Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

Click here to switch to the map view.

The map label for this gene is 187918271

Identifier: 187918271

GI number: 187918271

Start: 419908

End: 420675

Strand: Direct

Name: 187918271

Synonym: BH0406

Alternate gene names: NA

Gene position: 419908-420675 (Clockwise)

Preceding gene: 187918270

Following gene: 187918274

Centisome position: 45.53

GC content: 35.16

Gene sequence:

>768_bases
ATGGAAAAAAACGCTCAAAAAATATTTATATTATTATTAATATTTGGCTTATACCATTTTGCATTCTCTCAATCTAATGA
AACTTATTCCATTAAATGCCAACAAGAAGATGATGGGATCATCTGCACCACAAATGATAAACCTATCCCTCCAAAGCCTC
AACCAGCCCCTCCAAAACCTCAACCTCAACCTCAACCAGCCCCTCCAAAACCTCAACCTCAACCAGCCCCTCCAAAACCT
CAACCTCAACCCACTCCTCCAAAATCCCAACCAAACATTACCACAAATCCCCACGCAATGAAAATCAAAAAACATCCTTA
TTCATTTGCAGCAGGAACAGGAATTGGAAATCCTCTTATCAATCTTTTAATCTCGGTTCCATATGTAGACATAGATCTTG
GATATGGTAGTTTCTTATACTTCAACTCTACAAATTTTAAACCTTACAATTTAATTGCCATTGATCTAATTTTCAGACAA
CAAATAGGAAAATCTTTCATAGTTGGAGGGGGCTTTGGAGTTGGGGCAGACTGGTCCCAAGCAAATCTAACTTCCCCTGG
AAGTAAACAACCTGCTCCTTATGACAGAATAGCAATAGCAACCAGATTACCTTTATCAATAGAATATAAAATTATAAAAA
ATTTATCATTAGGATTTAAAATTTATCCTACACTAGGTCCAACAATATTTCTCACAAAACCAAAAATAGTGTTTGAAGGA
ATGAGATTTAAATTTTTCTCAATTGGGTTCATCAAAGTTTTAATATAA

Upstream 100 bases:

>100_bases
ATTGGCGGAACAATGATATTCAACCCCACATCAACGGAAGGAATCAGATTCGCATTTTTTGGTTTTGGATTCATAAAAAT
ATACATGTAAAGGAAAATTA

Downstream 100 bases:

>100_bases
ATAATAAACTTTACTAAAGTCAAAATACCAACATTTTACTATAAAGATAGTGCAATAAAAATTACTCCATTTCCACAAAT
TAATAATTCTTTACCACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MEKNAQKIFILLLIFGLYHFAFSQSNETYSIKCQQEDDGIICTTNDKPIPPKPQPAPPKPQPQPQPAPPKPQPQPAPPKP
QPQPTPPKSQPNITTNPHAMKIKKHPYSFAAGTGIGNPLINLLISVPYVDIDLGYGSFLYFNSTNFKPYNLIAIDLIFRQ
QIGKSFIVGGGFGVGADWSQANLTSPGSKQPAPYDRIAIATRLPLSIEYKIIKNLSLGFKIYPTLGPTIFLTKPKIVFEG
MRFKFFSIGFIKVLI

Sequences:

>Translated_255_residues
MEKNAQKIFILLLIFGLYHFAFSQSNETYSIKCQQEDDGIICTTNDKPIPPKPQPAPPKPQPQPQPAPPKPQPQPAPPKP
QPQPTPPKSQPNITTNPHAMKIKKHPYSFAAGTGIGNPLINLLISVPYVDIDLGYGSFLYFNSTNFKPYNLIAIDLIFRQ
QIGKSFIVGGGFGVGADWSQANLTSPGSKQPAPYDRIAIATRLPLSIEYKIIKNLSLGFKIYPTLGPTIFLTKPKIVFEG
MRFKFFSIGFIKVLI
>Mature_255_residues
MEKNAQKIFILLLIFGLYHFAFSQSNETYSIKCQQEDDGIICTTNDKPIPPKPQPAPPKPQPQPQPAPPKPQPQPAPPKP
QPQPTPPKSQPNITTNPHAMKIKKHPYSFAAGTGIGNPLINLLISVPYVDIDLGYGSFLYFNSTNFKPYNLIAIDLIFRQ
QIGKSFIVGGGFGVGADWSQANLTSPGSKQPAPYDRIAIATRLPLSIEYKIIKNLSLGFKIYPTLGPTIFLTKPKIVFEG
MRFKFFSIGFIKVLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28220; Mature: 28220

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNAQKIFILLLIFGLYHFAFSQSNETYSIKCQQEDDGIICTTNDKPIPPKPQPAPPKP
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCC
QPQPQPAPPKPQPQPAPPKPQPQPTPPKSQPNITTNPHAMKIKKHPYSFAAGTGIGNPLI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHH
NLLISVPYVDIDLGYGSFLYFNSTNFKPYNLIAIDLIFRQQIGKSFIVGGGFGVGADWSQ
HHHEECCEEEEECCCCEEEEEECCCCCCEEEEEEEEHHHHHCCCEEEEECCCCCCCCCCC
ANLTSPGSKQPAPYDRIAIATRLPLSIEYKIIKNLSLGFKIYPTLGPTIFLTKPKIVFEG
CCCCCCCCCCCCCHHEEEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEECCHHEECC
MRFKFFSIGFIKVLI
CEEEEEEEEEEEEEC
>Mature Secondary Structure
MEKNAQKIFILLLIFGLYHFAFSQSNETYSIKCQQEDDGIICTTNDKPIPPKPQPAPPKP
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCC
QPQPQPAPPKPQPQPAPPKPQPQPTPPKSQPNITTNPHAMKIKKHPYSFAAGTGIGNPLI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHH
NLLISVPYVDIDLGYGSFLYFNSTNFKPYNLIAIDLIFRQQIGKSFIVGGGFGVGADWSQ
HHHEECCEEEEECCCCEEEEEECCCCCCEEEEEEEEHHHHHCCCEEEEECCCCCCCCCCC
ANLTSPGSKQPAPYDRIAIATRLPLSIEYKIIKNLSLGFKIYPTLGPTIFLTKPKIVFEG
CCCCCCCCCCCCCHHEEEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEECCHHEECC
MRFKFFSIGFIKVLI
CEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA