Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918546
Identifier: 187918546
GI number: 187918546
Start: 737405
End: 737938
Strand: Direct
Name: 187918546
Synonym: BH0690
Alternate gene names: NA
Gene position: 737405-737938 (Clockwise)
Preceding gene: 187918544
Following gene: 187918547
Centisome position: 79.95
GC content: 28.65
Gene sequence:
>534_bases ATGTCAAATCATTTAAGTTATTTAAAGAAGGATGATTTAGATAAAATAAATTTAAAACTTCAAGAATTGTTAGCAGGACT TCATGTTTTTTATGCTAATTTGAGAGGTATCCATTGGAACATAAAGGATATTAATTTTTTTGTGATTCATAAAAAAACTG AGAAACTTTATGATTATGTTGCAGAGGTGATCGATATTATAGCTGAGAGGTCTAGAGCGCTTGGATATGATTCTGAGTTT AGATGTTCTGAATTTATTAAGAAATCATTTATTAATGAGATTAGTTTAGATGAAACTTCAAGTCTTATGCCTTCAATTAG TAGTATTGTTTCTAATCTTAAAGATATTCTTAAAAATATATCTGATACAAGATGTTTTATTGATGGTACATCTGATTATG GGACAGCTAATGTTTTAGATGATATTATTGTTTCTTTTGAAAAGTATTTATGGATGTACAGTTCTTTGTTAGGTGGTTGC GGGTGTGCATTATTGCATAAGATGGAGCATTGTGAGAAAGGTTACGTTAGTTGA
Upstream 100 bases:
>100_bases AAAATAATGCAAATAAATTTTTTTTGCATAGTGAGCCTACTTATACTAAAATAATGTTATTATAACATATATCTAGTTAT TTTTTAAATAGGAGCGTAAT
Downstream 100 bases:
>100_bases TCTTATGATATGATATAAAAATAATTTTAATATTTTTTTGTATGCATTAATTAAGTATAATTATGATCTAATTGAAAAAA GCTATAGCAGAATCTATAGC
Product: neutrophil-activating protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSNHLSYLKKDDLDKINLKLQELLAGLHVFYANLRGIHWNIKDINFFVIHKKTEKLYDYVAEVIDIIAERSRALGYDSEF RCSEFIKKSFINEISLDETSSLMPSISSIVSNLKDILKNISDTRCFIDGTSDYGTANVLDDIIVSFEKYLWMYSSLLGGC GCALLHKMEHCEKGYVS
Sequences:
>Translated_177_residues MSNHLSYLKKDDLDKINLKLQELLAGLHVFYANLRGIHWNIKDINFFVIHKKTEKLYDYVAEVIDIIAERSRALGYDSEF RCSEFIKKSFINEISLDETSSLMPSISSIVSNLKDILKNISDTRCFIDGTSDYGTANVLDDIIVSFEKYLWMYSSLLGGC GCALLHKMEHCEKGYVS >Mature_176_residues SNHLSYLKKDDLDKINLKLQELLAGLHVFYANLRGIHWNIKDINFFVIHKKTEKLYDYVAEVIDIIAERSRALGYDSEFR CSEFIKKSFINEISLDETSSLMPSISSIVSNLKDILKNISDTRCFIDGTSDYGTANVLDDIIVSFEKYLWMYSSLLGGCG CALLHKMEHCEKGYVS
Specific function: Unknown
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dps family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002177 - InterPro: IPR023188 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 20265; Mature: 20133
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHLSYLKKDDLDKINLKLQELLAGLHVFYANLRGIHWNIKDINFFVIHKKTEKLYDYV CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECHHHHHHHHH AEVIDIIAERSRALGYDSEFRCSEFIKKSFINEISLDETSSLMPSISSIVSNLKDILKNI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC SDTRCFIDGTSDYGTANVLDDIIVSFEKYLWMYSSLLGGCGCALLHKMEHCEKGYVS CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SNHLSYLKKDDLDKINLKLQELLAGLHVFYANLRGIHWNIKDINFFVIHKKTEKLYDYV CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECHHHHHHHHH AEVIDIIAERSRALGYDSEFRCSEFIKKSFINEISLDETSSLMPSISSIVSNLKDILKNI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC SDTRCFIDGTSDYGTANVLDDIIVSFEKYLWMYSSLLGGCGCALLHKMEHCEKGYVS CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]