Definition | Borrelia hermsii DAH chromosome, complete genome. |
---|---|
Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is cheW [H]
Identifier: 187918526
GI number: 187918526
Start: 715404
End: 716783
Strand: Direct
Name: cheW [H]
Synonym: BH0670
Alternate gene names: 187918526
Gene position: 715404-716783 (Clockwise)
Preceding gene: 187918525
Following gene: 187918527
Centisome position: 77.57
GC content: 28.26
Gene sequence:
>1380_bases ATGATGGAAATAAAAGAGATATATTCAGGTGAGCATAATTTAAGTAGACAGGTTAAAGGAATTAACCCTGTTAATTTGGA TTTTAAAGTAGTATCTTTCAATATTGGTAATGATAATTATTTAATAGATATTATGCAAGTTAAGGAAATTAGGAAATCTA GTAATTTTACATATGTCCCAAATGCTAAGGAATATGTGGTTGGTCTTGATAATTTAAGAGGTGAGATAATCTCCATTATT GATTTGAGAATAATGTTTAATTTGGAAGTCATTAAGAAAGAGCTTGAAGATATTATGGTTCTAAGGAATGACGATTTATT AATAGGGGTTATTGTTGATAAGGTTAATAATGTTTTTTCAATTGATTCTTCTCTGATCCAGGAGCCCCATCCTGTTCTAT CTCATGGAGCACTTATACGCTACATAAAAGGAGTAGTTGAATATAGTGGAAAATTATATATTCTTCTTGATGTTGATAGG ATTTTTAATTATGATAGAGAAGAAGAGCTTTTATTGGAAGAGATCAGCAATGATGATGAGGTAAATACTGCTGATTCTGA GTCATTGTCTTATAGTAATAATTCCTTAGAATTACCAGAATCATCTGTTAGTGAGATTGTAACATCACCTAAGGATGATT TGGTTGATTTAAAGGTTATTAAAAAAAATCTTTTTAAATATTCTTTCAATGCGTCTTTAGTAAGTGACGAGTTTTTAAAG AAAGTTAGTATGAAATTAGATATTGCAAATATTAATGATTTATCTTATGATAACTTTTTAGGTGAATTTTATTCAAAATC ATCAGGATGTTTATGGAGTGATAAATATTTAAAAGGATTTCAAGATGAAATTGTTAAACAACATGTTAATGATATGAGTG ATGTTGGTACCGTTTTAAATGTTTTTGAAATTGGATGTGGTGAAGGAAAAGAGACAATATCTTATGTGAGTGTTTTATAT GAGTCTTATAAAAATCCTTTTAAGGTAACAGCTATTGATAATGATTTAATTAAGGTGATTGGCACTTCTAATTTAGTTTT CTCAGAATCTGAGATCAATTTGAGCGAGATTTATAAAAAAAATTCTTTTGAGCAGAGTCCGGGAGTTTATAAATTCAAGC CAGAGATTATTAATAGTGTTTTATTTGAATATTCAGATGCTATTTTATCAGAATTTCCAGAGAATTTGGGAATTATTTTT TTAAGAGATGTTTTGTGTTTCTTGAGTGATGATGGGCAAGTTTTAATTCTGGATGCAATTGCAGAAAAATCTGTTAGGGG TGCTCTTTTGATTTTGGGAGATAATGAAGAACTTAAGAATAATGATCTTTTTGTAAAAGATATATCTGTGAAATATTTTA ACTTGTATAAAAGGATCTAA
Upstream 100 bases:
>100_bases CCCGGAATAGTTGGAGCTACTACACTTGGTAATGGTAAGGTTGTCTTAATTATTGATGTATTTAGGCTTTTTGACCTAAA GGATATGAAAGGATAGTCTT
Downstream 100 bases:
>100_bases AGGAGAAATTAATGAGAATAGATTATATAGAGCCGTTTTTAGATGCTGCTTCTTCAGTTTTAAGGGATATGTTGCTTGTT GAAGATATTCAAATGGGCAG
Product: chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MMEIKEIYSGEHNLSRQVKGINPVNLDFKVVSFNIGNDNYLIDIMQVKEIRKSSNFTYVPNAKEYVVGLDNLRGEIISII DLRIMFNLEVIKKELEDIMVLRNDDLLIGVIVDKVNNVFSIDSSLIQEPHPVLSHGALIRYIKGVVEYSGKLYILLDVDR IFNYDREEELLLEEISNDDEVNTADSESLSYSNNSLELPESSVSEIVTSPKDDLVDLKVIKKNLFKYSFNASLVSDEFLK KVSMKLDIANINDLSYDNFLGEFYSKSSGCLWSDKYLKGFQDEIVKQHVNDMSDVGTVLNVFEIGCGEGKETISYVSVLY ESYKNPFKVTAIDNDLIKVIGTSNLVFSESEINLSEIYKKNSFEQSPGVYKFKPEIINSVLFEYSDAILSEFPENLGIIF LRDVLCFLSDDGQVLILDAIAEKSVRGALLILGDNEELKNNDLFVKDISVKYFNLYKRI
Sequences:
>Translated_459_residues MMEIKEIYSGEHNLSRQVKGINPVNLDFKVVSFNIGNDNYLIDIMQVKEIRKSSNFTYVPNAKEYVVGLDNLRGEIISII DLRIMFNLEVIKKELEDIMVLRNDDLLIGVIVDKVNNVFSIDSSLIQEPHPVLSHGALIRYIKGVVEYSGKLYILLDVDR IFNYDREEELLLEEISNDDEVNTADSESLSYSNNSLELPESSVSEIVTSPKDDLVDLKVIKKNLFKYSFNASLVSDEFLK KVSMKLDIANINDLSYDNFLGEFYSKSSGCLWSDKYLKGFQDEIVKQHVNDMSDVGTVLNVFEIGCGEGKETISYVSVLY ESYKNPFKVTAIDNDLIKVIGTSNLVFSESEINLSEIYKKNSFEQSPGVYKFKPEIINSVLFEYSDAILSEFPENLGIIF LRDVLCFLSDDGQVLILDAIAEKSVRGALLILGDNEELKNNDLFVKDISVKYFNLYKRI >Mature_459_residues MMEIKEIYSGEHNLSRQVKGINPVNLDFKVVSFNIGNDNYLIDIMQVKEIRKSSNFTYVPNAKEYVVGLDNLRGEIISII DLRIMFNLEVIKKELEDIMVLRNDDLLIGVIVDKVNNVFSIDSSLIQEPHPVLSHGALIRYIKGVVEYSGKLYILLDVDR IFNYDREEELLLEEISNDDEVNTADSESLSYSNNSLELPESSVSEIVTSPKDDLVDLKVIKKNLFKYSFNASLVSDEFLK KVSMKLDIANINDLSYDNFLGEFYSKSSGCLWSDKYLKGFQDEIVKQHVNDMSDVGTVLNVFEIGCGEGKETISYVSVLY ESYKNPFKVTAIDNDLIKVIGTSNLVFSESEINLSEIYKKNSFEQSPGVYKFKPEIINSVLFEYSDAILSEFPENLGIIF LRDVLCFLSDDGQVLILDAIAEKSVRGALLILGDNEELKNNDLFVKDISVKYFNLYKRI
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=171, Percent_Identity=29.2397660818713, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 52214; Mature: 52214
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS50851 CHEW ; PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEIKEIYSGEHNLSRQVKGINPVNLDFKVVSFNIGNDNYLIDIMQVKEIRKSSNFTYVP CCCHHHHHCCCCCHHHHHCCCCCCCEEEEEEEEEECCCCEEEEHHHHHHHHHCCCEEECC NAKEYVVGLDNLRGEIISIIDLRIMFNLEVIKKELEDIMVLRNDDLLIGVIVDKVNNVFS CCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEHHCCCCEE IDSSLIQEPHPVLSHGALIRYIKGVVEYSGKLYILLDVDRIFNYDREEELLLEEISNDDE CCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCHHHHHHHHCCCCCC VNTADSESLSYSNNSLELPESSVSEIVTSPKDDLVDLKVIKKNLFKYSFNASLVSDEFLK CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHH KVSMKLDIANINDLSYDNFLGEFYSKSSGCLWSDKYLKGFQDEIVKQHVNDMSDVGTVLN HHHHEEEEECCCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH VFEIGCGEGKETISYVSVLYESYKNPFKVTAIDNDLIKVIGTSNLVFSESEINLSEIYKK HHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCEEEECCCCCHHHHHHC NSFEQSPGVYKFKPEIINSVLFEYSDAILSEFPENLGIIFLRDVLCFLSDDGQVLILDAI CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEH AEKSVRGALLILGDNEELKNNDLFVKDISVKYFNLYKRI HCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHCC >Mature Secondary Structure MMEIKEIYSGEHNLSRQVKGINPVNLDFKVVSFNIGNDNYLIDIMQVKEIRKSSNFTYVP CCCHHHHHCCCCCHHHHHCCCCCCCEEEEEEEEEECCCCEEEEHHHHHHHHHCCCEEECC NAKEYVVGLDNLRGEIISIIDLRIMFNLEVIKKELEDIMVLRNDDLLIGVIVDKVNNVFS CCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEHHCCCCEE IDSSLIQEPHPVLSHGALIRYIKGVVEYSGKLYILLDVDRIFNYDREEELLLEEISNDDE CCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCHHHHHHHHCCCCCC VNTADSESLSYSNNSLELPESSVSEIVTSPKDDLVDLKVIKKNLFKYSFNASLVSDEFLK CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHH KVSMKLDIANINDLSYDNFLGEFYSKSSGCLWSDKYLKGFQDEIVKQHVNDMSDVGTVLN HHHHEEEEECCCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH VFEIGCGEGKETISYVSVLYESYKNPFKVTAIDNDLIKVIGTSNLVFSESEINLSEIYKK HHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCEEEECCCCCHHHHHHC NSFEQSPGVYKFKPEIINSVLFEYSDAILSEFPENLGIIFLRDVLCFLSDDGQVLILDAI CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEH AEKSVRGALLILGDNEELKNNDLFVKDISVKYFNLYKRI HCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]