| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
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The map label for this gene is mltD [C]
Identifier: 187918484
GI number: 187918484
Start: 661722
End: 663803
Strand: Direct
Name: mltD [C]
Synonym: BH0625
Alternate gene names: 187918484
Gene position: 661722-663803 (Clockwise)
Preceding gene: 187918483
Following gene: 187918486
Centisome position: 71.75
GC content: 31.56
Gene sequence:
>2082_bases ATGATTATTACTGGATCATTTATGATTATACTGTTCAAAATACTGGAATTAAGGAGAAATACTAGGCTTTTTATTTTTAG GATCAAAGGGCTTAGTATTGTTTTATGGATAATAAGTTCCTTCAGTTTATATGCTGATTTTAAACATGAGGTTGTTAAAG GTGATACCTTATATTCGATCTCTCTTAAATATAAGATTTCAATAAAAGAATTGAAAAATGCAAATAATCTGAAGTCTGAG AGCATTAGAATTGGTCGTATATTAGTCATTCCAAGTTCTTCTAAAGTTAACAAAGTTCTTACTAAGAAGGGTGATGAGAA GTCTAAGTTGAGCAAGCTTGAGCCTGATGCTAAAGTTCATGTTGTTAAGGTCGGCGATACTATTGAAGATATATCTAAAA GATATGGCATTAGAGAAAAGGAATTGGTTGCTTGGAATAATTTGACTTCTAAGATTCTTAAGGTTGGTTCTAAGTTACAT TTGGGTGAGCCTGACTTTTTAAAGCCATATATAGTTAAAAAGGGTGATTCTCTCTCAAAGCTTTCTGTGGATTTTGATAT TAGTATTGCGGATATTATAAGGTTTAATTCTCTAGAGAGTAAGAAGTTAATAATTGGTCAAAAATTATATTTGAAAAGGG TTTCTGGGGATATTCATTTCCATTATGTAAAGCGAGGAGAGACTCTTGGGAAGATTGCATATATTTATGGTGTTACCGCA AAACATCTTGTCCATCTTAATGGAGACAAGGCAATAAATTTAAAGGCGGATTCAATTTTAGATGTCTCAAAAATTATTGA AGAAAATCCATTAAGTTCTAAGTCTTTACAATTAAAGGCCGAAAAGGGCAGTAGTGAAACGTTTATATCTCATAGGGTAT CTGTTGGTGAGACGTTATATAGCATTGCCCGTAAATATGGAGTTTTGCTTGAAGCTCTTAAGAGTTGGAATAATTTAAGT GGGAATAATATTTTTCATAATCAGGAACTTAAAATTTATGATAAGAGAAAAGGTCCAGTTGTTGCAAATAAAGACTCAAG GCAATTTGTGGATAATTCTAGTGATTCTAAGACCAAAGTTAAAGCTATTGCAAATGTTATTTCTGCTAAGAGTAAAAAGT TAGATTTAAATTTTTCCAATGTTTTAAATAATAGAGATGCTTTTGATATTAGTGCTTTAGTTATACTGGATCCTAAAATA CCTATGTTTGAGGCTAATGGGGTTTTTTATTATTGGTATAAGCCTAAAAAAGTAAGTCAGCCAAGTGAATTTTATTCAGA AGATTGGTATTCGCCTCTGAATGCCTATAAGAAAGCAAGTCAGCTTTTTAAAAGTTTTGAAAGTCTTGTGCGATCTCGGC CGATTAAAAATAGTAACTTAAAAAATAAATTAATAATTATTGATCCTGGACATGGAGGACTTGATCCTGGTGCTATTGTT AAAGCTAGAGATGGCCTTAATAATGAGATTTTTGTTGTCGAGGATGAATATGTTTATGATATTGCTTTAAGACTTTATGT GTATCTTAAAGAGTATGGGGCTAATGTTGAACTTACTATTTTATCCCCTGATCATTTAATTAGAGATAGTGTGTCTGCTA ATAATACATTTGTTAATGTTAAGAATGAAGTTTATAATGATTATGATTTGAATAAAACTGATACAGTCGATTCTTGGATA AACGGTACTCAGGAAGGCTTGAAGAAAAGGTTAGCCGTTGTAAAGAAATTTGTAAATAAGTATAAAAATGTTAAGGCAAA AGATATTCTCTATATTAGTTTGCATTCTGATAATAGTGTTGGCGCACCTCGGTGTATGGGATTTTATTACCAGTCTGAGG ACGGAAAGGGATTTGATACCCATTCTAAGAGTGTGATTGAAAAAATGACTGAAGGTTTTAAAAGAGCTCCTTATATTAAG GGACAAAATCTTTATGTGTTAAAACATAATGTTGTTAAAACCAAATTATTAGTTGAAGTTAGAAATTTGGCATTTGATGA GGAAGCTTGGGCTATTAGAGCTTCTAAACTTAGGGACCAGGATTCTAGAATTCTGGCTGATGCTATTTTAAAAATCTTAT AG
Upstream 100 bases:
>100_bases ACAACTTATACAGATTCTACGGGGAAAGTTGTGTCTGATGTGTATTTTGAGGATGGTCATTTTTATGTAGCCAAACGATA TACCTTTTTTTTCAAAAAGT
Downstream 100 bases:
>100_bases ATTTAAGTAAATTATTTTTTCTGGATTTGTATGCTTGACAAAATATTTTCAATTTAGCATAATATCTAGATATTGAGTCC CCTATAGCTCAGCGGTAGAG
Product: autolysin
Products: NA
Alternate protein names: Beta-glycosidase; Peptidoglycan hydrolase [H]
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MIITGSFMIILFKILELRRNTRLFIFRIKGLSIVLWIISSFSLYADFKHEVVKGDTLYSISLKYKISIKELKNANNLKSE SIRIGRILVIPSSSKVNKVLTKKGDEKSKLSKLEPDAKVHVVKVGDTIEDISKRYGIREKELVAWNNLTSKILKVGSKLH LGEPDFLKPYIVKKGDSLSKLSVDFDISIADIIRFNSLESKKLIIGQKLYLKRVSGDIHFHYVKRGETLGKIAYIYGVTA KHLVHLNGDKAINLKADSILDVSKIIEENPLSSKSLQLKAEKGSSETFISHRVSVGETLYSIARKYGVLLEALKSWNNLS GNNIFHNQELKIYDKRKGPVVANKDSRQFVDNSSDSKTKVKAIANVISAKSKKLDLNFSNVLNNRDAFDISALVILDPKI PMFEANGVFYYWYKPKKVSQPSEFYSEDWYSPLNAYKKASQLFKSFESLVRSRPIKNSNLKNKLIIIDPGHGGLDPGAIV KARDGLNNEIFVVEDEYVYDIALRLYVYLKEYGANVELTILSPDHLIRDSVSANNTFVNVKNEVYNDYDLNKTDTVDSWI NGTQEGLKKRLAVVKKFVNKYKNVKAKDILYISLHSDNSVGAPRCMGFYYQSEDGKGFDTHSKSVIEKMTEGFKRAPYIK GQNLYVLKHNVVKTKLLVEVRNLAFDEEAWAIRASKLRDQDSRILADAILKIL
Sequences:
>Translated_693_residues MIITGSFMIILFKILELRRNTRLFIFRIKGLSIVLWIISSFSLYADFKHEVVKGDTLYSISLKYKISIKELKNANNLKSE SIRIGRILVIPSSSKVNKVLTKKGDEKSKLSKLEPDAKVHVVKVGDTIEDISKRYGIREKELVAWNNLTSKILKVGSKLH LGEPDFLKPYIVKKGDSLSKLSVDFDISIADIIRFNSLESKKLIIGQKLYLKRVSGDIHFHYVKRGETLGKIAYIYGVTA KHLVHLNGDKAINLKADSILDVSKIIEENPLSSKSLQLKAEKGSSETFISHRVSVGETLYSIARKYGVLLEALKSWNNLS GNNIFHNQELKIYDKRKGPVVANKDSRQFVDNSSDSKTKVKAIANVISAKSKKLDLNFSNVLNNRDAFDISALVILDPKI PMFEANGVFYYWYKPKKVSQPSEFYSEDWYSPLNAYKKASQLFKSFESLVRSRPIKNSNLKNKLIIIDPGHGGLDPGAIV KARDGLNNEIFVVEDEYVYDIALRLYVYLKEYGANVELTILSPDHLIRDSVSANNTFVNVKNEVYNDYDLNKTDTVDSWI NGTQEGLKKRLAVVKKFVNKYKNVKAKDILYISLHSDNSVGAPRCMGFYYQSEDGKGFDTHSKSVIEKMTEGFKRAPYIK GQNLYVLKHNVVKTKLLVEVRNLAFDEEAWAIRASKLRDQDSRILADAILKIL >Mature_693_residues MIITGSFMIILFKILELRRNTRLFIFRIKGLSIVLWIISSFSLYADFKHEVVKGDTLYSISLKYKISIKELKNANNLKSE SIRIGRILVIPSSSKVNKVLTKKGDEKSKLSKLEPDAKVHVVKVGDTIEDISKRYGIREKELVAWNNLTSKILKVGSKLH LGEPDFLKPYIVKKGDSLSKLSVDFDISIADIIRFNSLESKKLIIGQKLYLKRVSGDIHFHYVKRGETLGKIAYIYGVTA KHLVHLNGDKAINLKADSILDVSKIIEENPLSSKSLQLKAEKGSSETFISHRVSVGETLYSIARKYGVLLEALKSWNNLS GNNIFHNQELKIYDKRKGPVVANKDSRQFVDNSSDSKTKVKAIANVISAKSKKLDLNFSNVLNNRDAFDISALVILDPKI PMFEANGVFYYWYKPKKVSQPSEFYSEDWYSPLNAYKKASQLFKSFESLVRSRPIKNSNLKNKLIIIDPGHGGLDPGAIV KARDGLNNEIFVVEDEYVYDIALRLYVYLKEYGANVELTILSPDHLIRDSVSANNTFVNVKNEVYNDYDLNKTDTVDSWI NGTQEGLKKRLAVVKKFVNKYKNVKAKDILYISLHSDNSVGAPRCMGFYYQSEDGKGFDTHSKSVIEKMTEGFKRAPYIK GQNLYVLKHNVVKTKLLVEVRNLAFDEEAWAIRASKLRDQDSRILADAILKIL
Specific function: Hydrolyzes the cell wall of E.faecalis and M.lysodeikticus. May play an important role in cell wall growth and cell separation [H]
COG id: COG0860
COG function: function code M; N-acetylmuramoyl-L-alanine amidase
Gene ontology:
Cell location: Secreted (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 6 LysM repeats [H]
Homologues:
Organism=Escherichia coli, GI1786405, Length=169, Percent_Identity=30.1775147928994, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013338 - InterPro: IPR002901 - InterPro: IPR018392 - InterPro: IPR002482 [H]
Pfam domain/function: PF01832 Glucosaminidase; PF01476 LysM [H]
EC number: 3.5.1.28
Molecular weight: Translated: 78634; Mature: 78634
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITGSFMIILFKILELRRNTRLFIFRIKGLSIVLWIISSFSLYADFKHEVVKGDTLYSI CEEECHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHEHHHHHHCCCCEEEEE SLKYKISIKELKNANNLKSESIRIGRILVIPSSSKVNKVLTKKGDEKSKLSKLEPDAKVH EEEEEEEHHHHCCCCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCHHHHHHCCCCCEEE VVKVGDTIEDISKRYGIREKELVAWNNLTSKILKVGSKLHLGEPDFLKPYIVKKGDSLSK EEEECCHHHHHHHHCCCCCHHEEEHHHHHHHHHHCCCCEECCCCCCCCCEEEECCCCCEE LSVDFDISIADIIRFNSLESKKLIIGQKLYLKRVSGDIHFHYVKRGETLGKIAYIYGVTA EEEEECCCHHHHHEECCCCCCEEEECHHHEEEECCCCEEEEEEECCCCCCEEEEEEECCC KHLVHLNGDKAINLKADSILDVSKIIEENPLSSKSLQLKAEKGSSETFISHRVSVGETLY CEEEEECCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH SIARKYGVLLEALKSWNNLSGNNIFHNQELKIYDKRKGPVVANKDSRQFVDNSSDSKTKV HHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCCEEECCCCHHHCCCCCCCHHHH KAIANVISAKSKKLDLNFSNVLNNRDAFDISALVILDPKIPMFEANGVFYYWYKPKKVSQ HHHHHHHHCCCCEEECCHHHHHCCCCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCCC PSEFYSEDWYSPLNAYKKASQLFKSFESLVRSRPIKNSNLKNKLIIIDPGHGGLDPGAIV CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEE KARDGLNNEIFVVEDEYVYDIALRLYVYLKEYGANVELTILSPDHLIRDSVSANNTFVNV EECCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCEEEEE KNEVYNDYDLNKTDTVDSWINGTQEGLKKRLAVVKKFVNKYKNVKAKDILYISLHSDNSV EHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC GAPRCMGFYYQSEDGKGFDTHSKSVIEKMTEGFKRAPYIKGQNLYVLKHNVVKTKLLVEV CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHH RNLAFDEEAWAIRASKLRDQDSRILADAILKIL HHHCCCCHHHHEEHHHHCCCHHHHHHHHHHHHC >Mature Secondary Structure MIITGSFMIILFKILELRRNTRLFIFRIKGLSIVLWIISSFSLYADFKHEVVKGDTLYSI CEEECHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHEHHHHHHCCCCEEEEE SLKYKISIKELKNANNLKSESIRIGRILVIPSSSKVNKVLTKKGDEKSKLSKLEPDAKVH EEEEEEEHHHHCCCCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCHHHHHHCCCCCEEE VVKVGDTIEDISKRYGIREKELVAWNNLTSKILKVGSKLHLGEPDFLKPYIVKKGDSLSK EEEECCHHHHHHHHCCCCCHHEEEHHHHHHHHHHCCCCEECCCCCCCCCEEEECCCCCEE LSVDFDISIADIIRFNSLESKKLIIGQKLYLKRVSGDIHFHYVKRGETLGKIAYIYGVTA EEEEECCCHHHHHEECCCCCCEEEECHHHEEEECCCCEEEEEEECCCCCCEEEEEEECCC KHLVHLNGDKAINLKADSILDVSKIIEENPLSSKSLQLKAEKGSSETFISHRVSVGETLY CEEEEECCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH SIARKYGVLLEALKSWNNLSGNNIFHNQELKIYDKRKGPVVANKDSRQFVDNSSDSKTKV HHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCCEEECCCCHHHCCCCCCCHHHH KAIANVISAKSKKLDLNFSNVLNNRDAFDISALVILDPKIPMFEANGVFYYWYKPKKVSQ HHHHHHHHCCCCEEECCHHHHHCCCCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCCC PSEFYSEDWYSPLNAYKKASQLFKSFESLVRSRPIKNSNLKNKLIIIDPGHGGLDPGAIV CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEE KARDGLNNEIFVVEDEYVYDIALRLYVYLKEYGANVELTILSPDHLIRDSVSANNTFVNV EECCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCEEEEE KNEVYNDYDLNKTDTVDSWINGTQEGLKKRLAVVKKFVNKYKNVKAKDILYISLHSDNSV EHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC GAPRCMGFYYQSEDGKGFDTHSKSVIEKMTEGFKRAPYIKGQNLYVLKHNVVKTKLLVEV CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHH RNLAFDEEAWAIRASKLRDQDSRILADAILKIL HHHCCCCHHHHEEHHHHCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1679432; 12663927 [H]