGAAACCTTACCAAATTAAAAGATTTTTGGTTTTCTTAGATCCAAATATTGATC
TTAAAGGAGCTGGATGGAATTTAAATCAGGTAAAGATTGCTATTGGTTCTGGAGGTATTTTCGGTAAGGGATTTTTAAAA
GGTCCTTATACTCATGCAAATTATGTTCCATCTCAGAGTACGGATTTTATTTTTTCAATCCTTGCTGAAGAATTTGGTTT
TGTGGGAGTTAGTGTGGTTTTAATATTATTTTTCTTTATTTTTTTTAAGATTTTAATCTTAATGAATAAAAGTAAGGATA
GATATATGTCTTTGGTGCTTGCTGGTGTACTAGGTCTTTTGTTTTTTCATACCTCTTTTAATATTGGCATGTCTTTAGGG
CTTTTGCCAATTACAGGTATTCCCCTGCCTTTTTTATCTTATGGTGGTTCTTCTACTATTACTTTCTTTTTTGCTATGGC
TCTTTATTTTAATATTGAATCTATAGTAACTATGGATTAA

Upstream 100 bases:

>100_bases
CTGCTAAATCCGTAGATTTAATGATGCAAGGGATTTTTACTAATCAGAGTTATGAGGATATTCTTAGAGAATATAGACCA
TGGTATATTAGGTAAGGTAA

Downstream 100 bases:

>100_bases
AAATTTTATTTGTTGGTTCTTATTGTTTTGCCTGTTTTTTTAGTAAATTTTTTTGTATATTTTATTGAGAAGATTTATTG
TTTGTCTATAACTGTGATTG

Product: rod shape-determining protein RodA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MAVFRKSYDSLALFSLVMISFIGVLLIYSSDYTSNGSLMKIEYLKQIVWVLGGFFVILIIGRYDLKIIHGVIYPLYFLLV
ASLIFTAIFGVSVNGARSWIGIWKLGGQPSEFGKIISILTLAKFYSSKNEYHNFFVFVFAFMLIFPIILLVFLQPDFGTA
VVYLNMFIFISFFAGVDIHYILYFALTGFFSFLFVVLPVWYEYKADMGNVLYLIFSNNFYFQVAFLVLILVFLSSAIGFF
VSKYNLNVRVIYFYISFISSILLISAFFSKFLSKFMKPYQIKRFLVFLDPNIDLKGAGWNLNQVKIAIGSGGIFGKGFLK
GPYTHANYVPSQSTDFIFSILAEEFGFVGVSVVLILFFFIFFKILILMNKSKDRYMSLVLAGVLGLLFFHTSFNIGMSLG
LLPITGIPLPFLSYGGSSTITFFFAMALYFNIESIVTMD

Sequences:

>Translated_439_residues
MAVFRKSYDSLALFSLVMISFIGVLLIYSSDYTSNGSLMKIEYLKQIVWVLGGFFVILIIGRYDLKIIHGVIYPLYFLLV
ASLIFTAIFGVSVNGARSWIGIWKLGGQPSEFGKIISILTLAKFYSSKNEYHNFFVFVFAFMLIFPIILLVFLQPDFGTA
VVYLNMFIFISFFAGVDIHYILYFALTGFFSFLFVVLPVWYEYKADMGNVLYLIFSNNFYFQVAFLVLILVFLSSAIGFF
VSKYNLNVRVIYFYISFISSILLISAFFSKFLSKFMKPYQIKRFLVFLDPNIDLKGAGWNLNQVKIAIGSGGIFGKGFLK
GPYTHANYVPSQSTDFIFSILAEEFGFVGVSVVLILFFFIFFKILILMNKSKDRYMSLVLAGVLGLLFFHTSFNIGMSLG
LLPITGIPLPFLSYGGSSTITFFFAMALYFNIESIVTMD
>Mature_438_residues
AVFRKSYDSLALFSLVMISFIGVLLIYSSDYTSNGSLMKIEYLKQIVWVLGGFFVILIIGRYDLKIIHGVIYPLYFLLVA
SLIFTAIFGVSVNGARSWIGIWKLGGQPSEFGKIISILTLAKFYSSKNEYHNFFVFVFAFMLIFPIILLVFLQPDFGTAV
VYLNMFIFISFFAGVDIHYILYFALTGFFSFLFVVLPVWYEYKADMGNVLYLIFSNNFYFQVAFLVLILVFLSSAIGFFV
SKYNLNVRVIYFYISFISSILLISAFFSKFLSKFMKPYQIKRFLVFLDPNIDLKGAGWNLNQVKIAIGSGGIFGKGFLKG
PYTHANYVPSQSTDFIFSILAEEFGFVGVSVVLILFFFIFFKILILMNKSKDRYMSLVLAGVLGLLFFHTSFNIGMSLGL
LPITGIPLPFLSYGGSSTITFFFAMALYFNIESIVTMD

Specific function: This is one of the proteins responsible for the rod shape of the cell [H]

COG id: COG0772

COG function: function code D; Bacterial cell division membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ftsW/rodA/spoVE family [H]

Homologues:

Organism=Escherichia coli, GI1786853, Length=175, Percent_Identity=37.1428571428571, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1786277, Length=160, Percent_Identity=36.875, Blast_Score=105, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001182
- InterPro:   IPR018365
- InterPro:   IPR011923 [H]

Pfam domain/function: PF01098 FTSW_RODA_SPOVE [H]

EC number: NA

Molecular weight: Translated: 49873; Mature: 49742

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00428 FTSW_RODA_SPOVE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVFRKSYDSLALFSLVMISFIGVLLIYSSDYTSNGSLMKIEYLKQIVWVLGGFFVILII
CCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
GRYDLKIIHGVIYPLYFLLVASLIFTAIFGVSVNGARSWIGIWKLGGQPSEFGKIISILT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEECCCCCHHHHHHHHHHH
LAKFYSSKNEYHNFFVFVFAFMLIFPIILLVFLQPDFGTAVVYLNMFIFISFFAGVDIHY
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHH
ILYFALTGFFSFLFVVLPVWYEYKADMGNVLYLIFSNNFYFQVAFLVLILVFLSSAIGFF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
VSKYNLNVRVIYFYISFISSILLISAFFSKFLSKFMKPYQIKRFLVFLDPNIDLKGAGWN
HHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEEECCCCEEECCCCC
LNQVKIAIGSGGIFGKGFLKGPYTHANYVPSQSTDFIFSILAEEFGFVGVSVVLILFFFI
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
FFKILILMNKSKDRYMSLVLAGVLGLLFFHTSFNIGMSLGLLPITGIPLPFLSYGGSSTI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEECCCCCHHHHCCCCHHH
TFFFAMALYFNIESIVTMD
HHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
AVFRKSYDSLALFSLVMISFIGVLLIYSSDYTSNGSLMKIEYLKQIVWVLGGFFVILII
CCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
GRYDLKIIHGVIYPLYFLLVASLIFTAIFGVSVNGARSWIGIWKLGGQPSEFGKIISILT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEECCCCCHHHHHHHHHHH
LAKFYSSKNEYHNFFVFVFAFMLIFPIILLVFLQPDFGTAVVYLNMFIFISFFAGVDIHY
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHH
ILYFALTGFFSFLFVVLPVWYEYKADMGNVLYLIFSNNFYFQVAFLVLILVFLSSAIGFF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
VSKYNLNVRVIYFYISFISSILLISAFFSKFLSKFMKPYQIKRFLVFLDPNIDLKGAGWN
HHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEEECCCCEEECCCCC
LNQVKIAIGSGGIFGKGFLKGPYTHANYVPSQSTDFIFSILAEEFGFVGVSVVLILFFFI
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
FFKILILMNKSKDRYMSLVLAGVLGLLFFHTSFNIGMSLGLLPITGIPLPFLSYGGSSTI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEECCCCCHHHHCCCCHHH
TFFFAMALYFNIESIVTMD
HHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]