Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918486
Identifier: 187918486
GI number: 187918486
Start: 665863
End: 666588
Strand: Direct
Name: 187918486
Synonym: BH0628
Alternate gene names: NA
Gene position: 665863-666588 (Clockwise)
Preceding gene: 187918484
Following gene: 187918488
Centisome position: 72.2
GC content: 30.03
Gene sequence:
>726_bases ATGGATAAATTTTATAAATTTATGCTTGTGCCTTTAATATTTATTGCTTGTACTACAGTTTCAGAGATTAATTTACAGGA TGATGCTAGTGGAACAGTTTCATTGATATTGAATGTTAATAAAGAGTTTGAAAGGATCAGAAAAGAACTTGTAGCGACTC TTGTAGGAGCAGAAATAGCTAAAATGCCCCTTTTCCCTATTGATAAAATAGAGCAATATTTTAGTGATGAAGGAAAAAAA TTAGGTTTAAAACTCTTAAGTATTAAGTCAAATGGTGATTCTCTTAAGTTGGTTGCTCAATTTGATAATTTGGTTAAGGT TTTAAAGGATTATCTTGAAGAGGAGAGAATGCCTATATTTAAGGTAGAAAACAAGAATGGAAAAAATATTCTTGATATGG ATATTAATTTGAAAAATGTTACCAAGGTCATTAATGAAAATAAGGAGAATGTAAGTGATGCTCTTGCGGCACTCTTGCCT TCAGAAGAAATACCAATGTCTGAGAAGGAATATAAGGATGCATTAGTTTATTTTTTATCAGATTTTACGTCACATGCAAG TGAGCTTATTGATAATTCTGATATTACAGTCAAAATCAAGACGTCAAGAACAATTCAAGAGCAATTTGGATTTAAACAGC TTAACTTAAATAGTTTAGAACTTAAATTAGGTATGATTAGAGCTTTAAGTCTTGAGAGACCAATAAAATTGAGATTGGCT TATTAG
Upstream 100 bases:
>100_bases ATTTTTTTCTCCTATAGTTTCATTGTTTTGATACTTAATATTTTATTATAATAGCTAGTACATGTATATATGTTTGTGTA TATGTTAAGGAGATTATTAA
Downstream 100 bases:
>100_bases GCTTTATGTAAATCTTATTTTAAGAGATAAGATTTACTTCTTATCTCTTTTGATAAATCCTATTAATAGGCCTGTTATTA AAGTTCCCACTAGGATAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MDKFYKFMLVPLIFIACTTVSEINLQDDASGTVSLILNVNKEFERIRKELVATLVGAEIAKMPLFPIDKIEQYFSDEGKK LGLKLLSIKSNGDSLKLVAQFDNLVKVLKDYLEEERMPIFKVENKNGKNILDMDINLKNVTKVINENKENVSDALAALLP SEEIPMSEKEYKDALVYFLSDFTSHASELIDNSDITVKIKTSRTIQEQFGFKQLNLNSLELKLGMIRALSLERPIKLRLA Y
Sequences:
>Translated_241_residues MDKFYKFMLVPLIFIACTTVSEINLQDDASGTVSLILNVNKEFERIRKELVATLVGAEIAKMPLFPIDKIEQYFSDEGKK LGLKLLSIKSNGDSLKLVAQFDNLVKVLKDYLEEERMPIFKVENKNGKNILDMDINLKNVTKVINENKENVSDALAALLP SEEIPMSEKEYKDALVYFLSDFTSHASELIDNSDITVKIKTSRTIQEQFGFKQLNLNSLELKLGMIRALSLERPIKLRLA Y >Mature_241_residues MDKFYKFMLVPLIFIACTTVSEINLQDDASGTVSLILNVNKEFERIRKELVATLVGAEIAKMPLFPIDKIEQYFSDEGKK LGLKLLSIKSNGDSLKLVAQFDNLVKVLKDYLEEERMPIFKVENKNGKNILDMDINLKNVTKVINENKENVSDALAALLP SEEIPMSEKEYKDALVYFLSDFTSHASELIDNSDITVKIKTSRTIQEQFGFKQLNLNSLELKLGMIRALSLERPIKLRLA Y
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27428; Mature: 27428
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKFYKFMLVPLIFIACTTVSEINLQDDASGTVSLILNVNKEFERIRKELVATLVGAEIA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH KMPLFPIDKIEQYFSDEGKKLGLKLLSIKSNGDSLKLVAQFDNLVKVLKDYLEEERMPIF HCCCCCHHHHHHHHHCCCCEECEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCEE KVENKNGKNILDMDINLKNVTKVINENKENVSDALAALLPSEEIPMSEKEYKDALVYFLS EEECCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH DFTSHASELIDNSDITVKIKTSRTIQEQFGFKQLNLNSLELKLGMIRALSLERPIKLRLA HHHHHHHHHHCCCCEEEEEECCCHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCEEEEEC Y C >Mature Secondary Structure MDKFYKFMLVPLIFIACTTVSEINLQDDASGTVSLILNVNKEFERIRKELVATLVGAEIA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH KMPLFPIDKIEQYFSDEGKKLGLKLLSIKSNGDSLKLVAQFDNLVKVLKDYLEEERMPIF HCCCCCHHHHHHHHHCCCCEECEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCEE KVENKNGKNILDMDINLKNVTKVINENKENVSDALAALLPSEEIPMSEKEYKDALVYFLS EEECCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH DFTSHASELIDNSDITVKIKTSRTIQEQFGFKQLNLNSLELKLGMIRALSLERPIKLRLA HHHHHHHHHHCCCCEEEEEECCCHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCEEEEEC Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA