Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918266
Identifier: 187918266
GI number: 187918266
Start: 413493
End: 414149
Strand: Direct
Name: 187918266
Synonym: BH0399
Alternate gene names: NA
Gene position: 413493-414149 (Clockwise)
Preceding gene: 187918265
Following gene: 187918268
Centisome position: 44.83
GC content: 23.74
Gene sequence:
>657_bases ATGAAAATAATGCGCATACTATTATTAACACAACTGATTACATTCTTAAATGCAAATGAAAACACAACAATAATAAAAGA ATTATCAAAAACAATTTATAATCCTAGTAATAAAGAATATGAAACAAATAAAGAAAGGCTAGATAATTTTATAGAGTCAA TAGATCTAAATAACAACAATATATTAAAAGAGTTACAGAAAATAAAAAATGACCTTCTAATCACATCCGTATATTTCCAA AATATAAAGGGTACTTTAATAGCCCTAAATATCTCAGCAGAAATAAATTTTCAACATAAAATATCTCCACTATCAATTTC GATCATCAATAACGATTTTAACACTACCAAAACATTAATAGACTATGGAATTAAAATCAACAGAATAGACGAAACAGAAT ATCCATCAGTATTTTGGGCAATATACCTAAACAATGAAACAATGTTCAATCTTTTAAAAGAAAAAGGTGCTGATTTAAGC CTCACTCTTAAGAATGGAAAAACACCTATGCAAGCTGCAATAGAAATTGAAAATACTGATTTAATTGAGCTACTACTTAA AAAAAATGCTTATATTAAAGATGAATATAAAAAAGAAATTAAGAACTTAAAAAATAAAAATATAAGAAATATTTTCAAAA AGTATAAAATAATATAA
Upstream 100 bases:
>100_bases TGACAAGGATAAAATCGCAATCATACTGTTTAATAGCGCTCAGCCTAGTCAAGATATACTTACAAAACAATCCCAAAAAA CTACTTAAAGGTTAGAATCA
Downstream 100 bases:
>100_bases AGTAACTAATACCCATCTGACATTTCAATATTTTTATCCTTTTCAAAAAGGTCCTTATATACAAAAGATTTTTTACTAAG CTCTTCCTTTAAATCTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKIMRILLLTQLITFLNANENTTIIKELSKTIYNPSNKEYETNKERLDNFIESIDLNNNNILKELQKIKNDLLITSVYFQ NIKGTLIALNISAEINFQHKISPLSISIINNDFNTTKTLIDYGIKINRIDETEYPSVFWAIYLNNETMFNLLKEKGADLS LTLKNGKTPMQAAIEIENTDLIELLLKKNAYIKDEYKKEIKNLKNKNIRNIFKKYKII
Sequences:
>Translated_218_residues MKIMRILLLTQLITFLNANENTTIIKELSKTIYNPSNKEYETNKERLDNFIESIDLNNNNILKELQKIKNDLLITSVYFQ NIKGTLIALNISAEINFQHKISPLSISIINNDFNTTKTLIDYGIKINRIDETEYPSVFWAIYLNNETMFNLLKEKGADLS LTLKNGKTPMQAAIEIENTDLIELLLKKNAYIKDEYKKEIKNLKNKNIRNIFKKYKII >Mature_218_residues MKIMRILLLTQLITFLNANENTTIIKELSKTIYNPSNKEYETNKERLDNFIESIDLNNNNILKELQKIKNDLLITSVYFQ NIKGTLIALNISAEINFQHKISPLSISIINNDFNTTKTLIDYGIKINRIDETEYPSVFWAIYLNNETMFNLLKEKGADLS LTLKNGKTPMQAAIEIENTDLIELLLKKNAYIKDEYKKEIKNLKNKNIRNIFKKYKII
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 ANK repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25440; Mature: 25440
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIMRILLLTQLITFLNANENTTIIKELSKTIYNPSNKEYETNKERLDNFIESIDLNNNN CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCH ILKELQKIKNDLLITSVYFQNIKGTLIALNISAEINFQHKISPLSISIINNDFNTTKTLI HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCEEEEEEECCCCHHHHHH DYGIKINRIDETEYPSVFWAIYLNNETMFNLLKEKGADLSLTLKNGKTPMQAAIEIENTD HHCCEEEECCCCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCH LIELLLKKNAYIKDEYKKEIKNLKNKNIRNIFKKYKII HHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MKIMRILLLTQLITFLNANENTTIIKELSKTIYNPSNKEYETNKERLDNFIESIDLNNNN CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCH ILKELQKIKNDLLITSVYFQNIKGTLIALNISAEINFQHKISPLSISIINNDFNTTKTLI HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCEEEEEEECCCCHHHHHH DYGIKINRIDETEYPSVFWAIYLNNETMFNLLKEKGADLSLTLKNGKTPMQAAIEIENTD HHCCEEEECCCCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCH LIELLLKKNAYIKDEYKKEIKNLKNKNIRNIFKKYKII HHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]