Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is dedA [C]
Identifier: 187918123
GI number: 187918123
Start: 257559
End: 258167
Strand: Direct
Name: dedA [C]
Synonym: BH0250
Alternate gene names: 187918123
Gene position: 257559-258167 (Clockwise)
Preceding gene: 187918122
Following gene: 187918124
Centisome position: 27.93
GC content: 27.26
Gene sequence:
>609_bases ATGCATATCATACTAGAATTTATAGATCTCAATATAAACTATTCGCCAATTGTATTTTTTGGACTACTTATCCTTGCAGG TTTTAACATTCCAATTTCTGAAGATGCAATAGTGATAATGGGAGGCATACTTTCTAGTCGAAAAAATGAGTATACAATCT TAATATTCCTAGGAATTTTCTGGGGCGCCTATATTGGAGATGTAATTTCATTTTATATAGGTAGATTCTTAGCTAATAAA TTACTTAAACAAAAAACACAAACAAATAAACTAATCGATAAGATGAATTACTACTATAAACGCTATGGAAATTTAACTTT ATTATTTGGAAGATTTATCCCATTTGGAGTTAGAAACGCAATATTTATATCAGCAGGAATGGGAAACATGCGTATTAGCA ACTTTCTTATAACTGACTTTTTTGCAGCCATGATATCAATTACAACTTACTTCACATTAAGTTTTAAAATAGGTGAATCG TTTAAAATAATATTTCCCAAAATCAGGCTAATATTACTAATAACACTTATCATAATCACAATACTAATTTTAATAAGTTA CATTATAAGAAAGAAAAAAATTCAAAAAGTTGACAAACTTTTTGAATAG
Upstream 100 bases:
>100_bases TTTAAAGATAGGCAAAACACTAATAATTCTTTACTGTTTATACCTAATTCTAATGAGCACATATTTAACTTACAAGACAA GAAAAAAATAACGAGGCATT
Downstream 100 bases:
>100_bases CAAATATAATGTATATGCGCTGTGGTGGTGGAAGTGGTATACACGCTAGCTTGAGGGGCTAGTGGGCGGTAAGCCCATGC TGGTTCAAGTCCAGTCCACA
Product: alkaline phosphatase like protein
Products: NA
Alternate protein names: DedA Family Protein; Alkaline Phosphatase Like Protein
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MHIILEFIDLNINYSPIVFFGLLILAGFNIPISEDAIVIMGGILSSRKNEYTILIFLGIFWGAYIGDVISFYIGRFLANK LLKQKTQTNKLIDKMNYYYKRYGNLTLLFGRFIPFGVRNAIFISAGMGNMRISNFLITDFFAAMISITTYFTLSFKIGES FKIIFPKIRLILLITLIIITILILISYIIRKKKIQKVDKLFE
Sequences:
>Translated_202_residues MHIILEFIDLNINYSPIVFFGLLILAGFNIPISEDAIVIMGGILSSRKNEYTILIFLGIFWGAYIGDVISFYIGRFLANK LLKQKTQTNKLIDKMNYYYKRYGNLTLLFGRFIPFGVRNAIFISAGMGNMRISNFLITDFFAAMISITTYFTLSFKIGES FKIIFPKIRLILLITLIIITILILISYIIRKKKIQKVDKLFE >Mature_202_residues MHIILEFIDLNINYSPIVFFGLLILAGFNIPISEDAIVIMGGILSSRKNEYTILIFLGIFWGAYIGDVISFYIGRFLANK LLKQKTQTNKLIDKMNYYYKRYGNLTLLFGRFIPFGVRNAIFISAGMGNMRISNFLITDFFAAMISITTYFTLSFKIGES FKIIFPKIRLILLITLIIITILILISYIIRKKKIQKVDKLFE
Specific function: Unknown
COG id: COG0586
COG function: function code S; Uncharacterized membrane-associated protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23315; Mature: 23315
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIILEFIDLNINYSPIVFFGLLILAGFNIPISEDAIVIMGGILSSRKNEYTILIFLGIF CEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHEEEHHHHHCCCCCEEEEHHHHHH WGAYIGDVISFYIGRFLANKLLKQKTQTNKLIDKMNYYYKRYGNLTLLFGRFIPFGVRNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCCCCCCE IFISAGMGNMRISNFLITDFFAAMISITTYFTLSFKIGESFKIIFPKIRLILLITLIIIT EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEHHHHHHHHHHHHHHHHHH ILILISYIIRKKKIQKVDKLFE HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHIILEFIDLNINYSPIVFFGLLILAGFNIPISEDAIVIMGGILSSRKNEYTILIFLGIF CEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHEEEHHHHHCCCCCEEEEHHHHHH WGAYIGDVISFYIGRFLANKLLKQKTQTNKLIDKMNYYYKRYGNLTLLFGRFIPFGVRNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCCCCCCE IFISAGMGNMRISNFLITDFFAAMISITTYFTLSFKIGESFKIIFPKIRLILLITLIIIT EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEHHHHHHHHHHHHHHHHHH ILILISYIIRKKKIQKVDKLFE HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA