Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is flaA [H]
Identifier: 187918524
GI number: 187918524
Start: 711720
End: 712754
Strand: Direct
Name: flaA [H]
Synonym: BH0668
Alternate gene names: 187918524
Gene position: 711720-712754 (Clockwise)
Preceding gene: 187918523
Following gene: 187918525
Centisome position: 77.17
GC content: 35.94
Gene sequence:
>1035_bases ATGACTAAAGCAAGAAACATTGTTTTTATTTTATTTTTTCTTATTATCTTAAGTCCTCTTTTCGGACAAGAAGCAATTGG TGCAGGTGCTAATTCCCCTAAGGATGAGCCTGGCGAAGTAGTTTTTGATTTTGTTGAACTTGCAAGAGATCCAAGTTCAA CAAGGCTTGATCTTGCAGATTATGTTGATCGTGTGTATTCCGGAGCTTCAAGTGTTGTGAAAGCAGAAGATATGGTATTA GACCTTGGAATAAGTAATTGGACTGTTCTTCTAGCTCCTTCAGCTAGGATGCAGGCTTATGTAAAAAATTCTGTTGTTGT TCCAGCTGTTGTTAAGGCTGAATCTAAAAGATATGCAGGCGATACAATCTTAGGAGTGAGAATATTATTCCCAAGTTATT CTCAATCTTCTGCAATGGTTTTGCCTCCATTTAAGATCCCGTTTTATGCTGGGGAGGATGGTAAGCAGTTTTTAGGTAAA GGTCTTATTGATAATATTAAAATTATGAAAGAAGTTAAGGTTACTGTTTACAGTTTGGGTCATGAGGTCGATCTTGAAGT TTTATTTGAAGATATGAGTGGTATGGAATATGTATATCCTTTAGGTACCTTGAAATTTAAAGGTTGGGCAGATTTAGTGT GGTCAAATCCTAATTATATTCCAGGTATGAGCGCTAGAGTGGTTAAGGATAACATTCCTAATTATCCCCTTCCCTCAAGT AAGATGAGATTTAAGGCATTTAGGGTTTTAAAATCTCATAGCTCAAGGGATCAGAATTTGATTTTTTATGTTAAGGATGT AAGAGTTATTTATAGTAAGTTAAGTGTTTCCTTGGATTCTGATATTGATAATGAATCTGTATTTAAGATTTATGAGACAC GTGGGGCAGAATCACTTCGACGATTGAAATCACAGGAAGCTCTTAAGAGAGTTTTAAAGATTAGAGAAAGTGTGTCAATG CCAGGTGAGTCTTTCCAAAGTTTCTTAGAGAAAGGCGGCAATGATGAATCTGGGGCACGAACTGAAAAACAATAA
Upstream 100 bases:
>100_bases GGGGTATATTTTAGATGTTTAAGGCATTTGAGGTAGTCTTGGATATACTGTAAAATTAAAATTAGCAGTTTAAATGATTT TGTAGCAGGAGTTAATTTTT
Downstream 100 bases:
>100_bases ATTTAATGATGTGTTAATAGGGTTTAAATCTTTAAGATTTTGCCCTATTAAGCTAAAATAGGAAAGATAGGCTAATGCTA GATTCAGATAGTAAAGAGCT
Product: flagellar filament outer layer protein
Products: NA
Alternate protein names: Sheath protein [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTKARNIVFILFFLIILSPLFGQEAIGAGANSPKDEPGEVVFDFVELARDPSSTRLDLADYVDRVYSGASSVVKAEDMVL DLGISNWTVLLAPSARMQAYVKNSVVVPAVVKAESKRYAGDTILGVRILFPSYSQSSAMVLPPFKIPFYAGEDGKQFLGK GLIDNIKIMKEVKVTVYSLGHEVDLEVLFEDMSGMEYVYPLGTLKFKGWADLVWSNPNYIPGMSARVVKDNIPNYPLPSS KMRFKAFRVLKSHSSRDQNLIFYVKDVRVIYSKLSVSLDSDIDNESVFKIYETRGAESLRRLKSQEALKRVLKIRESVSM PGESFQSFLEKGGNDESGARTEKQ
Sequences:
>Translated_344_residues MTKARNIVFILFFLIILSPLFGQEAIGAGANSPKDEPGEVVFDFVELARDPSSTRLDLADYVDRVYSGASSVVKAEDMVL DLGISNWTVLLAPSARMQAYVKNSVVVPAVVKAESKRYAGDTILGVRILFPSYSQSSAMVLPPFKIPFYAGEDGKQFLGK GLIDNIKIMKEVKVTVYSLGHEVDLEVLFEDMSGMEYVYPLGTLKFKGWADLVWSNPNYIPGMSARVVKDNIPNYPLPSS KMRFKAFRVLKSHSSRDQNLIFYVKDVRVIYSKLSVSLDSDIDNESVFKIYETRGAESLRRLKSQEALKRVLKIRESVSM PGESFQSFLEKGGNDESGARTEKQ >Mature_343_residues TKARNIVFILFFLIILSPLFGQEAIGAGANSPKDEPGEVVFDFVELARDPSSTRLDLADYVDRVYSGASSVVKAEDMVLD LGISNWTVLLAPSARMQAYVKNSVVVPAVVKAESKRYAGDTILGVRILFPSYSQSSAMVLPPFKIPFYAGEDGKQFLGKG LIDNIKIMKEVKVTVYSLGHEVDLEVLFEDMSGMEYVYPLGTLKFKGWADLVWSNPNYIPGMSARVVKDNIPNYPLPSSK MRFKAFRVLKSHSSRDQNLIFYVKDVRVIYSKLSVSLDSDIDNESVFKIYETRGAESLRRLKSQEALKRVLKIRESVSMP GESFQSFLEKGGNDESGARTEKQ
Specific function: Component of the outer layer of the flagella [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic flagellum. Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006714 - InterPro: IPR016369 [H]
Pfam domain/function: PF04620 FlaA [H]
EC number: NA
Molecular weight: Translated: 38418; Mature: 38286
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKARNIVFILFFLIILSPLFGQEAIGAGANSPKDEPGEVVFDFVELARDPSSTRLDLAD CCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHH YVDRVYSGASSVVKAEDMVLDLGISNWTVLLAPSARMQAYVKNSVVVPAVVKAESKRYAG HHHHHHCCHHHHHHHHHEEEEECCCCEEEEECCCHHHHHHHHCCEEEHHHHHHCCCCCCC DTILGVRILFPSYSQSSAMVLPPFKIPFYAGEDGKQFLGKGLIDNIKIMKEVKVTVYSLG CEEEEEEEEECCCCCCCEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC HEVDLEVLFEDMSGMEYVYPLGTLKFKGWADLVWSNPNYIPGMSARVVKDNIPNYPLPSS CCCCHHHHHHHHCCCEEEEECCCEEECCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCC KMRFKAFRVLKSHSSRDQNLIFYVKDVRVIYSKLSVSLDSDIDNESVFKIYETRGAESLR HHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCHHHHH RLKSQEALKRVLKIRESVSMPGESFQSFLEKGGNDESGARTEKQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TKARNIVFILFFLIILSPLFGQEAIGAGANSPKDEPGEVVFDFVELARDPSSTRLDLAD CCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHH YVDRVYSGASSVVKAEDMVLDLGISNWTVLLAPSARMQAYVKNSVVVPAVVKAESKRYAG HHHHHHCCHHHHHHHHHEEEEECCCCEEEEECCCHHHHHHHHCCEEEHHHHHHCCCCCCC DTILGVRILFPSYSQSSAMVLPPFKIPFYAGEDGKQFLGKGLIDNIKIMKEVKVTVYSLG CEEEEEEEEECCCCCCCEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC HEVDLEVLFEDMSGMEYVYPLGTLKFKGWADLVWSNPNYIPGMSARVVKDNIPNYPLPSS CCCCHHHHHHHHCCCEEEEECCCEEECCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCC KMRFKAFRVLKSHSSRDQNLIFYVKDVRVIYSKLSVSLDSDIDNESVFKIYETRGAESLR HHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCHHHHH RLKSQEALKRVLKIRESVSMPGESFQSFLEKGGNDESGARTEKQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8990312; 9403685; 9765799 [H]