Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918137
Identifier: 187918137
GI number: 187918137
Start: 279225
End: 279728
Strand: Direct
Name: 187918137
Synonym: BH0263
Alternate gene names: NA
Gene position: 279225-279728 (Clockwise)
Preceding gene: 187918135
Following gene: 187918188
Centisome position: 30.27
GC content: 26.79
Gene sequence:
>504_bases ATGATCAAATTCCATAAACAAGTATTAATACCCATTTTACTAGCTTCAATAGTAATGATAGCAATCATTAAAATATCTCT GTCTTTTCATTTAGTCAAAGGTTCTTCAATGTTACCAATAATTTTAGAAAAACATTGGATCATAAATAATAAACTAGCTT ATGGACTTAGACTAAAGAATAGGGAAACATACATCATATTATGGGGCACACCCAAAAAAAACGAAATGGTACTTATTAAA GACCCTATAACAAAAAAAACATCTGTTAAAAAAATTTTTGCCATTCCAGGAGAAAAATTTACAAAGTTAAACAAAAATGT AATATCCATACATAATTTAACCTTTAATATAAATAAAGAACATCTAAAAAAATTAGAAAGTATATATATCCCAAAGGGTT ATTACCTAGTAATAGGAGAGAATAGACAAGTCTCCCTTGATTCAAGAGAATACGGGTTTATCAATATCAATGACATTATT GGAAAAATAATATACTGCCTGTAA
Upstream 100 bases:
>100_bases TTCTGGTCCTTTTTTGGTATAATCATGATATGCCTTATTATACAATATACACTAGAAATTTCAATTTCTTAAAAAGTCTC AAGTGGATATTTTTTAAGAA
Downstream 100 bases:
>100_bases ACCCTCAAATAATAAAAATTAATATTTCTCAATATTAATCTAAATAAATGCTTAAAGCAATTCCATTTTCTCTTCTAACT CATCACTCGAGCTAATATCT
Product: signal peptidase I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MIKFHKQVLIPILLASIVMIAIIKISLSFHLVKGSSMLPIILEKHWIINNKLAYGLRLKNRETYIILWGTPKKNEMVLIK DPITKKTSVKKIFAIPGEKFTKLNKNVISIHNLTFNINKEHLKKLESIYIPKGYYLVIGENRQVSLDSREYGFININDII GKIIYCL
Sequences:
>Translated_167_residues MIKFHKQVLIPILLASIVMIAIIKISLSFHLVKGSSMLPIILEKHWIINNKLAYGLRLKNRETYIILWGTPKKNEMVLIK DPITKKTSVKKIFAIPGEKFTKLNKNVISIHNLTFNINKEHLKKLESIYIPKGYYLVIGENRQVSLDSREYGFININDII GKIIYCL >Mature_167_residues MIKFHKQVLIPILLASIVMIAIIKISLSFHLVKGSSMLPIILEKHWIINNKLAYGLRLKNRETYIILWGTPKKNEMVLIK DPITKKTSVKKIFAIPGEKFTKLNKNVISIHNLTFNINKEHLKKLESIYIPKGYYLVIGENRQVSLDSREYGFININDII GKIIYCL
Specific function: Unknown
COG id: COG0681
COG function: function code U; Signal peptidase I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.21.89
Molecular weight: Translated: 19317; Mature: 19317
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFHKQVLIPILLASIVMIAIIKISLSFHLVKGSSMLPIILEKHWIINNKLAYGLRLKN CCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECEEEECCCEEEEEEECC RETYIILWGTPKKNEMVLIKDPITKKTSVKKIFAIPGEKFTKLNKNVISIHNLTFNINKE CCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHCCCCEEEEEEEEEEECHH HLKKLESIYIPKGYYLVIGENRQVSLDSREYGFININDIIGKIIYCL HHHHHHHEECCCCEEEEEECCCEEEECCCCCCEEEHHHHHHHHHHCC >Mature Secondary Structure MIKFHKQVLIPILLASIVMIAIIKISLSFHLVKGSSMLPIILEKHWIINNKLAYGLRLKN CCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECEEEECCCEEEEEEECC RETYIILWGTPKKNEMVLIKDPITKKTSVKKIFAIPGEKFTKLNKNVISIHNLTFNINKE CCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHCCCCEEEEEEEEEEECHH HLKKLESIYIPKGYYLVIGENRQVSLDSREYGFININDIIGKIIYCL HHHHHHHEECCCCEEEEEECCCEEEECCCCCCEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA