Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918240
Identifier: 187918240
GI number: 187918240
Start: 386555
End: 387694
Strand: Direct
Name: 187918240
Synonym: BH0374
Alternate gene names: NA
Gene position: 386555-387694 (Clockwise)
Preceding gene: 187918234
Following gene: 187918242
Centisome position: 41.91
GC content: 29.12
Gene sequence:
>1140_bases ATGCAAAGCTTTGATAACCTATCAAAAGATATAAAAAATTTTTCGTATATAATAGATAAAGATTTCTTAGTATGGCCTAA AAACTCGCTTTTAAACCCTATTAACACTGAACTTATTGAAAAATGGGGCTTAAAAAATGCTCTCAAGCTGCAAAGAACGT TCTTTGATGAAACATTAATACGAGAAACAAAAAAACTTATTAATATAGAATATGATGAAGAATCCATTGCCAATTATCAT ATACTAATAAGTAATTTAGAAGAAGTATATGAAACTTGCAAGAAAAACAAAAAAATCTACTATCAAGACGTTCTTCCAAC CATCAAAAAGGTAATGGAATTTTATAAAAAAAATCAACAAACATTCATCAAATATATGAAAGTACCTAAGCTCTTGTCCG ACTACCATGTTGTTCACTCAATAAACACCGCAATACTAACCGTGGCACTTGGAAACGAGATGAATTTAAACAATCATAAG ACAGTTGAACTTTGTACAATAGCTCTTCTGCACAAAATAGGTTTCCTATTTATCCCTTTGAGAATAAGTGAAAAAAAAGA AAAATTAAGCGATGAAGAATTTCAAGTAATCAAAAAATATCCCATACTTGGTTATAAAATACTCTCAACTACTAATTTCT CACAATCTATCTGCCTAGCAATACTAACTCATAAAGAAAACTTAGATGGTTCAGGATACCCTAACAAACTTAAAAGCGAA AAGATAAATATTGAGTCTAATATAATAGGTGCCGCTAGTGCATACAGTGCAATCCTTCTAGAGAAAACATATAAAGGAGC TTTAAACTCTGGTGCATCTCTTATTGAACTAATACAAGATGCTGATAGGAAATTTGACAAAAGGGTTTTAAAACTAATAA TTAAGGTTCTCTCTCAATGTCCTCTAGACTTTATTGTTGAACTTAATGACAATTCAATTGCTAAAATAATAAAAATCAAC GAAATTAATGTTAATGTCCCATATATAAAATACATAATAAAGGATGGCAAAATTGTACCCCCTAGCGAAAATCAAAATTA CGTTAAATCCATACCTAAAACAGAAACGGGAGTAAAAAAAATACTAAGACAAGATGAAATAGAATTTATTTTAAAAAAAT ATGGCTTAAAGGAAATGTAA
Upstream 100 bases:
>100_bases AAATTAATGTATACATGTAGTATTATACTAAATAGATAGACAATTAATAAATAATATGCTAACACACGCTTATTACTAAG TTTGGAGCCTAAGGAGCAAA
Downstream 100 bases:
>100_bases AAGGAGAAAAGTATGATTTTAATAACATCTGCAATGGATGAAGAATCGACAGAGATAAATAAGATTATCGAAAACAAAGA AGAAGTTATATTAGATGAGT
Product: sensory transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MQSFDNLSKDIKNFSYIIDKDFLVWPKNSLLNPINTELIEKWGLKNALKLQRTFFDETLIRETKKLINIEYDEESIANYH ILISNLEEVYETCKKNKKIYYQDVLPTIKKVMEFYKKNQQTFIKYMKVPKLLSDYHVVHSINTAILTVALGNEMNLNNHK TVELCTIALLHKIGFLFIPLRISEKKEKLSDEEFQVIKKYPILGYKILSTTNFSQSICLAILTHKENLDGSGYPNKLKSE KINIESNIIGAASAYSAILLEKTYKGALNSGASLIELIQDADRKFDKRVLKLIIKVLSQCPLDFIVELNDNSIAKIIKIN EINVNVPYIKYIIKDGKIVPPSENQNYVKSIPKTETGVKKILRQDEIEFILKKYGLKEM
Sequences:
>Translated_379_residues MQSFDNLSKDIKNFSYIIDKDFLVWPKNSLLNPINTELIEKWGLKNALKLQRTFFDETLIRETKKLINIEYDEESIANYH ILISNLEEVYETCKKNKKIYYQDVLPTIKKVMEFYKKNQQTFIKYMKVPKLLSDYHVVHSINTAILTVALGNEMNLNNHK TVELCTIALLHKIGFLFIPLRISEKKEKLSDEEFQVIKKYPILGYKILSTTNFSQSICLAILTHKENLDGSGYPNKLKSE KINIESNIIGAASAYSAILLEKTYKGALNSGASLIELIQDADRKFDKRVLKLIIKVLSQCPLDFIVELNDNSIAKIIKIN EINVNVPYIKYIIKDGKIVPPSENQNYVKSIPKTETGVKKILRQDEIEFILKKYGLKEM >Mature_379_residues MQSFDNLSKDIKNFSYIIDKDFLVWPKNSLLNPINTELIEKWGLKNALKLQRTFFDETLIRETKKLINIEYDEESIANYH ILISNLEEVYETCKKNKKIYYQDVLPTIKKVMEFYKKNQQTFIKYMKVPKLLSDYHVVHSINTAILTVALGNEMNLNNHK TVELCTIALLHKIGFLFIPLRISEKKEKLSDEEFQVIKKYPILGYKILSTTNFSQSICLAILTHKENLDGSGYPNKLKSE KINIESNIIGAASAYSAILLEKTYKGALNSGASLIELIQDADRKFDKRVLKLIIKVLSQCPLDFIVELNDNSIAKIIKIN EINVNVPYIKYIIKDGKIVPPSENQNYVKSIPKTETGVKKILRQDEIEFILKKYGLKEM
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43781; Mature: 43781
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSFDNLSKDIKNFSYIIDKDFLVWPKNSLLNPINTELIEKWGLKNALKLQRTFFDETLI CCCHHHHHHHHHHHHHHCCCCEEECCCHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH RETKKLINIEYDEESIANYHILISNLEEVYETCKKNKKIYYQDVLPTIKKVMEFYKKNQQ HHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCHH TFIKYMKVPKLLSDYHVVHSINTAILTVALGNEMNLNNHKTVELCTIALLHKIGFLFIPL HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEEE RISEKKEKLSDEEFQVIKKYPILGYKILSTTNFSQSICLAILTHKENLDGSGYPNKLKSE EECCHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHEEECCCCCCCCCCCCCCCC KINIESNIIGAASAYSAILLEKTYKGALNSGASLIELIQDADRKFDKRVLKLIIKVLSQC EECCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLDFIVELNDNSIAKIIKINEINVNVPYIKYIIKDGKIVPPSENQNYVKSIPKTETGVKK CCEEEEEECCCCEEEEEEEEEEECCCHHEEEEEECCEECCCCCCCHHHHHCCCCHHHHHH ILRQDEIEFILKKYGLKEM HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQSFDNLSKDIKNFSYIIDKDFLVWPKNSLLNPINTELIEKWGLKNALKLQRTFFDETLI CCCHHHHHHHHHHHHHHCCCCEEECCCHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH RETKKLINIEYDEESIANYHILISNLEEVYETCKKNKKIYYQDVLPTIKKVMEFYKKNQQ HHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCHH TFIKYMKVPKLLSDYHVVHSINTAILTVALGNEMNLNNHKTVELCTIALLHKIGFLFIPL HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEEE RISEKKEKLSDEEFQVIKKYPILGYKILSTTNFSQSICLAILTHKENLDGSGYPNKLKSE EECCHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHEEECCCCCCCCCCCCCCCC KINIESNIIGAASAYSAILLEKTYKGALNSGASLIELIQDADRKFDKRVLKLIIKVLSQC EECCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLDFIVELNDNSIAKIIKINEINVNVPYIKYIIKDGKIVPPSENQNYVKSIPKTETGVKK CCEEEEEECCCCEEEEEEEEEEECCCHHEEEEEECCEECCCCCCCHHHHHCCCCHHHHHH ILRQDEIEFILKKYGLKEM HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]