Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918265
Identifier: 187918265
GI number: 187918265
Start: 412173
End: 413480
Strand: Direct
Name: 187918265
Synonym: BH0398A
Alternate gene names: NA
Gene position: 412173-413480 (Clockwise)
Preceding gene: 187918244
Following gene: 187918266
Centisome position: 44.69
GC content: 28.52
Gene sequence:
>1308_bases ATGAATAAAAAATTAATTTATATCTTATCGATAATATTATTTCTATCTTGTTTTAATAAGAACAATAAATACGGTATTGT TCTAGATTCAAACAACAGAGAAAAACTACCAAACGGCTCACTTGTCAAAATAGAAAATACCGATCAAGAAAAACAAATAA TAACAATAAACTATAATGAAACAAAATTTATCGTACATAAATTCACAATAGAAGAGTTTCAAACAAAAAAAGAAGCAGAA AAATTTAAACTAAGTATTCAACCATACGTAAACAAGTATGCTATAAGTAAAAAAGATCTCTTGCCCTTAAGAACATCTCC GGACAGCTATAGAGAAAACATAATATATAGAATTCCAAAAGAAGCTATCTTGAAAATAATACACATTGGGGAAGAAACAG AAGCAGGCTCACTTAAAGGGAGATGGCTACACGCACTAACAAAAGATGGATATAAAGGTTATGTTTTCAATTACTCACTT GAAATTTTTGATAATATTCCAGGAACAATACTCACAAGTCCATTAGATCAAGCCTCACAAAATGATATAATCAATACGTT TAAAAATATCAAATATTTAAGACCGCTATACTACGAAAAAATGATCGCCAATAACACTTATAACACCAATCTACTAAGAG AAGACTATGGACTATTTTTTACTCCCAAAAATGAAATAAAAATTAATATGCCCGAATTAAACTTACATTGCAAATTCAAT ATTGTTGAGGAGGTCAAACCTAATGGATTTCTATTTAGATCTGAAACTTCAGATGAAGATTTTATTATCTTAGAAAGAGA AACGCAAAACTACTACAAGTCAATCGTAAAAGTTAAAGAACACAACTTTGAATCTAAATTCGTTATCATTGAACAAAATA TCGAAAAAATTATTCTTGAAGCAGAAAAGCAAAATCAAAATCTAATAAATAGATTAATATCTTATGGAACCTTAATAAAT ACACAATATGGAAATATTGAATTTAAAAGCGATAAAACTTTTGTCTGGGAAACAGATAAAAAAATTTATAATCTCCCAAG CTCTGGAACATTTGAAATAATAGGACTTAGTCCAAATCTACAGATTTCATATAAAAACGCTGTTAAACTAATGACCACGG AAGGAAAAGAATATTTCTGTCTGCTAGACTATACAAACAATGCCTTACAACTCATATTCATATCCCCTGAAAGCGTTGAA GATGATTTAATAATAATCAATGACAAGGATAAAATCGCAATCATACTGTTTAATAGCGCTCAGCCTAGTCAAGATATACT TACAAAACAATCCCAAAAAACTACTTAA
Upstream 100 bases:
>100_bases CCAAACGCTTGAATTAATAACTTCATTATTTTTATTATATAATAAAGGTCATGCATAACAAAACACATCTTAGGATCAAT AAAAACTATCAGGATTTAAC
Downstream 100 bases:
>100_bases AGGTTAGAATCAATGAAAATAATGCGCATACTATTATTAACACAACTGATTACATTCTTAAATGCAAATGAAAACACAAC AATAATAAAAGAATTATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MNKKLIYILSIILFLSCFNKNNKYGIVLDSNNREKLPNGSLVKIENTDQEKQIITINYNETKFIVHKFTIEEFQTKKEAE KFKLSIQPYVNKYAISKKDLLPLRTSPDSYRENIIYRIPKEAILKIIHIGEETEAGSLKGRWLHALTKDGYKGYVFNYSL EIFDNIPGTILTSPLDQASQNDIINTFKNIKYLRPLYYEKMIANNTYNTNLLREDYGLFFTPKNEIKINMPELNLHCKFN IVEEVKPNGFLFRSETSDEDFIILERETQNYYKSIVKVKEHNFESKFVIIEQNIEKIILEAEKQNQNLINRLISYGTLIN TQYGNIEFKSDKTFVWETDKKIYNLPSSGTFEIIGLSPNLQISYKNAVKLMTTEGKEYFCLLDYTNNALQLIFISPESVE DDLIIINDKDKIAIILFNSAQPSQDILTKQSQKTT
Sequences:
>Translated_435_residues MNKKLIYILSIILFLSCFNKNNKYGIVLDSNNREKLPNGSLVKIENTDQEKQIITINYNETKFIVHKFTIEEFQTKKEAE KFKLSIQPYVNKYAISKKDLLPLRTSPDSYRENIIYRIPKEAILKIIHIGEETEAGSLKGRWLHALTKDGYKGYVFNYSL EIFDNIPGTILTSPLDQASQNDIINTFKNIKYLRPLYYEKMIANNTYNTNLLREDYGLFFTPKNEIKINMPELNLHCKFN IVEEVKPNGFLFRSETSDEDFIILERETQNYYKSIVKVKEHNFESKFVIIEQNIEKIILEAEKQNQNLINRLISYGTLIN TQYGNIEFKSDKTFVWETDKKIYNLPSSGTFEIIGLSPNLQISYKNAVKLMTTEGKEYFCLLDYTNNALQLIFISPESVE DDLIIINDKDKIAIILFNSAQPSQDILTKQSQKTT >Mature_435_residues MNKKLIYILSIILFLSCFNKNNKYGIVLDSNNREKLPNGSLVKIENTDQEKQIITINYNETKFIVHKFTIEEFQTKKEAE KFKLSIQPYVNKYAISKKDLLPLRTSPDSYRENIIYRIPKEAILKIIHIGEETEAGSLKGRWLHALTKDGYKGYVFNYSL EIFDNIPGTILTSPLDQASQNDIINTFKNIKYLRPLYYEKMIANNTYNTNLLREDYGLFFTPKNEIKINMPELNLHCKFN IVEEVKPNGFLFRSETSDEDFIILERETQNYYKSIVKVKEHNFESKFVIIEQNIEKIILEAEKQNQNLINRLISYGTLIN TQYGNIEFKSDKTFVWETDKKIYNLPSSGTFEIIGLSPNLQISYKNAVKLMTTEGKEYFCLLDYTNNALQLIFISPESVE DDLIIINDKDKIAIILFNSAQPSQDILTKQSQKTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50711; Mature: 50711
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLIYILSIILFLSCFNKNNKYGIVLDSNNREKLPNGSLVKIENTDQEKQIITINYNE CCCEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECC TKFIVHKFTIEEFQTKKEAEKFKLSIQPYVNKYAISKKDLLPLRTSPDSYRENIIYRIPK EEEEEEEEEHHHHHHHHCHHHEEEEECCCCHHEECCCCCCEEECCCCHHHHCCEEEECCH EAILKIIHIGEETEAGSLKGRWLHALTKDGYKGYVFNYSLEIFDNIPGTILTSPLDQASQ HHEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCEEECCCCCCCC NDIINTFKNIKYLRPLYYEKMIANNTYNTNLLREDYGLFFTPKNEIKINMPELNLHCKFN CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCEEEECCCEEEEEEEE IVEEVKPNGFLFRSETSDEDFIILERETQNYYKSIVKVKEHNFESKFVIIEQNIEKIILE EHHHCCCCCEEEECCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEE AEKQNQNLINRLISYGTLINTQYGNIEFKSDKTFVWETDKKIYNLPSSGTFEIIGLSPNL HHHCCHHHHHHHHHHCCEEECCCCCEEECCCCEEEEECCCEEEECCCCCCEEEEEECCCE QISYKNAVKLMTTEGKEYFCLLDYTNNALQLIFISPESVEDDLIIINDKDKIAIILFNSA EEEECCEEEEEEECCCEEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCEEEEEECCC QPSQDILTKQSQKTT CCCHHHHHCCCCCCC >Mature Secondary Structure MNKKLIYILSIILFLSCFNKNNKYGIVLDSNNREKLPNGSLVKIENTDQEKQIITINYNE CCCEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECC TKFIVHKFTIEEFQTKKEAEKFKLSIQPYVNKYAISKKDLLPLRTSPDSYRENIIYRIPK EEEEEEEEEHHHHHHHHCHHHEEEEECCCCHHEECCCCCCEEECCCCHHHHCCEEEECCH EAILKIIHIGEETEAGSLKGRWLHALTKDGYKGYVFNYSLEIFDNIPGTILTSPLDQASQ HHEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCEEECCCCCCCC NDIINTFKNIKYLRPLYYEKMIANNTYNTNLLREDYGLFFTPKNEIKINMPELNLHCKFN CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCEEEECCCEEEEEEEE IVEEVKPNGFLFRSETSDEDFIILERETQNYYKSIVKVKEHNFESKFVIIEQNIEKIILE EHHHCCCCCEEEECCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEE AEKQNQNLINRLISYGTLINTQYGNIEFKSDKTFVWETDKKIYNLPSSGTFEIIGLSPNL HHHCCHHHHHHHHHHCCEEECCCCCEEECCCCEEEEECCCEEEECCCCCCEEEEEECCCE QISYKNAVKLMTTEGKEYFCLLDYTNNALQLIFISPESVEDDLIIINDKDKIAIILFNSA EEEECCEEEEEEECCCEEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCEEEEEECCC QPSQDILTKQSQKTT CCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]