Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918270
Identifier: 187918270
GI number: 187918270
Start: 419298
End: 419897
Strand: Direct
Name: 187918270
Synonym: BH0405
Alternate gene names: NA
Gene position: 419298-419897 (Clockwise)
Preceding gene: 187918268
Following gene: 187918271
Centisome position: 45.46
GC content: 31.83
Gene sequence:
>600_bases ATGAAAACATTATTAAAACTGATTATGATTTTTTTAACAAGTTTATCTGTTGCAACAACACTTGATCCAACGGCTCTTAA TAGAATATTAAACAAGCAACAAGCACAACAAAGCACATTCGGAATAGGATTTGGAATTGGCAATCCCATAGTCAATATCA TTATTAATTTCCCATATGTAGAAATAAACCTTGGATATGGGGGCTTTAATGGATTACATCCTAACAATTTCATACCTTAT ATTATTTTCGGAACTGATGCCCTATTTAAAGAAGAAATTTATGAAAATACAATGATCGCCGGTGGAATTGGTATAGGAGT TGACTTATCTCAAATAAAATCAAATGAGCAAGATGCTTCAAATATAGCCGGAAAAAATAATACAACCAAACAAGAGGAAT TTTCAATAACCTCATCTAACAATAGATTGGGCATTGTGCTTAGGCTTCCTATTATATTGGAATACAGTTTCTTTAAAAAG ATTGTAATAGGCTTTAAGGCTGTAACAACAATTGGCGGAACAATGATATTCAACCCCACATCAACGGAAGGAATCAGATT CGCATTTTTTGGTTTTGGATTCATAAAAATATACATGTAA
Upstream 100 bases:
>100_bases TATCAACTACTAGAGAATCCATTAATATCTTACTTTTTATGAAATATAATTTTAAGAATTATGCACACCTAATCAGAAGA CATAAGTTGAAGGAGAATTT
Downstream 100 bases:
>100_bases AGGAAAATTAATGGAAAAAAACGCTCAAAAAATATTTATATTATTATTAATATTTGGCTTATACCATTTTGCATTCTCTC AATCTAATGAAACTTATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKTLLKLIMIFLTSLSVATTLDPTALNRILNKQQAQQSTFGIGFGIGNPIVNIIINFPYVEINLGYGGFNGLHPNNFIPY IIFGTDALFKEEIYENTMIAGGIGIGVDLSQIKSNEQDASNIAGKNNTTKQEEFSITSSNNRLGIVLRLPIILEYSFFKK IVIGFKAVTTIGGTMIFNPTSTEGIRFAFFGFGFIKIYM
Sequences:
>Translated_199_residues MKTLLKLIMIFLTSLSVATTLDPTALNRILNKQQAQQSTFGIGFGIGNPIVNIIINFPYVEINLGYGGFNGLHPNNFIPY IIFGTDALFKEEIYENTMIAGGIGIGVDLSQIKSNEQDASNIAGKNNTTKQEEFSITSSNNRLGIVLRLPIILEYSFFKK IVIGFKAVTTIGGTMIFNPTSTEGIRFAFFGFGFIKIYM >Mature_199_residues MKTLLKLIMIFLTSLSVATTLDPTALNRILNKQQAQQSTFGIGFGIGNPIVNIIINFPYVEINLGYGGFNGLHPNNFIPY IIFGTDALFKEEIYENTMIAGGIGIGVDLSQIKSNEQDASNIAGKNNTTKQEEFSITSSNNRLGIVLRLPIILEYSFFKK IVIGFKAVTTIGGTMIFNPTSTEGIRFAFFGFGFIKIYM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21926; Mature: 21926
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLLKLIMIFLTSLSVATTLDPTALNRILNKQQAQQSTFGIGFGIGNPIVNIIINFPYV CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEEEECCEE EINLGYGGFNGLHPNNFIPYIIFGTDALFKEEIYENTMIAGGIGIGVDLSQIKSNEQDAS EEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCEEECCCCCCCCHHHHHCCCCHHH NIAGKNNTTKQEEFSITSSNNRLGIVLRLPIILEYSFFKKIVIGFKAVTTIGGTMIFNPT HCCCCCCCCCCCEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCC STEGIRFAFFGFGFIKIYM CCCCEEEEEEEEEEEEEEC >Mature Secondary Structure MKTLLKLIMIFLTSLSVATTLDPTALNRILNKQQAQQSTFGIGFGIGNPIVNIIINFPYV CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEEEECCEE EINLGYGGFNGLHPNNFIPYIIFGTDALFKEEIYENTMIAGGIGIGVDLSQIKSNEQDAS EEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCEEECCCCCCCCHHHHHCCCCHHH NIAGKNNTTKQEEFSITSSNNRLGIVLRLPIILEYSFFKKIVIGFKAVTTIGGTMIFNPT HCCCCCCCCCCCEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCC STEGIRFAFFGFGFIKIYM CCCCEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA