Definition | Borrelia hermsii DAH chromosome, complete genome. |
---|---|
Accession | NC_010673 |
Length | 922,307 |
Click here to switch to the map view.
The map label for this gene is 187918568
Identifier: 187918568
GI number: 187918568
Start: 757337
End: 758095
Strand: Direct
Name: 187918568
Synonym: BH0713
Alternate gene names: NA
Gene position: 757337-758095 (Clockwise)
Preceding gene: 187918567
Following gene: 187918569
Centisome position: 82.11
GC content: 31.62
Gene sequence:
>759_bases ATGGAAAGTAATATCGATATATTGAAGAATCTTGAATGTATATATAAAGCTAAATTTGAGCTTGAGGAAAGGCAAAAAAA TATTCCTAAATATTTGCAAACAAAGAAGGCTCAAATTGATGGACTTATTGAGACTCTTGCTGAATTACAGTTCAAGTTTA AAGAGTATCAAAAAGAAGATTCATCTTTAAAATTAGATATTCAAGACATTAATGTGAGGAAGAGTAAGGCAGAAGAGAAA ATTGATAGTATTAAAACTCAAAGGGAATATGAGGCTCTTGAGAAGGAATTGCAGACTATTATCGATGATGAGGTTGCTAT TAGAAAGAAAATGACGCATATTACTGGACTTAAGACAAAAGTAGATAGGGAAATAGCAGATATTAAGAGTAAGCTTGAGA TTGAGCAGGATATTTATGCTACTGAGAGTAGTGCTCTTGAAAATGAGCTTTTAGAAATTGTAAAAAAGCTTGATTCTATA CGAAGTGAAGAGGAAAAATATGCTTCTCGAATGGACGAGGATTTTTTGTTTAAATTTCAAAGAATTATTAGAAATAAATC TAATGGGGTTGTACCTTTGATTGAAAATGTTTGCAAGGGTTGTCATATGATACTTCCTGTTGAGTTTGCAAATAAGGTAA GGCGTGAACCGGATGATATTAAATTTTGTCCTTATTGTAGTAGAATACTCTATTATCAAGATAGATTTGAAGTTGGTTTA GAAATGGTTCCTGGTGGTTTGGCAGATCTGATAGAATAA
Upstream 100 bases:
>100_bases TAGACAGATTGAATCTAAGGCTTTAAGGCGACTTAAAAATCCTAAGAAAACTCAAAAACTTAAAGATTATTTAGAAGATT TAAATTGAATAGGAGGCTTC
Downstream 100 bases:
>100_bases GGGGTTTTTATATTTAAGTTGATATCCAGTCATCGCTTAATATGCTGCATTGAAGTATTTTAAGAGGAAAGTCCGAGCTC CAATAAGAGTATAATGCTAG
Product: Zn-ribbon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MESNIDILKNLECIYKAKFELEERQKNIPKYLQTKKAQIDGLIETLAELQFKFKEYQKEDSSLKLDIQDINVRKSKAEEK IDSIKTQREYEALEKELQTIIDDEVAIRKKMTHITGLKTKVDREIADIKSKLEIEQDIYATESSALENELLEIVKKLDSI RSEEEKYASRMDEDFLFKFQRIIRNKSNGVVPLIENVCKGCHMILPVEFANKVRREPDDIKFCPYCSRILYYQDRFEVGL EMVPGGLADLIE
Sequences:
>Translated_252_residues MESNIDILKNLECIYKAKFELEERQKNIPKYLQTKKAQIDGLIETLAELQFKFKEYQKEDSSLKLDIQDINVRKSKAEEK IDSIKTQREYEALEKELQTIIDDEVAIRKKMTHITGLKTKVDREIADIKSKLEIEQDIYATESSALENELLEIVKKLDSI RSEEEKYASRMDEDFLFKFQRIIRNKSNGVVPLIENVCKGCHMILPVEFANKVRREPDDIKFCPYCSRILYYQDRFEVGL EMVPGGLADLIE >Mature_252_residues MESNIDILKNLECIYKAKFELEERQKNIPKYLQTKKAQIDGLIETLAELQFKFKEYQKEDSSLKLDIQDINVRKSKAEEK IDSIKTQREYEALEKELQTIIDDEVAIRKKMTHITGLKTKVDREIADIKSKLEIEQDIYATESSALENELLEIVKKLDSI RSEEEKYASRMDEDFLFKFQRIIRNKSNGVVPLIENVCKGCHMILPVEFANKVRREPDDIKFCPYCSRILYYQDRFEVGL EMVPGGLADLIE
Specific function: Unknown
COG id: COG1579
COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29539; Mature: 29539
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESNIDILKNLECIYKAKFELEERQKNIPKYLQTKKAQIDGLIETLAELQFKFKEYQKED CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSLKLDIQDINVRKSKAEEKIDSIKTQREYEALEKELQTIIDDEVAIRKKMTHITGLKTK CCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDREIADIKSKLEIEQDIYATESSALENELLEIVKKLDSIRSEEEKYASRMDEDFLFKFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RIIRNKSNGVVPLIENVCKGCHMILPVEFANKVRREPDDIKFCPYCSRILYYQDRFEVGL HHHHCCCCCCCHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH EMVPGGLADLIE HHCCCCHHHHCC >Mature Secondary Structure MESNIDILKNLECIYKAKFELEERQKNIPKYLQTKKAQIDGLIETLAELQFKFKEYQKED CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSLKLDIQDINVRKSKAEEKIDSIKTQREYEALEKELQTIIDDEVAIRKKMTHITGLKTK CCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDREIADIKSKLEIEQDIYATESSALENELLEIVKKLDSIRSEEEKYASRMDEDFLFKFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RIIRNKSNGVVPLIENVCKGCHMILPVEFANKVRREPDDIKFCPYCSRILYYQDRFEVGL HHHHCCCCCCCHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH EMVPGGLADLIE HHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA