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The map label for this gene is recR [H]

Identifier: 187918328

GI number: 187918328

Start: 488941

End: 489525

Strand: Direct

Name: recR [H]

Synonym: BH0462A

Alternate gene names: 187918328

Gene position: 488941-489525 (Clockwise)

Preceding gene: 187918327

Following gene: 187918329

Centisome position: 53.01

GC content: 31.97

Gene sequence:

>585_bases
TTGATTATACAAGATTTAATTGTTTTAGTTTCTAAATTGCCAGGCATAGGTAAAAAGACAGCATCACGAATGGTTTATGA
TATTTTGTATAAGGGTGAGGAGTATGCAAAAAATTTGGGACAAATTTTAAGCAATCTCCATTCTAGCATAAGAAAATGTA
AAAATTGTTACAATTTTGCTGAGGAAGAATTTTGTGATATTTGTATGGATTTAAGTAGGAATAAAAATGTGATTTGTGTT
GTGGAGATGCCGCAAGACTTAGAGGTTATTGAATCTACTGGGGAATATGATGGATTTTATTTTGTACTTCATGGTCATCT
TGATCCTTTAAAAGATATTGGTCCAAATAGATTAAATCTTGATAAGTTAGAAGGTTATGTTGGTGCCCTTGAGGCTCAGG
AAGTGATTATTGCTACAGAATTTAGCATTGAAGGGGATGTAACTGCAAATTATATTAGTAGTATTTTAAAGAATTTAGAT
ATTAATGTCACAAGAATAGCATCTGGTCTTCCTGTTGGAGGTAGCATTAGTAATGCAGATAAAATGACTACCCTGAGGGC
TTTGCGTTTAAGATTTAATATGTAA

Upstream 100 bases:

>100_bases
TGAGCACATGATAAAATCGGCTTTTAATGATGCTATTTCTAAGGTTAAGGAAGAGATAAAATCAAAAACAATGGGCTCTA
TGCCATTTGGGATTTAAGAT

Downstream 100 bases:

>100_bases
GATTCAAGATGCATTTATTTTTTATAGATTTTAAAATTGTTTCAAGTGATTTTTGCTCATTTCAAGTATTAATTTTAATT
CTTTAATTTATAGTTTGAGA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MIIQDLIVLVSKLPGIGKKTASRMVYDILYKGEEYAKNLGQILSNLHSSIRKCKNCYNFAEEEFCDICMDLSRNKNVICV
VEMPQDLEVIESTGEYDGFYFVLHGHLDPLKDIGPNRLNLDKLEGYVGALEAQEVIIATEFSIEGDVTANYISSILKNLD
INVTRIASGLPVGGSISNADKMTTLRALRLRFNM

Sequences:

>Translated_194_residues
MIIQDLIVLVSKLPGIGKKTASRMVYDILYKGEEYAKNLGQILSNLHSSIRKCKNCYNFAEEEFCDICMDLSRNKNVICV
VEMPQDLEVIESTGEYDGFYFVLHGHLDPLKDIGPNRLNLDKLEGYVGALEAQEVIIATEFSIEGDVTANYISSILKNLD
INVTRIASGLPVGGSISNADKMTTLRALRLRFNM
>Mature_194_residues
MIIQDLIVLVSKLPGIGKKTASRMVYDILYKGEEYAKNLGQILSNLHSSIRKCKNCYNFAEEEFCDICMDLSRNKNVICV
VEMPQDLEVIESTGEYDGFYFVLHGHLDPLKDIGPNRLNLDKLEGYVGALEAQEVIIATEFSIEGDVTANYISSILKNLD
INVTRIASGLPVGGSISNADKMTTLRALRLRFNM

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=196, Percent_Identity=40.3061224489796, Blast_Score=159, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 21656; Mature: 21656

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIQDLIVLVSKLPGIGKKTASRMVYDILYKGEEYAKNLGQILSNLHSSIRKCKNCYNFA
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
EEEFCDICMDLSRNKNVICVVEMPQDLEVIESTGEYDGFYFVLHGHLDPLKDIGPNRLNL
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEECCCCCHHHCCCCCCCH
DKLEGYVGALEAQEVIIATEFSIEGDVTANYISSILKNLDINVTRIASGLPVGGSISNAD
HHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHH
KMTTLRALRLRFNM
HHHHHHHHHHHCCC
>Mature Secondary Structure
MIIQDLIVLVSKLPGIGKKTASRMVYDILYKGEEYAKNLGQILSNLHSSIRKCKNCYNFA
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
EEEFCDICMDLSRNKNVICVVEMPQDLEVIESTGEYDGFYFVLHGHLDPLKDIGPNRLNL
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEECCCCCHHHCCCCCCCH
DKLEGYVGALEAQEVIIATEFSIEGDVTANYISSILKNLDINVTRIASGLPVGGSISNAD
HHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHH
KMTTLRALRLRFNM
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA