Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is hspA [H]
Identifier: 187918312
GI number: 187918312
Start: 470034
End: 470444
Strand: Direct
Name: hspA [H]
Synonym: BH0445A
Alternate gene names: 187918312
Gene position: 470034-470444 (Clockwise)
Preceding gene: 187918311
Following gene: 187918319
Centisome position: 50.96
GC content: 30.41
Gene sequence:
>411_bases GTGTGGTTAACAAATTATAAGAAAAGTTTTATAGATTTTTTGAATGATGATTTTGATTTTATGCGTTCTGGAGGCGTTCA AAATGTTCCAGTTAATATTAAGGATAAGGGAAAGTCATTTGCTCTTGAAGCTTACTTGCCGGGGATAAAAAGAGACGATA TATCAATTGTAATTAAAAATGATTATTTGACAATAAGTTATGAGAGTAAGGATGAGGCGGAAGAGCAAAATGATCAGTAC TTGAGAGTAGAGAGAAGAGATATCTCTTTTTCAAGAAGTTTTAGATTGTCTGGAAATATTGATCAAAATAAAATCAAATC AGAACTAAAAAATGGTGTTTTGCTTATTAATCTTCCTAAAAAGCCGGAAGTTGTTGAGAAAACCCAAGAGAAAAAGATTG TAATTGAATAA
Upstream 100 bases:
>100_bases CTTTTTGTTTATTTATTTTTATATTAATTCAATATTAAAATTGAATGCGTGGTATGGTTTTGCATAGGATTTTATATGAA TTGGTAAAAAGGAGGTTTAT
Downstream 100 bases:
>100_bases ATTTTGTGGCTTTTAATGAGTTGTAATTAAGGGATGCCATGGCATCCTTAATTTTTATAATTTTCAATTGTTAAATTTAA TTCTCTTAGTTGTTCATTTG
Product: small heat shock protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MWLTNYKKSFIDFLNDDFDFMRSGGVQNVPVNIKDKGKSFALEAYLPGIKRDDISIVIKNDYLTISYESKDEAEEQNDQY LRVERRDISFSRSFRLSGNIDQNKIKSELKNGVLLINLPKKPEVVEKTQEKKIVIE
Sequences:
>Translated_136_residues MWLTNYKKSFIDFLNDDFDFMRSGGVQNVPVNIKDKGKSFALEAYLPGIKRDDISIVIKNDYLTISYESKDEAEEQNDQY LRVERRDISFSRSFRLSGNIDQNKIKSELKNGVLLINLPKKPEVVEKTQEKKIVIE >Mature_136_residues MWLTNYKKSFIDFLNDDFDFMRSGGVQNVPVNIKDKGKSFALEAYLPGIKRDDISIVIKNDYLTISYESKDEAEEQNDQY LRVERRDISFSRSFRLSGNIDQNKIKSELKNGVLLINLPKKPEVVEKTQEKKIVIE
Specific function: May stabilize cellular components during stress and spore formation [H]
COG id: COG0071
COG function: function code O; Molecular chaperone (small heat shock protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small heat shock protein (HSP20) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002068 - InterPro: IPR008978 [H]
Pfam domain/function: PF00011 HSP20 [H]
EC number: NA
Molecular weight: Translated: 15853; Mature: 15853
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00449 ATPASE_A ; PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLTNYKKSFIDFLNDDFDFMRSGGVQNVPVNIKDKGKSFALEAYLPGIKRDDISIVIKN CCCCHHHHHHHHHHCCCHHHHHCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEEC DYLTISYESKDEAEEQNDQYLRVERRDISFSRSFRLSGNIDQNKIKSELKNGVLLINLPK CEEEEEECCCCCCHHCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHCCCEEEEECCC KPEVVEKTQEKKIVIE CCHHHHHHCCCEEEEC >Mature Secondary Structure MWLTNYKKSFIDFLNDDFDFMRSGGVQNVPVNIKDKGKSFALEAYLPGIKRDDISIVIKN CCCCHHHHHHHHHHCCCHHHHHCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEEC DYLTISYESKDEAEEQNDQYLRVERRDISFSRSFRLSGNIDQNKIKSELKNGVLLINLPK CEEEEEECCCCCCHHCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHCCCEEEEECCC KPEVVEKTQEKKIVIE CCHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226695; 8423161 [H]