The gene/protein map for NC_010673 is currently unavailable.
Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

Click here to switch to the map view.

The map label for this gene is hspA [H]

Identifier: 187918312

GI number: 187918312

Start: 470034

End: 470444

Strand: Direct

Name: hspA [H]

Synonym: BH0445A

Alternate gene names: 187918312

Gene position: 470034-470444 (Clockwise)

Preceding gene: 187918311

Following gene: 187918319

Centisome position: 50.96

GC content: 30.41

Gene sequence:

>411_bases
GTGTGGTTAACAAATTATAAGAAAAGTTTTATAGATTTTTTGAATGATGATTTTGATTTTATGCGTTCTGGAGGCGTTCA
AAATGTTCCAGTTAATATTAAGGATAAGGGAAAGTCATTTGCTCTTGAAGCTTACTTGCCGGGGATAAAAAGAGACGATA
TATCAATTGTAATTAAAAATGATTATTTGACAATAAGTTATGAGAGTAAGGATGAGGCGGAAGAGCAAAATGATCAGTAC
TTGAGAGTAGAGAGAAGAGATATCTCTTTTTCAAGAAGTTTTAGATTGTCTGGAAATATTGATCAAAATAAAATCAAATC
AGAACTAAAAAATGGTGTTTTGCTTATTAATCTTCCTAAAAAGCCGGAAGTTGTTGAGAAAACCCAAGAGAAAAAGATTG
TAATTGAATAA

Upstream 100 bases:

>100_bases
CTTTTTGTTTATTTATTTTTATATTAATTCAATATTAAAATTGAATGCGTGGTATGGTTTTGCATAGGATTTTATATGAA
TTGGTAAAAAGGAGGTTTAT

Downstream 100 bases:

>100_bases
ATTTTGTGGCTTTTAATGAGTTGTAATTAAGGGATGCCATGGCATCCTTAATTTTTATAATTTTCAATTGTTAAATTTAA
TTCTCTTAGTTGTTCATTTG

Product: small heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MWLTNYKKSFIDFLNDDFDFMRSGGVQNVPVNIKDKGKSFALEAYLPGIKRDDISIVIKNDYLTISYESKDEAEEQNDQY
LRVERRDISFSRSFRLSGNIDQNKIKSELKNGVLLINLPKKPEVVEKTQEKKIVIE

Sequences:

>Translated_136_residues
MWLTNYKKSFIDFLNDDFDFMRSGGVQNVPVNIKDKGKSFALEAYLPGIKRDDISIVIKNDYLTISYESKDEAEEQNDQY
LRVERRDISFSRSFRLSGNIDQNKIKSELKNGVLLINLPKKPEVVEKTQEKKIVIE
>Mature_136_residues
MWLTNYKKSFIDFLNDDFDFMRSGGVQNVPVNIKDKGKSFALEAYLPGIKRDDISIVIKNDYLTISYESKDEAEEQNDQY
LRVERRDISFSRSFRLSGNIDQNKIKSELKNGVLLINLPKKPEVVEKTQEKKIVIE

Specific function: May stabilize cellular components during stress and spore formation [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 15853; Mature: 15853

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS00449 ATPASE_A ; PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLTNYKKSFIDFLNDDFDFMRSGGVQNVPVNIKDKGKSFALEAYLPGIKRDDISIVIKN
CCCCHHHHHHHHHHCCCHHHHHCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEEC
DYLTISYESKDEAEEQNDQYLRVERRDISFSRSFRLSGNIDQNKIKSELKNGVLLINLPK
CEEEEEECCCCCCHHCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHCCCEEEEECCC
KPEVVEKTQEKKIVIE
CCHHHHHHCCCEEEEC
>Mature Secondary Structure
MWLTNYKKSFIDFLNDDFDFMRSGGVQNVPVNIKDKGKSFALEAYLPGIKRDDISIVIKN
CCCCHHHHHHHHHHCCCHHHHHCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEEC
DYLTISYESKDEAEEQNDQYLRVERRDISFSRSFRLSGNIDQNKIKSELKNGVLLINLPK
CEEEEEECCCCCCHHCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHCCCEEEEECCC
KPEVVEKTQEKKIVIE
CCHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226695; 8423161 [H]