Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918271
Identifier: 187918271
GI number: 187918271
Start: 419908
End: 420675
Strand: Direct
Name: 187918271
Synonym: BH0406
Alternate gene names: NA
Gene position: 419908-420675 (Clockwise)
Preceding gene: 187918270
Following gene: 187918274
Centisome position: 45.53
GC content: 35.16
Gene sequence:
>768_bases ATGGAAAAAAACGCTCAAAAAATATTTATATTATTATTAATATTTGGCTTATACCATTTTGCATTCTCTCAATCTAATGA AACTTATTCCATTAAATGCCAACAAGAAGATGATGGGATCATCTGCACCACAAATGATAAACCTATCCCTCCAAAGCCTC AACCAGCCCCTCCAAAACCTCAACCTCAACCTCAACCAGCCCCTCCAAAACCTCAACCTCAACCAGCCCCTCCAAAACCT CAACCTCAACCCACTCCTCCAAAATCCCAACCAAACATTACCACAAATCCCCACGCAATGAAAATCAAAAAACATCCTTA TTCATTTGCAGCAGGAACAGGAATTGGAAATCCTCTTATCAATCTTTTAATCTCGGTTCCATATGTAGACATAGATCTTG GATATGGTAGTTTCTTATACTTCAACTCTACAAATTTTAAACCTTACAATTTAATTGCCATTGATCTAATTTTCAGACAA CAAATAGGAAAATCTTTCATAGTTGGAGGGGGCTTTGGAGTTGGGGCAGACTGGTCCCAAGCAAATCTAACTTCCCCTGG AAGTAAACAACCTGCTCCTTATGACAGAATAGCAATAGCAACCAGATTACCTTTATCAATAGAATATAAAATTATAAAAA ATTTATCATTAGGATTTAAAATTTATCCTACACTAGGTCCAACAATATTTCTCACAAAACCAAAAATAGTGTTTGAAGGA ATGAGATTTAAATTTTTCTCAATTGGGTTCATCAAAGTTTTAATATAA
Upstream 100 bases:
>100_bases ATTGGCGGAACAATGATATTCAACCCCACATCAACGGAAGGAATCAGATTCGCATTTTTTGGTTTTGGATTCATAAAAAT ATACATGTAAAGGAAAATTA
Downstream 100 bases:
>100_bases ATAATAAACTTTACTAAAGTCAAAATACCAACATTTTACTATAAAGATAGTGCAATAAAAATTACTCCATTTCCACAAAT TAATAATTCTTTACCACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MEKNAQKIFILLLIFGLYHFAFSQSNETYSIKCQQEDDGIICTTNDKPIPPKPQPAPPKPQPQPQPAPPKPQPQPAPPKP QPQPTPPKSQPNITTNPHAMKIKKHPYSFAAGTGIGNPLINLLISVPYVDIDLGYGSFLYFNSTNFKPYNLIAIDLIFRQ QIGKSFIVGGGFGVGADWSQANLTSPGSKQPAPYDRIAIATRLPLSIEYKIIKNLSLGFKIYPTLGPTIFLTKPKIVFEG MRFKFFSIGFIKVLI
Sequences:
>Translated_255_residues MEKNAQKIFILLLIFGLYHFAFSQSNETYSIKCQQEDDGIICTTNDKPIPPKPQPAPPKPQPQPQPAPPKPQPQPAPPKP QPQPTPPKSQPNITTNPHAMKIKKHPYSFAAGTGIGNPLINLLISVPYVDIDLGYGSFLYFNSTNFKPYNLIAIDLIFRQ QIGKSFIVGGGFGVGADWSQANLTSPGSKQPAPYDRIAIATRLPLSIEYKIIKNLSLGFKIYPTLGPTIFLTKPKIVFEG MRFKFFSIGFIKVLI >Mature_255_residues MEKNAQKIFILLLIFGLYHFAFSQSNETYSIKCQQEDDGIICTTNDKPIPPKPQPAPPKPQPQPQPAPPKPQPQPAPPKP QPQPTPPKSQPNITTNPHAMKIKKHPYSFAAGTGIGNPLINLLISVPYVDIDLGYGSFLYFNSTNFKPYNLIAIDLIFRQ QIGKSFIVGGGFGVGADWSQANLTSPGSKQPAPYDRIAIATRLPLSIEYKIIKNLSLGFKIYPTLGPTIFLTKPKIVFEG MRFKFFSIGFIKVLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28220; Mature: 28220
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNAQKIFILLLIFGLYHFAFSQSNETYSIKCQQEDDGIICTTNDKPIPPKPQPAPPKP CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCC QPQPQPAPPKPQPQPAPPKPQPQPTPPKSQPNITTNPHAMKIKKHPYSFAAGTGIGNPLI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHH NLLISVPYVDIDLGYGSFLYFNSTNFKPYNLIAIDLIFRQQIGKSFIVGGGFGVGADWSQ HHHEECCEEEEECCCCEEEEEECCCCCCEEEEEEEEHHHHHCCCEEEEECCCCCCCCCCC ANLTSPGSKQPAPYDRIAIATRLPLSIEYKIIKNLSLGFKIYPTLGPTIFLTKPKIVFEG CCCCCCCCCCCCCHHEEEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEECCHHEECC MRFKFFSIGFIKVLI CEEEEEEEEEEEEEC >Mature Secondary Structure MEKNAQKIFILLLIFGLYHFAFSQSNETYSIKCQQEDDGIICTTNDKPIPPKPQPAPPKP CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCC QPQPQPAPPKPQPQPAPPKPQPQPTPPKSQPNITTNPHAMKIKKHPYSFAAGTGIGNPLI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHH NLLISVPYVDIDLGYGSFLYFNSTNFKPYNLIAIDLIFRQQIGKSFIVGGGFGVGADWSQ HHHEECCEEEEECCCCEEEEEECCCCCCEEEEEEEEHHHHHCCCEEEEECCCCCCCCCCC ANLTSPGSKQPAPYDRIAIATRLPLSIEYKIIKNLSLGFKIYPTLGPTIFLTKPKIVFEG CCCCCCCCCCCCCHHEEEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEECCHHEECC MRFKFFSIGFIKVLI CEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA